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The map label for this gene is yclO [H]

Identifier: 86751499

GI number: 86751499

Start: 4983151

End: 4984101

Strand: Direct

Name: yclO [H]

Synonym: RPB_4398

Alternate gene names: 86751499

Gene position: 4983151-4984101 (Clockwise)

Preceding gene: 86751498

Following gene: 86751500

Centisome position: 93.46

GC content: 67.3

Gene sequence:

>951_bases
ATGCGTGATCGCTCCACGATCGTGCTGGCGGCGCTCGGCCTGACCGCACTCGCCTGCATCGGCGCCTTCATGACGATCGG
ACTGCGCGGCAATCTGGCGTTCGCGCTCGAACTGCGCAGCACACGCCTGCTGGCCCTGATACTCGTCGCGATTTCCATTG
CCGTCTCGACGGTGGTGTTCCAGACCGTGACGGCGAACCGGATACTGACGCCGTCGATCATGGGGCTCGACGCGCTCTAC
GTCTTCAGCCAGTCGCTGCTGGTCTTCGCCGTCGGCGGGCTCGGCTTCGCGTCACTCGACCCGCGGCTCAAATTCGCCGG
TGAGGCGCTGGTGATGGTCGCGCTCGCGGCGCTGCTGTTCCTGCCGCTGCTCAGATCGCGCGTCGACCTGATCCTGATGC
TGCTGGCGGGCGTCACCATCGGCGTGCTGTTCCGAAGCCTGTCGTCGCTGCTCGCGCGCCTGATCGACCCCAACGACTTC
GCCCTCCTGCAAGGCGCGAGCTATGCCGGCTTCGGCAAGATACACGGCGAGCTCCTGGTCGCGGCCGGGGTGTTGTCCGC
GATCGGAATCGCGATCGCATGGCGGATGCGCCACGTGCTGGATGTTCTCGCACTCGGGCGCGACACCGCGACGGGCCTCG
GCCTCGAATGGACCCGCGTCGTCGCCGGGATGATCATGCTGGTCGCCGCATTGGTCGCCGTCTCCACCGCGCTGGTCGGG
CCGGTCGCGTTCTTCGGCCTGCTCGTGGTCGCATTGGGCGAGCGGCTGATCGACACCCGCCGCCATGCGATCCTGCTGCC
CACCGCGGCGCTGGTGGCGATCATCGTGCTTGTCGGCGGACAGACCATCTTGCAGCATGGATTGGGCGGCGTCTCCACGC
TGGGCGTCGTCATCGAGTTCGTGGGGGGCCTCGTCTTCCTCGCAATGCTTCTCCACGGAGTGCGGCGATGA

Upstream 100 bases:

>100_bases
GGCCGGCTGCTGCGCTTTCCCTACGAGATCCCGGTCGGCACCGTGCTCGGCGTGGTCGGCGCCGCGGCTTTCCTCTGGCT
GCTGTTTCGCAGGCCGGCCC

Downstream 100 bases:

>100_bases
TCGTCGTGAAGAACATCTCGCTCGCCTACCAGGGCGCGAGGATCCTGCGGGACATCAATCTGGAGATTCCCGAAACCGGC
GTCACCGCACTGATCGGCCC

Product: transport system permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRDRSTIVLAALGLTALACIGAFMTIGLRGNLAFALELRSTRLLALILVAISIAVSTVVFQTVTANRILTPSIMGLDALY
VFSQSLLVFAVGGLGFASLDPRLKFAGEALVMVALAALLFLPLLRSRVDLILMLLAGVTIGVLFRSLSSLLARLIDPNDF
ALLQGASYAGFGKIHGELLVAAGVLSAIGIAIAWRMRHVLDVLALGRDTATGLGLEWTRVVAGMIMLVAALVAVSTALVG
PVAFFGLLVVALGERLIDTRRHAILLPTAALVAIIVLVGGQTILQHGLGGVSTLGVVIEFVGGLVFLAMLLHGVRR

Sequences:

>Translated_316_residues
MRDRSTIVLAALGLTALACIGAFMTIGLRGNLAFALELRSTRLLALILVAISIAVSTVVFQTVTANRILTPSIMGLDALY
VFSQSLLVFAVGGLGFASLDPRLKFAGEALVMVALAALLFLPLLRSRVDLILMLLAGVTIGVLFRSLSSLLARLIDPNDF
ALLQGASYAGFGKIHGELLVAAGVLSAIGIAIAWRMRHVLDVLALGRDTATGLGLEWTRVVAGMIMLVAALVAVSTALVG
PVAFFGLLVVALGERLIDTRRHAILLPTAALVAIIVLVGGQTILQHGLGGVSTLGVVIEFVGGLVFLAMLLHGVRR
>Mature_316_residues
MRDRSTIVLAALGLTALACIGAFMTIGLRGNLAFALELRSTRLLALILVAISIAVSTVVFQTVTANRILTPSIMGLDALY
VFSQSLLVFAVGGLGFASLDPRLKFAGEALVMVALAALLFLPLLRSRVDLILMLLAGVTIGVLFRSLSSLLARLIDPNDF
ALLQGASYAGFGKIHGELLVAAGVLSAIGIAIAWRMRHVLDVLALGRDTATGLGLEWTRVVAGMIMLVAALVAVSTALVG
PVAFFGLLVVALGERLIDTRRHAILLPTAALVAIIVLVGGQTILQHGLGGVSTLGVVIEFVGGLVFLAMLLHGVRR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4605

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 33003; Mature: 33003

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDRSTIVLAALGLTALACIGAFMTIGLRGNLAFALELRSTRLLALILVAISIAVSTVVF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
QTVTANRILTPSIMGLDALYVFSQSLLVFAVGGLGFASLDPRLKFAGEALVMVALAALLF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LPLLRSRVDLILMLLAGVTIGVLFRSLSSLLARLIDPNDFALLQGASYAGFGKIHGELLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHH
AAGVLSAIGIAIAWRMRHVLDVLALGRDTATGLGLEWTRVVAGMIMLVAALVAVSTALVG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
PVAFFGLLVVALGERLIDTRRHAILLPTAALVAIIVLVGGQTILQHGLGGVSTLGVVIEF
HHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHH
VGGLVFLAMLLHGVRR
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDRSTIVLAALGLTALACIGAFMTIGLRGNLAFALELRSTRLLALILVAISIAVSTVVF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
QTVTANRILTPSIMGLDALYVFSQSLLVFAVGGLGFASLDPRLKFAGEALVMVALAALLF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LPLLRSRVDLILMLLAGVTIGVLFRSLSSLLARLIDPNDFALLQGASYAGFGKIHGELLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHH
AAGVLSAIGIAIAWRMRHVLDVLALGRDTATGLGLEWTRVVAGMIMLVAALVAVSTALVG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
PVAFFGLLVVALGERLIDTRRHAILLPTAALVAIIVLVGGQTILQHGLGGVSTLGVVIEF
HHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHH
VGGLVFLAMLLHGVRR
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]