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The map label for this gene is yclN [H]

Identifier: 86751498

GI number: 86751498

Start: 4982181

End: 4983158

Strand: Direct

Name: yclN [H]

Synonym: RPB_4397

Alternate gene names: 86751498

Gene position: 4982181-4983158 (Clockwise)

Preceding gene: 86751497

Following gene: 86751499

Centisome position: 93.45

GC content: 68.92

Gene sequence:

>978_bases
ATGATGCCCGTCGAACGGCCGGTCGGGCGCCCTGTCGGCGCGGCCGCGCTTCTGGTGCTGGCAGGGCTGTTCATCACCAG
CCTGTTCGTCGGCGTCGGCGAGGTCTCGCTCCGCGACGCCTTCACCGATCCCGATGCGCTTTATCTCATCGCCGCGAGTC
GCCTGCCGCGAACGCTCGCCGCCGTGCTGACGGGGGCCGGCCTCGCGATCGCAGGCCTGGTGATGCAGACGCTGGCGCGC
AACCGCTTCGTCGAACCGACGACGGCGGGCACCGGCCAGAGCGCCGCGCTCGGCATTCTGCTCGTCACGCTCTTGATGCC
GTCGGCGTCGATCGCGACGAAGACCCTCGTCGCCAGCGTGACCGCGCTCGCCGGCACATCGCTGTTCCTGTCGATCGCAC
ACCGGCTGCCGCCGACGCAGCCGTTTCTGGTGCCGCTGTTCGGGCTGGTCTATGGCGGCGTCGTCGGCGCGGCCGTCACC
TTCGTCGCCTGGCATGCCGATCTGCTGCAATTCGTCGAGATCTGGACCAGTGGCGAGTTCTCCGGCGTGCTACGCGGGCG
CTACGAACTACTCTGGGTCTCGGCGGCGATGCTGGCGGCGACATGGATCTTCGCCGACCGCTTCACCCTGATGTCGCTGG
GGCGCGACGTCAGCGTCGGGTTGGGCCTCGACTATGCGCGGATGATGCAGATCGGCCTCGTCATCATTTCGGTCGTCACC
GCGCTGACGGTCGTGATCGTCGGGCTGATCCCGTTCGTCGGCCTCGTCGTCCCCAACATGGTCTCGCGGCTGATGGGCGA
CAACATGCGGTCGGCGATCCCCTGGGTGGCGGGCAGCGGCGCGGCGCTGGTTCTGGTCTGCGACATCATCGGCCGGCTGC
TGCGCTTTCCCTACGAGATCCCGGTCGGCACCGTGCTCGGCGTGGTCGGCGCCGCGGCTTTCCTCTGGCTGCTGTTTCGC
AGGCCGGCCCATGCGTGA

Upstream 100 bases:

>100_bases
TGATCTATCTTCCCGCGGCCGATCTGTACATTGCGGGAGGCGGCATCCAGGCCATGACCCGCGTGCTCGCGGCGATCACC
CGCGGATTCTCGGCCACGCC

Downstream 100 bases:

>100_bases
TCGCTCCACGATCGTGCTGGCGGCGCTCGGCCTGACCGCACTCGCCTGCATCGGCGCCTTCATGACGATCGGACTGCGCG
GCAATCTGGCGTTCGCGCTC

Product: transport system permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MMPVERPVGRPVGAAALLVLAGLFITSLFVGVGEVSLRDAFTDPDALYLIAASRLPRTLAAVLTGAGLAIAGLVMQTLAR
NRFVEPTTAGTGQSAALGILLVTLLMPSASIATKTLVASVTALAGTSLFLSIAHRLPPTQPFLVPLFGLVYGGVVGAAVT
FVAWHADLLQFVEIWTSGEFSGVLRGRYELLWVSAAMLAATWIFADRFTLMSLGRDVSVGLGLDYARMMQIGLVIISVVT
ALTVVIVGLIPFVGLVVPNMVSRLMGDNMRSAIPWVAGSGAALVLVCDIIGRLLRFPYEIPVGTVLGVVGAAAFLWLLFR
RPAHA

Sequences:

>Translated_325_residues
MMPVERPVGRPVGAAALLVLAGLFITSLFVGVGEVSLRDAFTDPDALYLIAASRLPRTLAAVLTGAGLAIAGLVMQTLAR
NRFVEPTTAGTGQSAALGILLVTLLMPSASIATKTLVASVTALAGTSLFLSIAHRLPPTQPFLVPLFGLVYGGVVGAAVT
FVAWHADLLQFVEIWTSGEFSGVLRGRYELLWVSAAMLAATWIFADRFTLMSLGRDVSVGLGLDYARMMQIGLVIISVVT
ALTVVIVGLIPFVGLVVPNMVSRLMGDNMRSAIPWVAGSGAALVLVCDIIGRLLRFPYEIPVGTVLGVVGAAAFLWLLFR
RPAHA
>Mature_325_residues
MMPVERPVGRPVGAAALLVLAGLFITSLFVGVGEVSLRDAFTDPDALYLIAASRLPRTLAAVLTGAGLAIAGLVMQTLAR
NRFVEPTTAGTGQSAALGILLVTLLMPSASIATKTLVASVTALAGTSLFLSIAHRLPPTQPFLVPLFGLVYGGVVGAAVT
FVAWHADLLQFVEIWTSGEFSGVLRGRYELLWVSAAMLAATWIFADRFTLMSLGRDVSVGLGLDYARMMQIGLVIISVVT
ALTVVIVGLIPFVGLVVPNMVSRLMGDNMRSAIPWVAGSGAALVLVCDIIGRLLRFPYEIPVGTVLGVVGAAAFLWLLFR
RPAHA

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=325, Percent_Identity=29.2307692307692, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1790741, Length=338, Percent_Identity=28.4023668639053, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1788004, Length=301, Percent_Identity=31.8936877076412, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786805, Length=275, Percent_Identity=31.2727272727273, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1786347, Length=264, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34152; Mature: 34152

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPVERPVGRPVGAAALLVLAGLFITSLFVGVGEVSLRDAFTDPDALYLIAASRLPRTLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEHHHHHHHHHHH
AVLTGAGLAIAGLVMQTLARNRFVEPTTAGTGQSAALGILLVTLLMPSASIATKTLVASV
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
TALAGTSLFLSIAHRLPPTQPFLVPLFGLVYGGVVGAAVTFVAWHADLLQFVEIWTSGEF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
SGVLRGRYELLWVSAAMLAATWIFADRFTLMSLGRDVSVGLGLDYARMMQIGLVIISVVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHH
ALTVVIVGLIPFVGLVVPNMVSRLMGDNMRSAIPWVAGSGAALVLVCDIIGRLLRFPYEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PVGTVLGVVGAAAFLWLLFRRPAHA
CHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMPVERPVGRPVGAAALLVLAGLFITSLFVGVGEVSLRDAFTDPDALYLIAASRLPRTLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEHHHHHHHHHHH
AVLTGAGLAIAGLVMQTLARNRFVEPTTAGTGQSAALGILLVTLLMPSASIATKTLVASV
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
TALAGTSLFLSIAHRLPPTQPFLVPLFGLVYGGVVGAAVTFVAWHADLLQFVEIWTSGEF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
SGVLRGRYELLWVSAAMLAATWIFADRFTLMSLGRDVSVGLGLDYARMMQIGLVIISVVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHH
ALTVVIVGLIPFVGLVVPNMVSRLMGDNMRSAIPWVAGSGAALVLVCDIIGRLLRFPYEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PVGTVLGVVGAAAFLWLLFRRPAHA
CHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]