| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yeeE [C]
Identifier: 86751468
GI number: 86751468
Start: 4950018
End: 4951109
Strand: Reverse
Name: yeeE [C]
Synonym: RPB_4366
Alternate gene names: 86751468
Gene position: 4951109-4950018 (Counterclockwise)
Preceding gene: 86751469
Following gene: 86751467
Centisome position: 92.86
GC content: 70.7
Gene sequence:
>1092_bases TTGAACCTCGAGCAGTTCATCGAACGCTTCGGCGAAACCGCCGCGCTGACCGCCGGCGGTCTGGCGGTGGGCATCGCTTT CGGGGCCTGCGCCGAGCGCAGCAAGTTCTGTCTGCGCGCGGCGGTGATCGAATTCTCCGAAGGTTCACTCGGGCCCAAGC TCGCGGTGTGGCTGCTGACGTTCTCGGCCGCGGTGGCCGCGACCCAGGCGGCGATTGCCACCGGCCTGCTCGACGTCTCC GAAGCGCGCCAGCTCGCCGCCACCGGCAGCCTGTCCGGCGCGGCGATCGGCGGGCTGATGTTCGGCGCCGGCATGATCCT GTCGCGCGGCTGCGCCAGCCGGCTGCTGGTCTTGTCGGGAACCGGCAATCTGCGCGCGCTGGTCACCGGACTGATTTTGA CGATCGTGGCGCAGGCCTCGCTGCGCGGCGTGCTGTCGCCGGCGCGGGAATTCCTGTCGCAGCTCTGGACGCTGCCGGGC GGCGCGGCGCGCAATCTGCTCAGCGTCGCGCATGTCGGCTCGGTGGTCGGGGCATCGCTCGGCGTGTTCGGGCTCGCCGT GGCCTTCTGGCTGGCGTGGCGCAACCGGATCGGCATCGTCAACGGGGTCGCGGCGATCGGCGTCGGCCTGGCGGTGACGG CCGGCTGGCTGGTCACCTACACGCTGTCGCTGTATGCGTTCGAGCCGACCACGGTGAAGAGCGTGAGCTTCACCGGGCCG TCGGCCGATACGCTGATGGGGCTGATCAATTCGCCCTCGGTGCCGCTCGGCTTCGATATCGGGCTGGTGCCCGGCGTGTT CGTCGGCTCGCTGGTCGCCGCGCTGATCGGCCGGGAGTGGAAGCTGCAGGGCTTTCACGATGGGCTGAGCATGGGGCGCT ACGCCGCCGGCGCGTTCCTGATGGGCTTCGGCGGCATGCTGGCGGGCGGCTGCGCGGTCGGCGCCGGCGTCACCGGCGGC TCGATCTTCGCGGTCACCGCCTGGCTGGCGCTGGCGGCGATGTGGCTCGGCGCGCTGGTGACGCATACATTGATTGACGC CAAAGCGGCGGCGCTCGCGCCGGCGCTGACGACGAACCAGACCGGCAAGTAA
Upstream 100 bases:
>100_bases CGCGTTGCGCCAGATCAATGCCCGATCGGAGGATCGACACACTATCTGATAATTATCCTGGGCTTGCGCGCCCCGACGAT GCGGCGCGGAGGAAACATCC
Downstream 100 bases:
>100_bases GCCGGCATCGACAGTAGACGGGAAACCTCTGGGAGGAAGCAGGATGGCCACGACCGGCCAAGCGCCGCCGCGTGCCGCGC GAGGAACGCGGGCGATACGT
Product: hypothetical protein
Products: NA
Alternate protein names: YeeE/YedE; Lipocalin-Related Protein And Bos/Can/Equ Allergen
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MNLEQFIERFGETAALTAGGLAVGIAFGACAERSKFCLRAAVIEFSEGSLGPKLAVWLLTFSAAVAATQAAIATGLLDVS EARQLAATGSLSGAAIGGLMFGAGMILSRGCASRLLVLSGTGNLRALVTGLILTIVAQASLRGVLSPAREFLSQLWTLPG GAARNLLSVAHVGSVVGASLGVFGLAVAFWLAWRNRIGIVNGVAAIGVGLAVTAGWLVTYTLSLYAFEPTTVKSVSFTGP SADTLMGLINSPSVPLGFDIGLVPGVFVGSLVAALIGREWKLQGFHDGLSMGRYAAGAFLMGFGGMLAGGCAVGAGVTGG SIFAVTAWLALAAMWLGALVTHTLIDAKAAALAPALTTNQTGK
Sequences:
>Translated_363_residues MNLEQFIERFGETAALTAGGLAVGIAFGACAERSKFCLRAAVIEFSEGSLGPKLAVWLLTFSAAVAATQAAIATGLLDVS EARQLAATGSLSGAAIGGLMFGAGMILSRGCASRLLVLSGTGNLRALVTGLILTIVAQASLRGVLSPAREFLSQLWTLPG GAARNLLSVAHVGSVVGASLGVFGLAVAFWLAWRNRIGIVNGVAAIGVGLAVTAGWLVTYTLSLYAFEPTTVKSVSFTGP SADTLMGLINSPSVPLGFDIGLVPGVFVGSLVAALIGREWKLQGFHDGLSMGRYAAGAFLMGFGGMLAGGCAVGAGVTGG SIFAVTAWLALAAMWLGALVTHTLIDAKAAALAPALTTNQTGK >Mature_363_residues MNLEQFIERFGETAALTAGGLAVGIAFGACAERSKFCLRAAVIEFSEGSLGPKLAVWLLTFSAAVAATQAAIATGLLDVS EARQLAATGSLSGAAIGGLMFGAGMILSRGCASRLLVLSGTGNLRALVTGLILTIVAQASLRGVLSPAREFLSQLWTLPG GAARNLLSVAHVGSVVGASLGVFGLAVAFWLAWRNRIGIVNGVAAIGVGLAVTAGWLVTYTLSLYAFEPTTVKSVSFTGP SADTLMGLINSPSVPLGFDIGLVPGVFVGSLVAALIGREWKLQGFHDGLSMGRYAAGAFLMGFGGMLAGGCAVGAGVTGG SIFAVTAWLALAAMWLGALVTHTLIDAKAAALAPALTTNQTGK
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788323, Length=353, Percent_Identity=25.4957507082153, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36586; Mature: 36586
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLEQFIERFGETAALTAGGLAVGIAFGACAERSKFCLRAAVIEFSEGSLGPKLAVWLLT CCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FSAAVAATQAAIATGLLDVSEARQLAATGSLSGAAIGGLMFGAGMILSRGCASRLLVLSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEC TGNLRALVTGLILTIVAQASLRGVLSPAREFLSQLWTLPGGAARNLLSVAHVGSVVGASL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GVFGLAVAFWLAWRNRIGIVNGVAAIGVGLAVTAGWLVTYTLSLYAFEPTTVKSVSFTGP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCC SADTLMGLINSPSVPLGFDIGLVPGVFVGSLVAALIGREWKLQGFHDGLSMGRYAAGAFL CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHH MGFGGMLAGGCAVGAGVTGGSIFAVTAWLALAAMWLGALVTHTLIDAKAAALAPALTTNQ HHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TGK CCC >Mature Secondary Structure MNLEQFIERFGETAALTAGGLAVGIAFGACAERSKFCLRAAVIEFSEGSLGPKLAVWLLT CCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FSAAVAATQAAIATGLLDVSEARQLAATGSLSGAAIGGLMFGAGMILSRGCASRLLVLSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEC TGNLRALVTGLILTIVAQASLRGVLSPAREFLSQLWTLPGGAARNLLSVAHVGSVVGASL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GVFGLAVAFWLAWRNRIGIVNGVAAIGVGLAVTAGWLVTYTLSLYAFEPTTVKSVSFTGP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCC SADTLMGLINSPSVPLGFDIGLVPGVFVGSLVAALIGREWKLQGFHDGLSMGRYAAGAFL CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHH MGFGGMLAGGCAVGAGVTGGSIFAVTAWLALAAMWLGALVTHTLIDAKAAALAPALTTNQ HHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TGK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA