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The map label for this gene is 86751469

Identifier: 86751469

GI number: 86751469

Start: 4951284

End: 4952015

Strand: Reverse

Name: 86751469

Synonym: RPB_4367

Alternate gene names: NA

Gene position: 4952015-4951284 (Counterclockwise)

Preceding gene: 86751470

Following gene: 86751468

Centisome position: 92.88

GC content: 66.67

Gene sequence:

>732_bases
ATGTCGAGATCGCTTAGTCTCATCGCCGGTCTCGCCGCCGCCGCGCTGGTCGCCGTGCCGCTGACCGGGGCAATCGCCGA
GAAGGCCGCGCCGAAGCCGTCGAAGGCCGCGGCGACCAAGACGGTTGCGCCGCCGCCCGCGCCGGTGAAACTCGGCCTCG
GCCGGCAGGCGCTGCCGGAAGAAATTCACGCCTGGGACACTGATGTGCGTCCCGACGGCGTCGGCCTGCCGCCCGGCAAG
GGCACCGCGAAAGAAGGCGACGCGCTGTTCCAGGAGAAGTGCTCGACCTGCCACGGCGAATTCGGCGAAGGCGTCGGCCG
CTATCCGGTGCTGTCCGGCGGGGTCGGCACGCTGACCGCCGATCGCCCGGACAAGACCGTCGGCTCGTATTGGCCGGACG
CCACCACGGTGTACGACTACATCAGCCGCGCCATGCCGTTCGGCAATGCGCGCTCGCTCACCGCCGACGAGGCCTATGCG
CTGACGGCCTATCTGCTCAACATGAGTGACGTGATCAAGGATCCGGATTTCGAACTGAACCAGGGCAACCTCGCGAAGGT
GAAGATGCCCAACGCCGACGGCTTCTACCTCGACGATCGCGAGGTTTCCGAGAAGCAATTCTGGAACAAGAATCCGTGCA
TGACGAATTGCGGTCCCGCGCCGAAAGTGATCGGACGCGCGATCTCGGTCGACGTCACGCCGGACGAGAAGGCCGGGCCC
AGGGTGGACTGA

Upstream 100 bases:

>100_bases
CCGAGCAAGGCCGAGCTGCGCAAGGTCCGCGGCGTCAATTCGATCTACCACAACAACGGCATCCAGACCTGGCTCGTGCA
TCCGGACGGAGTGACTGAAA

Downstream 100 bases:

>100_bases
CGATGAGTGCGATACACGGCCGCGCGCCGTGGGCGCGAAGTAACAATTGCGGGAATTCGGCGGTGCGGCGAAGTCGCGTT
GCGCCAGATCAATGCCCGAT

Product: cytochrome c, class I

Products: NA

Alternate protein names: Sulfite Oxidase Cytochrome Subunit; Diheme Cytochrome C SoxD; Cytochrome; Cytochrome C; Cytochrome C Subfamily; Cytochrome C-Type; Sulfite Oxidase Cytochrome Subunit SoxD; C-Type Cytochrome; Mo-Co Oxidoreductase Dimerization Domain Protein; Sulfite Oxidase Cytochrome C Subunit SoxD; Sulfur Oxidation Protein SoxCD Diheme Cytochrome C Subunit; Sulfite Dehydrogenase Cytochrome Subunit SoxD; Sulfur Oxidation Protein Cytochrome C Subunit; Cytochrome C Region Protein

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSRSLSLIAGLAAAALVAVPLTGAIAEKAAPKPSKAAATKTVAPPPAPVKLGLGRQALPEEIHAWDTDVRPDGVGLPPGK
GTAKEGDALFQEKCSTCHGEFGEGVGRYPVLSGGVGTLTADRPDKTVGSYWPDATTVYDYISRAMPFGNARSLTADEAYA
LTAYLLNMSDVIKDPDFELNQGNLAKVKMPNADGFYLDDREVSEKQFWNKNPCMTNCGPAPKVIGRAISVDVTPDEKAGP
RVD

Sequences:

>Translated_243_residues
MSRSLSLIAGLAAAALVAVPLTGAIAEKAAPKPSKAAATKTVAPPPAPVKLGLGRQALPEEIHAWDTDVRPDGVGLPPGK
GTAKEGDALFQEKCSTCHGEFGEGVGRYPVLSGGVGTLTADRPDKTVGSYWPDATTVYDYISRAMPFGNARSLTADEAYA
LTAYLLNMSDVIKDPDFELNQGNLAKVKMPNADGFYLDDREVSEKQFWNKNPCMTNCGPAPKVIGRAISVDVTPDEKAGP
RVD
>Mature_242_residues
SRSLSLIAGLAAAALVAVPLTGAIAEKAAPKPSKAAATKTVAPPPAPVKLGLGRQALPEEIHAWDTDVRPDGVGLPPGKG
TAKEGDALFQEKCSTCHGEFGEGVGRYPVLSGGVGTLTADRPDKTVGSYWPDATTVYDYISRAMPFGNARSLTADEAYAL
TAYLLNMSDVIKDPDFELNQGNLAKVKMPNADGFYLDDREVSEKQFWNKNPCMTNCGPAPKVIGRAISVDVTPDEKAGPR
VD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25615; Mature: 25484

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSLSLIAGLAAAALVAVPLTGAIAEKAAPKPSKAAATKTVAPPPAPVKLGLGRQALPE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEECCCCHHHHH
EIHAWDTDVRPDGVGLPPGKGTAKEGDALFQEKCSTCHGEFGEGVGRYPVLSGGVGTLTA
HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCEECCCCCEEEC
DRPDKTVGSYWPDATTVYDYISRAMPFGNARSLTADEAYALTAYLLNMSDVIKDPDFELN
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
QGNLAKVKMPNADGFYLDDREVSEKQFWNKNPCMTNCGPAPKVIGRAISVDVTPDEKAGP
CCCEEEEECCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCC
RVD
CCC
>Mature Secondary Structure 
SRSLSLIAGLAAAALVAVPLTGAIAEKAAPKPSKAAATKTVAPPPAPVKLGLGRQALPE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEECCCCHHHHH
EIHAWDTDVRPDGVGLPPGKGTAKEGDALFQEKCSTCHGEFGEGVGRYPVLSGGVGTLTA
HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCEECCCCCEEEC
DRPDKTVGSYWPDATTVYDYISRAMPFGNARSLTADEAYALTAYLLNMSDVIKDPDFELN
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
QGNLAKVKMPNADGFYLDDREVSEKQFWNKNPCMTNCGPAPKVIGRAISVDVTPDEKAGP
CCCEEEEECCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCC
RVD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA