| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87198608
Identifier: 87198608
GI number: 87198608
Start: 630495
End: 631238
Strand: Reverse
Name: 87198608
Synonym: Saro_0584
Alternate gene names: NA
Gene position: 631238-630495 (Counterclockwise)
Preceding gene: 87198614
Following gene: 87198607
Centisome position: 17.72
GC content: 67.2
Gene sequence:
>744_bases ATGACGCCGTGCGACCGTGAAAAGCCGCGGCCTGTTTCGGGAAACCTGCTCGTGATTGTTCAAATTGTGATCCTGGCGAT GATCGCGGCCTTCCTCGGCCTGCGCCTCTATTCGGTGCTCGGCCGCCGCCCAGAGCGTGACGAGGAACCTATGCGCCGCC GGATCGAACAGCCCGATCCCTCTGCCAAGCCGCACCAGCCCGGCTCGATGGGCAATGCCCGCAGCGCAGAGACCGGTGCG CTCGCTCCCCGCCCGCGCGAGCTGGCCGCTCCCGAAGCACAGACCTTCGACAACAGCGCCGAAGCCGGCGTGCGCGCGAT CATCGCTGCCGACCGCCGCTTCGACGTGGCCCAGTTCCTCGCCGGAGCCAAGGGCGCCTACGGCATGATCCTCGAAGCGT TCTGGCGCGGCGACAAGGAAGAGCTGGCCCAGCTTTGCGACGCCGACGTCTATGAAGGCTTTGCCTCGGCCATCGACGCC CGCGCGAACGCCGGCGAAACGATCGACGCCCGCCTGATCCGCATCGAGGAAGCGCGCATCATCGGTGCTTCCATCGAAGG TACGACGGCGCGCATCGCGGTCCGCTTCCTCGCCGACATCGCTTCGGTCACGCGCAATGCCGAAGGGCATGTCGTCGCCG GTTCGCTCGACGACGCTATCGACGCGCGCGACCTGTGGACCTTCCGCCGCGATCTGACCTCGCGCGATCCTGACTGGCTG CTCGACGAGACCGACGAAGCCTGA
Upstream 100 bases:
>100_bases ATTCGCAACGCCCCGGCGAGATTCTTGCCCACGTGGTCCGCCCAAAGGGTCATCCACGCGTTGTTCATTTGTAATTCGTA CCTATTTGAGGCACGTTGGA
Downstream 100 bases:
>100_bases GGGGCAAGGTGTCCGGGGGACAATCGACCGCCAGGTCCACCACTTCGGTCGGGCTGCTGCTCGGCCTGACGCTGCTGGGC GGCTGCGTGCGACTGGTCCC
Product: import inner membrane translocase subunit Tim44
Products: NA
Alternate protein names: Translocase Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase; Tim44 Domain-Containing Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Transporter Protein; Tim44 Family Protein; Tim44-Like Domain Family; Import Inner Membrane Translocase; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein; Membrane Associated Transporter Protein; Tim44-Like Domain Superfamily; Tim44-Like Domain Containing Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDPSAKPHQPGSMGNARSAETGA LAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFLAGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDA RANAGETIDARLIRIEEARIIGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWL LDETDEA
Sequences:
>Translated_247_residues MTPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDPSAKPHQPGSMGNARSAETGA LAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFLAGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDA RANAGETIDARLIRIEEARIIGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWL LDETDEA >Mature_246_residues TPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDPSAKPHQPGSMGNARSAETGAL APRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFLAGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDAR ANAGETIDARLIRIEEARIIGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWLL DETDEA
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26983; Mature: 26852
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCC SAKPHQPGSMGNARSAETGALAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFL CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCHHHHHHHHHHCCCCHHHHHHH AGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDARANAGETIDARLIRIEEARI HCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHEEEEHHEE IGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWL EECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCC LDETDEA CCCCCCC >Mature Secondary Structure TPCDREKPRPVSGNLLVIVQIVILAMIAAFLGLRLYSVLGRRPERDEEPMRRRIEQPDP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCC SAKPHQPGSMGNARSAETGALAPRPRELAAPEAQTFDNSAEAGVRAIIAADRRFDVAQFL CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCCHHHHHHHHHHCCCCHHHHHHH AGAKGAYGMILEAFWRGDKEELAQLCDADVYEGFASAIDARANAGETIDARLIRIEEARI HCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHEEEEHHEE IGASIEGTTARIAVRFLADIASVTRNAEGHVVAGSLDDAIDARDLWTFRRDLTSRDPDWL EECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCC LDETDEA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA