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The map label for this gene is 86751620

Identifier: 86751620

GI number: 86751620

Start: 5109767

End: 5111212

Strand: Direct

Name: 86751620

Synonym: RPB_4522

Alternate gene names: NA

Gene position: 5109767-5111212 (Clockwise)

Preceding gene: 86751619

Following gene: 86751622

Centisome position: 95.84

GC content: 49.17

Gene sequence:

>1446_bases
ATGCTATTTTCGACTCATGGAGATCAAAACGTTCATGTTCCTGGAGACAGGTTCGAGGCTTTAGGCTTGGCGGACCTAAG
GCGAATTCGCTTCTCAGGCAGGGCTCAATCAGAACAGACCTTCGCAGGCAACTTCGTTGAGTGCCTTTTCGACGGCGTCG
AGCTTGACAAGATCAACTTCTCGAATTGCGACTGGAAGGATTGTCGAGTTTACAATACCACTTTTATCGACTGCGAACTG
GGCGACGCGTCATTCATTACAAACCTGTTCGATCAGTGCAGCTTTATCCAATGCAAGTTTCCAAATACTGGGATCAGCGA
TTGCAGCTTCCGCAATTGTGTTTTCGAGGACTGTGATCTCAGCAACATCGTAATGAAGTCAAATCGAATCGAGCGATCTC
GATTCAGTCGATGCTCAACTTCAAACAGGGTCATTGAGAGTAGCTTACTCATTGACACCTCTTGGAGTGGTATGAATTTG
GAAGTTGGTCTGATCCTTGGAAACTTCGGTCTCGAGCGGTCTAATGTTCAGGCCTGCGTACTGTTCGAAAAACAGCCTGA
CCGCAGCTTGCGGGAAATCACTTGGTCTGACCTCGGTCGTATAGGAGGTCACCGGCCACTGAGCCCCATCGAAACATTCC
GTTTGGCATTCTTTGAGACCGGGGACGCAGACGGAGATCCCGACGCACTTGAACAGGCAATCAATCCACGAAATTGGACC
AGCGAGGCGATTATAGAGTCGAGCTTCGGAGCTCTACTGAATTCGTTTGCTCAATTTTTGCTGGCGCTATTCGCCGCGAA
CCGTTTACCCGTCTATGGTCTACTCCGCTTTCACACTCATAATTTTGCACTACTGGAATGGCTGTCAGGGAAGCCCGAGT
TTTCATCCCTTTATCAATCTGCCGCGGGCGTCCATCTTTCTGTGACTCGGGAAGTTGACGCTTACGCTAGAGCAGTTCAG
GAAATAGTCGACGCTCATACAAACTTGCTCCATATTCGACTTGAAGCAGATGGCCCCCTGGATCCTAGCTATTACGAATC
GCTCTTTCGTGAAGCCGATGGCGGGCAGATTCGGGTAGATTGGGTTCGCCCGCGCAATTCTCCGGTAGAAGTCTCCTTAA
ATTTCTTCGACTATGCAACTTTGCTGTCGATAGTCGCTCTCGTACTCGCAACCCGAACGAAATTTGAACTGTCAAAAATA
CAGTCAATGGGATGGATAGCGTCTCCACCGACAGGCGATCGAAATGGAGAAGCCGCCAACGGCAAGCAATTGATCGCATT
TCGAACAGGCTTCTCTCTCGATCGTCCCTCTGAGTATGAAATTAATGTGCGAACATTACTGCCGCGCTCCTTCCTTTTAG
ATCTACACCTTTGCTTGAACATCTCTCTGTTCAAGAGGGTCAGAGGGGTGTTGATTGGATTGCTACTGCCACCTAAAGAC
CCTTGA

Upstream 100 bases:

>100_bases
TCCCACGCCGCTGGAAAATTCCCACAACCTCTGGTTATACTGGGCCACGAGATTTTTGAACCACTCCATTTCATAACTCG
GAATTATGATCGTGCGCGGA

Downstream 100 bases:

>100_bases
TCACCCGAAGGTCTTCGCCGGCCTCCAGGAGGATTGCTCCCGTTTTCTCGATGTTCTCTGTCGGCGTAAAGTAATTGATC
CGTACCGCTTCAAATTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MLFSTHGDQNVHVPGDRFEALGLADLRRIRFSGRAQSEQTFAGNFVECLFDGVELDKINFSNCDWKDCRVYNTTFIDCEL
GDASFITNLFDQCSFIQCKFPNTGISDCSFRNCVFEDCDLSNIVMKSNRIERSRFSRCSTSNRVIESSLLIDTSWSGMNL
EVGLILGNFGLERSNVQACVLFEKQPDRSLREITWSDLGRIGGHRPLSPIETFRLAFFETGDADGDPDALEQAINPRNWT
SEAIIESSFGALLNSFAQFLLALFAANRLPVYGLLRFHTHNFALLEWLSGKPEFSSLYQSAAGVHLSVTREVDAYARAVQ
EIVDAHTNLLHIRLEADGPLDPSYYESLFREADGGQIRVDWVRPRNSPVEVSLNFFDYATLLSIVALVLATRTKFELSKI
QSMGWIASPPTGDRNGEAANGKQLIAFRTGFSLDRPSEYEINVRTLLPRSFLLDLHLCLNISLFKRVRGVLIGLLLPPKD
P

Sequences:

>Translated_481_residues
MLFSTHGDQNVHVPGDRFEALGLADLRRIRFSGRAQSEQTFAGNFVECLFDGVELDKINFSNCDWKDCRVYNTTFIDCEL
GDASFITNLFDQCSFIQCKFPNTGISDCSFRNCVFEDCDLSNIVMKSNRIERSRFSRCSTSNRVIESSLLIDTSWSGMNL
EVGLILGNFGLERSNVQACVLFEKQPDRSLREITWSDLGRIGGHRPLSPIETFRLAFFETGDADGDPDALEQAINPRNWT
SEAIIESSFGALLNSFAQFLLALFAANRLPVYGLLRFHTHNFALLEWLSGKPEFSSLYQSAAGVHLSVTREVDAYARAVQ
EIVDAHTNLLHIRLEADGPLDPSYYESLFREADGGQIRVDWVRPRNSPVEVSLNFFDYATLLSIVALVLATRTKFELSKI
QSMGWIASPPTGDRNGEAANGKQLIAFRTGFSLDRPSEYEINVRTLLPRSFLLDLHLCLNISLFKRVRGVLIGLLLPPKD
P
>Mature_481_residues
MLFSTHGDQNVHVPGDRFEALGLADLRRIRFSGRAQSEQTFAGNFVECLFDGVELDKINFSNCDWKDCRVYNTTFIDCEL
GDASFITNLFDQCSFIQCKFPNTGISDCSFRNCVFEDCDLSNIVMKSNRIERSRFSRCSTSNRVIESSLLIDTSWSGMNL
EVGLILGNFGLERSNVQACVLFEKQPDRSLREITWSDLGRIGGHRPLSPIETFRLAFFETGDADGDPDALEQAINPRNWT
SEAIIESSFGALLNSFAQFLLALFAANRLPVYGLLRFHTHNFALLEWLSGKPEFSSLYQSAAGVHLSVTREVDAYARAVQ
EIVDAHTNLLHIRLEADGPLDPSYYESLFREADGGQIRVDWVRPRNSPVEVSLNFFDYATLLSIVALVLATRTKFELSKI
QSMGWIASPPTGDRNGEAANGKQLIAFRTGFSLDRPSEYEINVRTLLPRSFLLDLHLCLNISLFKRVRGVLIGLLLPPKD
P

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54043; Mature: 54043

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSTHGDQNVHVPGDRFEALGLADLRRIRFSGRAQSEQTFAGNFVECLFDGVELDKINF
CCCCCCCCCEEECCCCHHHHCCHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCCEEEEECC
SNCDWKDCRVYNTTFIDCELGDASFITNLFDQCSFIQCKFPNTGISDCSFRNCVFEDCDL
CCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
SNIVMKSNRIERSRFSRCSTSNRVIESSLLIDTSWSGMNLEVGLILGNFGLERSNVQACV
CHHHHHCCCHHHHHHHHCCCCCCEEEHEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEE
LFEKQPDRSLREITWSDLGRIGGHRPLSPIETFRLAFFETGDADGDPDALEQAINPRNWT
EEECCCCCHHHHCCHHHHHHCCCCCCCCHHHHHEEEEEECCCCCCCHHHHHHHCCCCCCC
SEAIIESSFGALLNSFAQFLLALFAANRLPVYGLLRFHTHNFALLEWLSGKPEFSSLYQS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEHHHHCCCCHHHHHHHH
AAGVHLSVTREVDAYARAVQEIVDAHTNLLHIRLEADGPLDPSYYESLFREADGGQIRVD
HCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEE
WVRPRNSPVEVSLNFFDYATLLSIVALVLATRTKFELSKIQSMGWIASPPTGDRNGEAAN
EECCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
GKQLIAFRTGFSLDRPSEYEINVRTLLPRSFLLDLHLCLNISLFKRVRGVLIGLLLPPKD
CCEEEEEECCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
P
C
>Mature Secondary Structure
MLFSTHGDQNVHVPGDRFEALGLADLRRIRFSGRAQSEQTFAGNFVECLFDGVELDKINF
CCCCCCCCCEEECCCCHHHHCCHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCCEEEEECC
SNCDWKDCRVYNTTFIDCELGDASFITNLFDQCSFIQCKFPNTGISDCSFRNCVFEDCDL
CCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
SNIVMKSNRIERSRFSRCSTSNRVIESSLLIDTSWSGMNLEVGLILGNFGLERSNVQACV
CHHHHHCCCHHHHHHHHCCCCCCEEEHEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEE
LFEKQPDRSLREITWSDLGRIGGHRPLSPIETFRLAFFETGDADGDPDALEQAINPRNWT
EEECCCCCHHHHCCHHHHHHCCCCCCCCHHHHHEEEEEECCCCCCCHHHHHHHCCCCCCC
SEAIIESSFGALLNSFAQFLLALFAANRLPVYGLLRFHTHNFALLEWLSGKPEFSSLYQS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEHHHHCCCCHHHHHHHH
AAGVHLSVTREVDAYARAVQEIVDAHTNLLHIRLEADGPLDPSYYESLFREADGGQIRVD
HCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEE
WVRPRNSPVEVSLNFFDYATLLSIVALVLATRTKFELSKIQSMGWIASPPTGDRNGEAAN
EECCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
GKQLIAFRTGFSLDRPSEYEINVRTLLPRSFLLDLHLCLNISLFKRVRGVLIGLLLPPKD
CCEEEEEECCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA