Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198608

Identifier: 87198608

GI number: 87198608

Start: 630495

End: 631238

Strand: Reverse

Name: 87198608

Synonym: Saro_0584

Alternate gene names: NA

Gene position: 631238-630495 (Counterclockwise)

Preceding gene: 87198614

Following gene: 87198607

Centisome position: 17.72

GC content: 67.2

Gene sequence:

>744_bases
ATGACGCCGTGCGACCGTGAAAAGCCGCGGCCTGTTTCGGGAAACCTGCTCGTGATTGTTCAAATTGTGATCCTGGCGAT
GATCGCGGCCTTCCTCGGCCTGCGCCTCTATTCGGTGCTCGGCCGCCGCCCAGAGCGTGACGAGGAACCTATGCGCCGCC
GGATCGAACAGCCCGATCCCTCTGCCAAGCCGCACCAGCCCGGCTCGATGGGCAATGCCCGCAGCGCAGAGACCGGTGCG
CTCGCTCCCCGCCCGCGCGAGCTGGCCGCTCCCGAAGCACAGACCTTCGACAACAGCGCCGAAGCCGGCGTGCGCGCGAT
CATCGCTGCCGACCGCCGCTTCGACGTGGCCCAGTTCCTCGCCGGAGCCAAGGGCGCCTACGGCATGATCCTCGAAGCGT
TCTGGCGCGGCGACAAGGAAGAGCTGGCCCAGCTTTGCGACGCCGACGTCTATGAAGGCTTTGCCTCGGCCATCGACGCC
CGCGCGAACGCCGGCGAAACGATCGACGCCCGCCTGATCCGCATCGAGGAAGCGCGCATCATCGGTGCTTCCATCGAAGG
TACGACGGCGCGCATCGCGGTCCGCTTCCTCGCCGACATCGCTTCGGTCACGCGCAATGCCGAAGGGCATGTCGTCGCCG
GTTCGCTCGACGACGCTATCGACGCGCGCGACCTGTGGACCTTCCGCCGCGATCTGACCTCGCGCGATCCTGACTGGCTG
CTCGACGAGACCGACGAAGCCTGA

Upstream 100 bases:

>100_bases
ATTCGCAACGCCCCGGCGAGATTCTTGCCCACGTGGTCCGCCCAAAGGGTCATCCACGCGTTGTTCATTTGTAATTCGTA
CCTATTTGAGGCACGTTGGA

Downstream 100 bases:

>100_bases
GGGGCAAGGTGTCCGGGGGACAATCGACCGCCAGGTCCACCACTTCGGTCGGGCTGCTGCTCGGCCTGACGCTGCTGGGC
GGCTGCGTGCGACTGGTCCC

Product: import inner membrane translocase subunit Tim44

Products: NA

Alternate protein names: Translocase Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase; Tim44 Domain-Containing Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Transporter Protein; Tim44 Family Protein; Tim44-Like Domain Family; Import Inner Membrane Translocase; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein; Membrane Associated Transporter Protein; Tim44-Like Domain Superfamily; Tim44-Like Domain Containing Protein

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDPSAKPHQPGSMGNARSAETGA
LAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFLAGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDA
RANAGETIDARLIRIEEARIIGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWL
LDETDEA

Sequences:

>Translated_247_residues
MTPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDPSAKPHQPGSMGNARSAETGA
LAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFLAGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDA
RANAGETIDARLIRIEEARIIGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWL
LDETDEA
>Mature_246_residues
TPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDPSAKPHQPGSMGNARSAETGAL
APRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFLAGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDAR
ANAGETIDARLIRIEEARIIGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWLL
DETDEA

Specific function: Unknown

COG id: COG4395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26983; Mature: 26852

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCC
SAKPHQPGSMGNARSAETGALAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCHHHHHHHHHHCCCCHHHHHHH
AGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDARANAGETIDARLIRIEEARI
HCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHEEEEHHEE
IGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWL
EECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
LDETDEA
CCCCCCC
>Mature Secondary Structure 
TPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCC
SAKPHQPGSMGNARSAETGALAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCHHHHHHHHHHCCCCHHHHHHH
AGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDARANAGETIDARLIRIEEARI
HCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHEEEEHHEE
IGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWL
EECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
LDETDEA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA