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The map label for this gene is mmgC [H]

Identifier: 87198153

GI number: 87198153

Start: 129220

End: 130938

Strand: Direct

Name: mmgC [H]

Synonym: Saro_0127

Alternate gene names: 87198153

Gene position: 129220-130938 (Clockwise)

Preceding gene: 87198151

Following gene: 87198154

Centisome position: 3.63

GC content: 64.81

Gene sequence:

>1719_bases
ATGAGCTTCACGCCGCCCACTGCCGACCAGATCCTTGCGATCCGGGTGAGCGCCGGCATCGACGAACTTGCACAAAGCGA
GCGCTTTGCCGCAGCTACGCCCGATCTGGTCGAGGCCATCGTCGAAGGCATTGGTGCCTTCGCAGCCGGAGAATGGGCTC
CCCTTCACCGCGCGGGGGATCAGGTTGGCGCCAAGTGTGGCAACGGCAGGGTCACCCTCCCTGCGGGTTACGTCGAGGCC
TACAGGAGCTTCGTCGAGCAAGGCTGGGGATCGATCAACGGCCCGGTCGATTTCGGCGGCCAGGGCTTGCCCTTTACGCT
CGCCACGGCAGTTCTCGAAACGCTGGGTGCGGCCAACATGGGCTTCACGCTTCTCCCGATCCTCACCGTCGGAGCGATCG
AAGCGTTGGACCATCACGGCAGCGAAGCGCAGAAAGCGCTCTATCTGCCCAAGCTGATCTCGGGCGAATGGTCGGGCACG
ATGAACCTGACCGAACCGCAGGCCGGTTCCGACGTCGGCGCGCTGCGCTCCACCGCAACGCCGATCACCGAAGGCCCCCA
CGCGGGGAAGTACCGGATCGCCGGGACCAAGATCTTCATCACCTTTGGCGAACACGACGCCGCCGAAAACATCATCCATC
TAGTTCTCGCGCGCACGCCGGGCGCGCCTGACGGATCGCGTGGCATCTCGCTGTTCATCGTGCCGAAGTTCCACGTGGAA
CAGGACGGCAGCCTTGGCGCGCGCAACGACGTGCGCTGCGTCTCCATCGAACACAAGCTCGGCATTCATGCCTCGCCTAC
TTGCGTCATGTCCTATGGCGACAACGGTGAATGCATCGGCGAGATGGTCGGTCACGAGAACGGCGGGCTGCGCGCTATGT
TCACGATGATGAACTCGGCCCGCATCAATGTCGGCAGCCAGGGCGTGCAGATTGCCGAACGGGCGTTCCAGCAGGCTCGC
ACTTATGCTCGCGACCGTGTGCAGTCCACCCGCGCCGGGGCACCTGGCAAGAATCCCGTGGCGATCATCGAACATCCAGA
CGTGCGCCGCATGCTCATGCGGATGCGCGCGCTGACAGAGGGGAGCCGTGCCCTGCTCTACTACACCGCCGGTCAGGTCG
ATCGCGGCGCATTGGGCAACGAGGCAGCGCAGAAGCGTGCCGAGCTGCTTGTGCCGATGCTCAAGGCCTGGGGCACCGAC
ATCGGCTGCGAGGTCGCCAGCCTGGGTATCCAGGTTCACGGCGGCATGGGCTTCATCGAGGAGACCGGCGCCGCGCAGCA
CCTGCGCGATTCGCGCATCGCGCCGATCTACGAAGGCACAAACGGCATCCAGGCCGCCGACCTTGTGACCCGCAAGCTCG
GCTACGACAACGGTGGTGTGCTCCAGGCGCTGATGGCCGAGATTGCCGCAGAGATGGAGGACGTACCGGAAGTCGCGGCA
TTGGCGAAGGATGCCGCTGCAATCGGCCAGTGGATGAGCAGCACGGCGTCGCTTGACGACAAGCTGGCGGGATCGGTCCC
GTTCACCACGATGTGTGCGGTAGCCGTCGCCGGTTGGCAGCTCGCCCGCCAGTCGCGCGCGTCGGACCTGCACAGCAAGA
TTGCGGTGACTAAGTTCTTCAACCGCGTGATCGTGCCCGAAGCGCGTGGCTTGGGCTCGTCGGCTATGGCCGGTGCCGCT
CTGCTCTACGATCTCGACGCTGATGCGCTAGCTGGATGA

Upstream 100 bases:

>100_bases
TGTCGGGCGGGTGCACCTTGGAAGGCTTTGTCGGCTCCATATCGGTTCGCTATAGGGAGCGCGCACGCCCGCGCCAAGCG
CCGCGCTTGAGGAGAGACCC

Downstream 100 bases:

>100_bases
CCGAGGCGCTTCTCACCCGGATAGCGGATGCGCTTGATCGCCTGGTCCCGCCGCGCGCGCAATCGGCGGACTGGCGCGCG
TTTCCGGCCTATGTCTGGGA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 571

Protein sequence:

>572_residues
MSFTPPTADQILAIRVSAGIDELAQSERFAAATPDLVEAIVEGIGAFAAGEWAPLHRAGDQVGAKCGNGRVTLPAGYVEA
YRSFVEQGWGSINGPVDFGGQGLPFTLATAVLETLGAANMGFTLLPILTVGAIEALDHHGSEAQKALYLPKLISGEWSGT
MNLTEPQAGSDVGALRSTATPITEGPHAGKYRIAGTKIFITFGEHDAAENIIHLVLARTPGAPDGSRGISLFIVPKFHVE
QDGSLGARNDVRCVSIEHKLGIHASPTCVMSYGDNGECIGEMVGHENGGLRAMFTMMNSARINVGSQGVQIAERAFQQAR
TYARDRVQSTRAGAPGKNPVAIIEHPDVRRMLMRMRALTEGSRALLYYTAGQVDRGALGNEAAQKRAELLVPMLKAWGTD
IGCEVASLGIQVHGGMGFIEETGAAQHLRDSRIAPIYEGTNGIQAADLVTRKLGYDNGGVLQALMAEIAAEMEDVPEVAA
LAKDAAAIGQWMSSTASLDDKLAGSVPFTTMCAVAVAGWQLARQSRASDLHSKIAVTKFFNRVIVPEARGLGSSAMAGAA
LLYDLDADALAG

Sequences:

>Translated_572_residues
MSFTPPTADQILAIRVSAGIDELAQSERFAAATPDLVEAIVEGIGAFAAGEWAPLHRAGDQVGAKCGNGRVTLPAGYVEA
YRSFVEQGWGSINGPVDFGGQGLPFTLATAVLETLGAANMGFTLLPILTVGAIEALDHHGSEAQKALYLPKLISGEWSGT
MNLTEPQAGSDVGALRSTATPITEGPHAGKYRIAGTKIFITFGEHDAAENIIHLVLARTPGAPDGSRGISLFIVPKFHVE
QDGSLGARNDVRCVSIEHKLGIHASPTCVMSYGDNGECIGEMVGHENGGLRAMFTMMNSARINVGSQGVQIAERAFQQAR
TYARDRVQSTRAGAPGKNPVAIIEHPDVRRMLMRMRALTEGSRALLYYTAGQVDRGALGNEAAQKRAELLVPMLKAWGTD
IGCEVASLGIQVHGGMGFIEETGAAQHLRDSRIAPIYEGTNGIQAADLVTRKLGYDNGGVLQALMAEIAAEMEDVPEVAA
LAKDAAAIGQWMSSTASLDDKLAGSVPFTTMCAVAVAGWQLARQSRASDLHSKIAVTKFFNRVIVPEARGLGSSAMAGAA
LLYDLDADALAG
>Mature_571_residues
SFTPPTADQILAIRVSAGIDELAQSERFAAATPDLVEAIVEGIGAFAAGEWAPLHRAGDQVGAKCGNGRVTLPAGYVEAY
RSFVEQGWGSINGPVDFGGQGLPFTLATAVLETLGAANMGFTLLPILTVGAIEALDHHGSEAQKALYLPKLISGEWSGTM
NLTEPQAGSDVGALRSTATPITEGPHAGKYRIAGTKIFITFGEHDAAENIIHLVLARTPGAPDGSRGISLFIVPKFHVEQ
DGSLGARNDVRCVSIEHKLGIHASPTCVMSYGDNGECIGEMVGHENGGLRAMFTMMNSARINVGSQGVQIAERAFQQART
YARDRVQSTRAGAPGKNPVAIIEHPDVRRMLMRMRALTEGSRALLYYTAGQVDRGALGNEAAQKRAELLVPMLKAWGTDI
GCEVASLGIQVHGGMGFIEETGAAQHLRDSRIAPIYEGTNGIQAADLVTRKLGYDNGGVLQALMAEIAAEMEDVPEVAAL
AKDAAAIGQWMSSTASLDDKLAGSVPFTTMCAVAVAGWQLARQSRASDLHSKIAVTKFFNRVIVPEARGLGSSAMAGAAL
LYDLDADALAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=373, Percent_Identity=28.4182305630027, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI4501857, Length=379, Percent_Identity=25.3298153034301, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI7656849, Length=408, Percent_Identity=26.9607843137255, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI4501859, Length=369, Percent_Identity=26.2872628726287, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI4557235, Length=368, Percent_Identity=26.9021739130435, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI76496475, Length=368, Percent_Identity=26.9021739130435, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI226958414, Length=371, Percent_Identity=28.0323450134771, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4557233, Length=358, Percent_Identity=29.0502793296089, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI226958412, Length=372, Percent_Identity=28.2258064516129, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4557231, Length=308, Percent_Identity=25.974025974026, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI187960098, Length=308, Percent_Identity=25.974025974026, Blast_Score=77, Evalue=6e-14,
Organism=Escherichia coli, GI87082384, Length=289, Percent_Identity=31.1418685121107, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87081958, Length=369, Percent_Identity=27.10027100271, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786223, Length=418, Percent_Identity=24.8803827751196, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17533517, Length=421, Percent_Identity=27.3159144893112, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=363, Percent_Identity=28.6501377410468, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71985184, Length=368, Percent_Identity=27.1739130434783, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=26.790450928382, Blast_Score=108, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17551932, Length=450, Percent_Identity=24.6666666666667, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI86563383, Length=338, Percent_Identity=28.4023668639053, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=338, Percent_Identity=28.4023668639053, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=412, Percent_Identity=27.4271844660194, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17505929, Length=373, Percent_Identity=26.5415549597855, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17569725, Length=354, Percent_Identity=27.4011299435028, Blast_Score=86, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=353, Percent_Identity=26.628895184136, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=369, Percent_Identity=24.390243902439, Blast_Score=79, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=238, Percent_Identity=28.1512605042017, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=328, Percent_Identity=24.6951219512195, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=286, Percent_Identity=26.2237762237762, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281363737, Length=367, Percent_Identity=28.3378746594005, Blast_Score=113, Evalue=4e-25,
Organism=Drosophila melanogaster, GI21356377, Length=366, Percent_Identity=30.0546448087432, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24646207, Length=417, Percent_Identity=27.0983213429257, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24666513, Length=370, Percent_Identity=27.8378378378378, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI21355753, Length=377, Percent_Identity=28.3819628647215, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24660351, Length=379, Percent_Identity=26.9129287598945, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 60129; Mature: 59998

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTPPTADQILAIRVSAGIDELAQSERFAAATPDLVEAIVEGIGAFAAGEWAPLHRAGD
CCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCH
QVGAKCGNGRVTLPAGYVEAYRSFVEQGWGSINGPVDFGGQGLPFTLATAVLETLGAANM
HHCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
GFTLLPILTVGAIEALDHHGSEAQKALYLPKLISGEWSGTMNLTEPQAGSDVGALRSTAT
CHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCC
PITEGPHAGKYRIAGTKIFITFGEHDAAENIIHLVLARTPGAPDGSRGISLFIVPKFHVE
CCCCCCCCCEEEEECEEEEEEECCCHHHHHHHHHHEECCCCCCCCCCCEEEEEEEEEEEC
QDGSLGARNDVRCVSIEHKLGIHASPTCVMSYGDNGECIGEMVGHENGGLRAMFTMMNSA
CCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEHEEHHHCC
RINVGSQGVQIAERAFQQARTYARDRVQSTRAGAPGKNPVAIIEHPDVRRMLMRMRALTE
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCC
GSRALLYYTAGQVDRGALGNEAAQKRAELLVPMLKAWGTDIGCEVASLGIQVHGGMGFIE
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHCCEEEECCCCCHH
ETGAAQHLRDSRIAPIYEGTNGIQAADLVTRKLGYDNGGVLQALMAEIAAEMEDVPEVAA
HCCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAKDAAAIGQWMSSTASLDDKLAGSVPFTTMCAVAVAGWQLARQSRASDLHSKIAVTKFF
HHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRVIVPEARGLGSSAMAGAALLYDLDADALAG
HHHCCCCCCCCCCHHHHCEEEEEECCHHHHCC
>Mature Secondary Structure 
SFTPPTADQILAIRVSAGIDELAQSERFAAATPDLVEAIVEGIGAFAAGEWAPLHRAGD
CCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCH
QVGAKCGNGRVTLPAGYVEAYRSFVEQGWGSINGPVDFGGQGLPFTLATAVLETLGAANM
HHCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
GFTLLPILTVGAIEALDHHGSEAQKALYLPKLISGEWSGTMNLTEPQAGSDVGALRSTAT
CHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCC
PITEGPHAGKYRIAGTKIFITFGEHDAAENIIHLVLARTPGAPDGSRGISLFIVPKFHVE
CCCCCCCCCEEEEECEEEEEEECCCHHHHHHHHHHEECCCCCCCCCCCEEEEEEEEEEEC
QDGSLGARNDVRCVSIEHKLGIHASPTCVMSYGDNGECIGEMVGHENGGLRAMFTMMNSA
CCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEHEEHHHCC
RINVGSQGVQIAERAFQQARTYARDRVQSTRAGAPGKNPVAIIEHPDVRRMLMRMRALTE
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCC
GSRALLYYTAGQVDRGALGNEAAQKRAELLVPMLKAWGTDIGCEVASLGIQVHGGMGFIE
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHCCEEEECCCCCHH
ETGAAQHLRDSRIAPIYEGTNGIQAADLVTRKLGYDNGGVLQALMAEIAAEMEDVPEVAA
HCCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAKDAAAIGQWMSSTASLDDKLAGSVPFTTMCAVAVAGWQLARQSRASDLHSKIAVTKFF
HHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRVIVPEARGLGSSAMAGAALLYDLDADALAG
HHHCCCCCCCCCCHHHHCEEEEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]