| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751470
Identifier: 86751470
GI number: 86751470
Start: 4951999
End: 4953276
Strand: Reverse
Name: 86751470
Synonym: RPB_4368
Alternate gene names: NA
Gene position: 4953276-4951999 (Counterclockwise)
Preceding gene: 86751471
Following gene: 86751469
Centisome position: 92.9
GC content: 65.73
Gene sequence:
>1278_bases ATGAGTGAGAAGCCCCCCTCCGACATCCTCGATCGCCGCCGGTTTCTCGGCGCTGCCGGCCTCGCCGGCGCCGGCGCGCT GCTGCCGCTCGCCGCCAAGGCCGGCGAGGCGGCGAAGCCCGACCCGATGATCACCGAGCTGCAGGACTGGAATCGCTTTC TCGGCGACGGCGTCGACAAGAAGCCCTATGGCGTGCCGTCGAAATTCGAGAAGGACGTGATCCGCCGCGACGTGTCGTGG CTCACGGCGTCGCCGGAATCCTCGGTCAATTTCACGCCGCTGCACGCGCTCGACGGCATCATCACGCCGTCCGGCCTGTG CTTCGAGCGCCATCACGGCGGCGTCGCCGAGATCGATCCGGCGCAGCACCGGCTGATGATCAACGGCCTGGTCGACACCC CGATGGTGTTCACCATGGACGACATCCGGCGGATGCCGCGGGTCAACAAGGTGTACTTCCTGGAATGCGCGGCGAATTCC GGCATGGAGTGGCGCGGTGCGCAGCTCAACGGCTGCCAGTTCACCCACGGCATGATCCACAATGTGATGTACACCGGCGT GACGCTGAAGACGCTGCTGGATCAGGCCGGGCTGAAGCCGAACGCCAAATGGCTGATGCTGGAGGGCGCGGACTCCGCCG GCATGAACCGCTCGCTGCCGGTGTCGAAAGCGCTCGACGACGTGCTGATCGCGTTCGCGATGAACGGCGAGGCGCTGCGT CCGGAAAACGGCTATCCGCTGCGCGCGGTGATTCCCGGCTGGCAGGGCAATCTCTGGGTCAAATGGCTGCGCCGCATCGA GGCCGGCGACATGCCGTGGCAGGCCCGCGAGGAGACCTCGAAATACACCGACCTGATGCCGGACGGCCGCGCCCGCAAAT ACACCTTCGTGATGGACGCGAAAAGCGTGATCACCAATCCGTCGCCGCAGGCGCCGCTGAAATTCAAGGGCCGCAACGTG CTGAGCGGCGTCGCCTGGTCGGGGCGCGGCACCGTCAAGCGCGTCGACGTCACCATGGACGGCGGCCGCAACTGGCGCGA GGCGCGGATCGACGGGCCGGTGCTCGACAAGTCGATGGTGCGTTTCTACGTCGATTTCGACTGGAACGGCGAAGAGTTGA TGTTGCAGTCGCGCGCCATCGACGAGACCGGCTACGTGCAGCCGAGCAAGGCCGAGCTGCGCAAGGTCCGCGGCGTCAAT TCGATCTACCACAACAACGGCATCCAGACCTGGCTCGTGCATCCGGACGGAGTGACTGAAAATGTCGAGATCGCTTAG
Upstream 100 bases:
>100_bases CAACAGCGCCGTCAAGGTGTCGGGCGCCTGAGATGACGACCGCCTCCGACGCTCCCCGACCGCTGCAGTCGCGCATGGTG ATAGCAAAAGGCAATCCGGC
Downstream 100 bases:
>100_bases TCTCATCGCCGGTCTCGCCGCCGCCGCGCTGGTCGCCGTGCCGCTGACCGGGGCAATCGCCGAGAAGGCCGCGCCGAAGC CGTCGAAGGCCGCGGCGACC
Product: twin-arginine translocation pathway signal
Products: sulfate; H2O2
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Oxidoreductase; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Dehydrogenase SoxC; Nitrate Reductase Related Protein; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Molybdopterin Dependent Oxidoreductase; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Reductase; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MSEKPPSDILDRRRFLGAAGLAGAGALLPLAAKAGEAAKPDPMITELQDWNRFLGDGVDKKPYGVPSKFEKDVIRRDVSW LTASPESSVNFTPLHALDGIITPSGLCFERHHGGVAEIDPAQHRLMINGLVDTPMVFTMDDIRRMPRVNKVYFLECAANS GMEWRGAQLNGCQFTHGMIHNVMYTGVTLKTLLDQAGLKPNAKWLMLEGADSAGMNRSLPVSKALDDVLIAFAMNGEALR PENGYPLRAVIPGWQGNLWVKWLRRIEAGDMPWQAREETSKYTDLMPDGRARKYTFVMDAKSVITNPSPQAPLKFKGRNV LSGVAWSGRGTVKRVDVTMDGGRNWREARIDGPVLDKSMVRFYVDFDWNGEELMLQSRAIDETGYVQPSKAELRKVRGVN SIYHNNGIQTWLVHPDGVTENVEIA
Sequences:
>Translated_425_residues MSEKPPSDILDRRRFLGAAGLAGAGALLPLAAKAGEAAKPDPMITELQDWNRFLGDGVDKKPYGVPSKFEKDVIRRDVSW LTASPESSVNFTPLHALDGIITPSGLCFERHHGGVAEIDPAQHRLMINGLVDTPMVFTMDDIRRMPRVNKVYFLECAANS GMEWRGAQLNGCQFTHGMIHNVMYTGVTLKTLLDQAGLKPNAKWLMLEGADSAGMNRSLPVSKALDDVLIAFAMNGEALR PENGYPLRAVIPGWQGNLWVKWLRRIEAGDMPWQAREETSKYTDLMPDGRARKYTFVMDAKSVITNPSPQAPLKFKGRNV LSGVAWSGRGTVKRVDVTMDGGRNWREARIDGPVLDKSMVRFYVDFDWNGEELMLQSRAIDETGYVQPSKAELRKVRGVN SIYHNNGIQTWLVHPDGVTENVEIA >Mature_424_residues SEKPPSDILDRRRFLGAAGLAGAGALLPLAAKAGEAAKPDPMITELQDWNRFLGDGVDKKPYGVPSKFEKDVIRRDVSWL TASPESSVNFTPLHALDGIITPSGLCFERHHGGVAEIDPAQHRLMINGLVDTPMVFTMDDIRRMPRVNKVYFLECAANSG MEWRGAQLNGCQFTHGMIHNVMYTGVTLKTLLDQAGLKPNAKWLMLEGADSAGMNRSLPVSKALDDVLIAFAMNGEALRP ENGYPLRAVIPGWQGNLWVKWLRRIEAGDMPWQAREETSKYTDLMPDGRARKYTFVMDAKSVITNPSPQAPLKFKGRNVL SGVAWSGRGTVKRVDVTMDGGRNWREARIDGPVLDKSMVRFYVDFDWNGEELMLQSRAIDETGYVQPSKAELRKVRGVNS IYHNNGIQTWLVHPDGVTENVEIA
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=334, Percent_Identity=29.940119760479, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI74099702, Length=334, Percent_Identity=29.940119760479, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI74099694, Length=334, Percent_Identity=29.940119760479, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71992535, Length=413, Percent_Identity=25.4237288135593, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI18859905, Length=336, Percent_Identity=29.1666666666667, Blast_Score=115, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.3.1
Molecular weight: Translated: 47233; Mature: 47101
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKPPSDILDRRRFLGAAGLAGAGALLPLAAKAGEAAKPDPMITELQDWNRFLGDGVDK CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC KPYGVPSKFEKDVIRRDVSWLTASPESSVNFTPLHALDGIITPSGLCFERHHGGVAEIDP CCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCC AQHRLMINGLVDTPMVFTMDDIRRMPRVNKVYFLECAANSGMEWRGAQLNGCQFTHGMIH CCCEEEEECCCCCCEEEEHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEHHHHHH NVMYTGVTLKTLLDQAGLKPNAKWLMLEGADSAGMNRSLPVSKALDDVLIAFAMNGEALR HHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHEEEEEEECCCEEC PENGYPLRAVIPGWQGNLWVKWLRRIEAGDMPWQAREETSKYTDLMPDGRARKYTFVMDA CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEC KSVITNPSPQAPLKFKGRNVLSGVAWSGRGTVKRVDVTMDGGRNWREARIDGPVLDKSMV HHHHCCCCCCCCEEECCCCEEECEEECCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCEE RFYVDFDWNGEELMLQSRAIDETGYVQPSKAELRKVRGVNSIYHNNGIQTWLVHPDGVTE EEEEEECCCCHHEEEEHHCCCCCCCCCCCHHHHHHHHCCHHHEECCCEEEEEECCCCCCC NVEIA CCEEC >Mature Secondary Structure SEKPPSDILDRRRFLGAAGLAGAGALLPLAAKAGEAAKPDPMITELQDWNRFLGDGVDK CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC KPYGVPSKFEKDVIRRDVSWLTASPESSVNFTPLHALDGIITPSGLCFERHHGGVAEIDP CCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCC AQHRLMINGLVDTPMVFTMDDIRRMPRVNKVYFLECAANSGMEWRGAQLNGCQFTHGMIH CCCEEEEECCCCCCEEEEHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEHHHHHH NVMYTGVTLKTLLDQAGLKPNAKWLMLEGADSAGMNRSLPVSKALDDVLIAFAMNGEALR HHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHEEEEEEECCCEEC PENGYPLRAVIPGWQGNLWVKWLRRIEAGDMPWQAREETSKYTDLMPDGRARKYTFVMDA CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEC KSVITNPSPQAPLKFKGRNVLSGVAWSGRGTVKRVDVTMDGGRNWREARIDGPVLDKSMV HHHHCCCCCCCCEEECCCCEEECEEECCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCEE RFYVDFDWNGEELMLQSRAIDETGYVQPSKAELRKVRGVNSIYHNNGIQTWLVHPDGVTE EEEEEECCCCHHEEEEHHCCCCCCCCCCCHHHHHHHHCCHHHEECCCEEEEEECCCCCCC NVEIA CCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sulfite; O2; H2O
Specific reaction: sulfite + O2 + H2O = sulfate + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA