| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198151
Identifier: 87198151
GI number: 87198151
Start: 127423
End: 128208
Strand: Direct
Name: 87198151
Synonym: Saro_0125
Alternate gene names: NA
Gene position: 127423-128208 (Clockwise)
Preceding gene: 87198150
Following gene: 87198153
Centisome position: 3.58
GC content: 63.74
Gene sequence:
>786_bases ATGTTGCAATCCTTCGTTCGTGCAATGGCAGGCGTCGCCGTTCTCGGCATTGCCACCATGCTTGGAGGCTGCGATGCCGC CAATGTCTCGTTCAATGGCAAGAAGGGCGTGCCCCTGCCCGAGCTTGACCTGAGCGGCCCCGCCCCGACCACTATTGCCC TTCTCGGTCCCGACAATGTCCGCGTCACGCAGGGCGAAAAGCTGACGATCACGGTGGAAGGCGAAGGGGCCGACAAGCTG CGCTTTGCCCTGTCCGACGGCCAGCTCGGGATCACGCGGGAGGATCTGAAGCTGGGGTCTTCGAACGGTTCTGCGACCGT CAACGTGACCGTCCCCGCGCTTAGCGAGATCATGCTGGCAGGATCCGGAAACCTTACCGCCGATCAGGTCGGTGGCGCCG GAGAGGCCAAGATCGTGGTTGCGGGTTCTGGCACCGTCGACGCACGTGCGATCGACACGAAGTCGCTGAAGGTCGACGTG GTCGGTTCTGGCAAGCTGCGTGCGGCGGGCAAGGCCAAGGAAATGAAGATGACCGTCGCGGGCAGCGGTGATGCCGAAAT GGACGGCCTCAACGTCGACGAGGCAAAGGTCGACGTCGCCGGTTCGGGCAATGCCCGCTTCGCCTCCAACGGGCACGTCA ATGCCAGCATCATGGGATCAGGCGAAGTCCGAGTATTCGGCCGCGCCACGTGCCGGGTAAAATCGATGGGATCGGGCAAG CTGGTCTGCGAAGGCGGCGTCACGCCTGAGAGCGGCAGCACCGAATCCGCCGCGGGAGAACAGTGA
Upstream 100 bases:
>100_bases CATCTCACGGCCGACGAACCGGCGCTGCCGCTCCACGAACGACTTGGCCCTGATCGTATCGCCGTGTTATATCAGCAATA CAGTCAGGAGAGAATTCGCC
Downstream 100 bases:
>100_bases TCTTCAGGCTGCGGCGCGCCGCAGCCTGTCGTTGATGGCCGTACCGATTCCTTCATCAGGAATCGGCGCGACCGCAATCG CCGGTTCGGATGCTGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MLQSFVRAMAGVAVLGIATMLGGCDAANVSFNGKKGVPLPELDLSGPAPTTIALLGPDNVRVTQGEKLTITVEGEGADKL RFALSDGQLGITREDLKLGSSNGSATVNVTVPALSEIMLAGSGNLTADQVGGAGEAKIVVAGSGTVDARAIDTKSLKVDV VGSGKLRAAGKAKEMKMTVAGSGDAEMDGLNVDEAKVDVAGSGNARFASNGHVNASIMGSGEVRVFGRATCRVKSMGSGK LVCEGGVTPESGSTESAAGEQ
Sequences:
>Translated_261_residues MLQSFVRAMAGVAVLGIATMLGGCDAANVSFNGKKGVPLPELDLSGPAPTTIALLGPDNVRVTQGEKLTITVEGEGADKL RFALSDGQLGITREDLKLGSSNGSATVNVTVPALSEIMLAGSGNLTADQVGGAGEAKIVVAGSGTVDARAIDTKSLKVDV VGSGKLRAAGKAKEMKMTVAGSGDAEMDGLNVDEAKVDVAGSGNARFASNGHVNASIMGSGEVRVFGRATCRVKSMGSGK LVCEGGVTPESGSTESAAGEQ >Mature_261_residues MLQSFVRAMAGVAVLGIATMLGGCDAANVSFNGKKGVPLPELDLSGPAPTTIALLGPDNVRVTQGEKLTITVEGEGADKL RFALSDGQLGITREDLKLGSSNGSATVNVTVPALSEIMLAGSGNLTADQVGGAGEAKIVVAGSGTVDARAIDTKSLKVDV VGSGKLRAAGKAKEMKMTVAGSGDAEMDGLNVDEAKVDVAGSGNARFASNGHVNASIMGSGEVRVFGRATCRVKSMGSGK LVCEGGVTPESGSTESAAGEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26023; Mature: 26023
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQSFVRAMAGVAVLGIATMLGGCDAANVSFNGKKGVPLPELDLSGPAPTTIALLGPDNV CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCE RVTQGEKLTITVEGEGADKLRFALSDGQLGITREDLKLGSSNGSATVNVTVPALSEIMLA EEECCCEEEEEEECCCCCEEEEEEECCCCCEEHHHEEECCCCCCEEEEEECCCCEEEEEE GSGNLTADQVGGAGEAKIVVAGSGTVDARAIDTKSLKVDVVGSGKLRAAGKAKEMKMTVA CCCCCCHHHCCCCCCEEEEEEECCCEEEEEEECCCEEEEEEECCCEEECCCCEEEEEEEE GSGDAEMDGLNVDEAKVDVAGSGNARFASNGHVNASIMGSGEVRVFGRATCRVKSMGSGK CCCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCEEEEEEEEEEEEECCCCE LVCEGGVTPESGSTESAAGEQ EEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLQSFVRAMAGVAVLGIATMLGGCDAANVSFNGKKGVPLPELDLSGPAPTTIALLGPDNV CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCE RVTQGEKLTITVEGEGADKLRFALSDGQLGITREDLKLGSSNGSATVNVTVPALSEIMLA EEECCCEEEEEEECCCCCEEEEEEECCCCCEEHHHEEECCCCCCEEEEEECCCCEEEEEE GSGNLTADQVGGAGEAKIVVAGSGTVDARAIDTKSLKVDVVGSGKLRAAGKAKEMKMTVA CCCCCCHHHCCCCCCEEEEEEECCCEEEEEEECCCEEEEEEECCCEEECCCCEEEEEEEE GSGDAEMDGLNVDEAKVDVAGSGNARFASNGHVNASIMGSGEVRVFGRATCRVKSMGSGK CCCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCEEEEEEEEEEEEECCCCE LVCEGGVTPESGSTESAAGEQ EEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA