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The map label for this gene is yclQ [H]

Identifier: 86751497

GI number: 86751497

Start: 4981207

End: 4982184

Strand: Direct

Name: yclQ [H]

Synonym: RPB_4396

Alternate gene names: 86751497

Gene position: 4981207-4982184 (Clockwise)

Preceding gene: 86751496

Following gene: 86751498

Centisome position: 93.43

GC content: 67.69

Gene sequence:

>978_bases
ATGCAGTCTCCGTCACCCTGTGATCATCGCCCCGCGCCGGGCTTGCGGCCACGTTCTGTTCAAAGGCAAACCATGTTCAT
GATCCGGTTGATCGCCATTCTGGCCGCTTGCGTGCTTCCGGCAGCAGCCTTCGCCGAGGCCGTCGACATCAGCACGGCGC
GCGGGGTGGTGGCGCTGCAGGCCAAGCCCCGACGCGTCGCGGTGTTCGACATGGCGGCGCTCGACACGCTCGATCTGCTC
GGCGTCAAGGCCGCCGGCGTGCCGGATCGGGTGTATCTGCCCGAGCTGAAAAAGGCTGCCGCCGGCGCGGAAGTCGTCGG
CACTCTGTTCGAACCGGACCTCGAAGCGCTCAGCGCACTCGGCCCGGATCTGATCATTCTCGGCGGACGCTCCTCACCGA
AACTGCAACAGACCGCGCGCGTCGCACCGACCATCGACATGTCGATCGACGGACAGGACCTCATCAAGGACGCCGAAGTG
CGCCTCGAGGGCTATGGCCGGCTGTTCGGCCGCGAGCAGGCGGCGCGCGAGGCGCAGCAGACTTTCATCGCCGCCGTCGC
CGCGGCGCGCGAGGCGGCGAAGGGCAAGGGTCGGGCGCTGATCCTGATGACCAACGGACCCAAGATCTCGGCCTTCGGCG
TCGGGTCGCGGTTCGGCTGGCTGCATTCGACGCTCGGCATCGAACCCGCCGTGAACCCGATGAGCCCCGGAATCCACGGG
GAAGCGGTGTCGTTCGAATTCGTCCGCAAGGCGGATCCCGACTGGCTGATCGTGGTCGATCGCGCGCTCGCGATCGGCGC
CGGCGACAGCCAGGCGCGTGCGACGCTCGACAACGAGCTGGTCCGTAGCACCAAGGCGTGGAAGCAGGGCCGCGTGATCT
ATCTTCCCGCGGCCGATCTGTACATTGCGGGAGGCGGCATCCAGGCCATGACCCGCGTGCTCGCGGCGATCACCCGCGGA
TTCTCGGCCACGCCATGA

Upstream 100 bases:

>100_bases
GCGCGGCTGCGCGCGGTGTTTCTCGCCTGGTGCGTCGACCAGGGCTGGGCGCCCGGCTCCTCATCCGAAAACCGATTGGT
AGCAGGATGAAGCTCCCGCT

Downstream 100 bases:

>100_bases
TGCCCGTCGAACGGCCGGTCGGGCGCCCTGTCGGCGCGGCCGCGCTTCTGGTGCTGGCAGGGCTGTTCATCACCAGCCTG
TTCGTCGGCGTCGGCGAGGT

Product: periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MQSPSPCDHRPAPGLRPRSVQRQTMFMIRLIAILAACVLPAAAFAEAVDISTARGVVALQAKPRRVAVFDMAALDTLDLL
GVKAAGVPDRVYLPELKKAAAGAEVVGTLFEPDLEALSALGPDLIILGGRSSPKLQQTARVAPTIDMSIDGQDLIKDAEV
RLEGYGRLFGREQAAREAQQTFIAAVAAAREAAKGKGRALILMTNGPKISAFGVGSRFGWLHSTLGIEPAVNPMSPGIHG
EAVSFEFVRKADPDWLIVVDRALAIGAGDSQARATLDNELVRSTKAWKQGRVIYLPAADLYIAGGGIQAMTRVLAAITRG
FSATP

Sequences:

>Translated_325_residues
MQSPSPCDHRPAPGLRPRSVQRQTMFMIRLIAILAACVLPAAAFAEAVDISTARGVVALQAKPRRVAVFDMAALDTLDLL
GVKAAGVPDRVYLPELKKAAAGAEVVGTLFEPDLEALSALGPDLIILGGRSSPKLQQTARVAPTIDMSIDGQDLIKDAEV
RLEGYGRLFGREQAAREAQQTFIAAVAAAREAAKGKGRALILMTNGPKISAFGVGSRFGWLHSTLGIEPAVNPMSPGIHG
EAVSFEFVRKADPDWLIVVDRALAIGAGDSQARATLDNELVRSTKAWKQGRVIYLPAADLYIAGGGIQAMTRVLAAITRG
FSATP
>Mature_325_residues
MQSPSPCDHRPAPGLRPRSVQRQTMFMIRLIAILAACVLPAAAFAEAVDISTARGVVALQAKPRRVAVFDMAALDTLDLL
GVKAAGVPDRVYLPELKKAAAGAEVVGTLFEPDLEALSALGPDLIILGGRSSPKLQQTARVAPTIDMSIDGQDLIKDAEV
RLEGYGRLFGREQAAREAQQTFIAAVAAAREAAKGKGRALILMTNGPKISAFGVGSRFGWLHSTLGIEPAVNPMSPGIHG
EAVSFEFVRKADPDWLIVVDRALAIGAGDSQARATLDNELVRSTKAWKQGRVIYLPAADLYIAGGGIQAMTRVLAAITRG
FSATP

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4607

COG function: function code P; ABC-type enterochelin transport system, periplasmic component

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 34353; Mature: 34353

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPSPCDHRPAPGLRPRSVQRQTMFMIRLIAILAACVLPAAAFAEAVDISTARGVVALQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
AKPRRVAVFDMAALDTLDLLGVKAAGVPDRVYLPELKKAAAGAEVVGTLFEPDLEALSAL
CCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHC
GPDLIILGGRSSPKLQQTARVAPTIDMSIDGQDLIKDAEVRLEGYGRLFGREQAAREAQQ
CCCEEEECCCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFIAAVAAAREAAKGKGRALILMTNGPKISAFGVGSRFGWLHSTLGIEPAVNPMSPGIHG
HHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCC
EAVSFEFVRKADPDWLIVVDRALAIGAGDSQARATLDNELVRSTKAWKQGRVIYLPAADL
CCEEEHHHHCCCCCEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCE
YIAGGGIQAMTRVLAAITRGFSATP
EEECCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQSPSPCDHRPAPGLRPRSVQRQTMFMIRLIAILAACVLPAAAFAEAVDISTARGVVALQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
AKPRRVAVFDMAALDTLDLLGVKAAGVPDRVYLPELKKAAAGAEVVGTLFEPDLEALSAL
CCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHC
GPDLIILGGRSSPKLQQTARVAPTIDMSIDGQDLIKDAEVRLEGYGRLFGREQAAREAQQ
CCCEEEECCCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFIAAVAAAREAAKGKGRALILMTNGPKISAFGVGSRFGWLHSTLGIEPAVNPMSPGIHG
HHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCC
EAVSFEFVRKADPDWLIVVDRALAIGAGDSQARATLDNELVRSTKAWKQGRVIYLPAADL
CCEEEHHHHCCCCCEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCE
YIAGGGIQAMTRVLAAITRGFSATP
EEECCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10658653 [H]