Click here to switch to the map view.

The map label for this gene is ybgC [C]

Identifier: 86751371

GI number: 86751371

Start: 4852521

End: 4853012

Strand: Reverse

Name: ybgC [C]

Synonym: RPB_4268

Alternate gene names: 86751371

Gene position: 4853012-4852521 (Counterclockwise)

Preceding gene: 86751372

Following gene: 86751370

Centisome position: 91.02

GC content: 61.18

Gene sequence:

>492_bases
ATGACGACGTTGATAGCTTCCGCTTCTGCAATACAGGTAGAACAAGTGTCCCATCCCCTCGACGGCGCCATCATCGACGG
CGCTCACCACATGCAGGTCCGCGTCTATTACGAAGACACCGACTTCTCTGGCATCGTCTATCACGCCAACTATCTGCGCT
TCATGGAGCGCGGGCGGACCAATTATCTGCGGCTGCTCGGCGCGGCGCAGAGCGAATTGTTCGCCGAAGCCGAGAGCGAG
ACACCGGGCTTCGCCTTCGTGGTGCGGGCGATGCAGCTCGATTTCCTGAAGTCCGCCAAGATGGACGATCTGCTCGACGT
GATCACCCGCCCCGTAGAAGTCCGCGGTGCGTCGATCACCATGCAGCAGGAAATCAGACGGGACGAACTGCTGCTGCTGA
AAGCCAGCGTCAAGGTCGCCTTCGTCTCCGGCGGTCGCGCCCGCCCGATCCCGGTACCATTACGGGTGGCGATGAAAGCC
GACGTCGCCTGA

Upstream 100 bases:

>100_bases
GATGTCTCTCTCCACTCATCATACCCTGCCCTGTGCCGGGCATCCACGCCTTGCGGCAGACGTCGCGTGAAGAACGTGGA
TGGCCGGGACGAGCCCGGCC

Downstream 100 bases:

>100_bases
TCCTGTGCGCGGCGTTAGGGCGTTGCTAGGGAGACCCGGGCTTTGATGCTACACGGAACGCACCGGCGGTCCGCTACGTT
GGGATGCATCATGACCGAGA

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MTTLIASASAIQVEQVSHPLDGAIIDGAHHMQVRVYYEDTDFSGIVYHANYLRFMERGRTNYLRLLGAAQSELFAEAESE
TPGFAFVVRAMQLDFLKSAKMDDLLDVITRPVEVRGASITMQQEIRRDELLLLKASVKVAFVSGGRARPIPVPLRVAMKA
DVA

Sequences:

>Translated_163_residues
MTTLIASASAIQVEQVSHPLDGAIIDGAHHMQVRVYYEDTDFSGIVYHANYLRFMERGRTNYLRLLGAAQSELFAEAESE
TPGFAFVVRAMQLDFLKSAKMDDLLDVITRPVEVRGASITMQQEIRRDELLLLKASVKVAFVSGGRARPIPVPLRVAMKA
DVA
>Mature_162_residues
TTLIASASAIQVEQVSHPLDGAIIDGAHHMQVRVYYEDTDFSGIVYHANYLRFMERGRTNYLRLLGAAQSELFAEAESET
PGFAFVVRAMQLDFLKSAKMDDLLDVITRPVEVRGASITMQQEIRRDELLLLKASVKVAFVSGGRARPIPVPLRVAMKAD
VA

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=122, Percent_Identity=41.8032786885246, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 18081; Mature: 17950

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLIASASAIQVEQVSHPLDGAIIDGAHHMQVRVYYEDTDFSGIVYHANYLRFMERGRT
CCEEECCCCCEEHHHHCCCCCCEEECCCEEEEEEEEEECCCCCEEEEHHHHHHHHHCCCC
NYLRLLGAAQSELFAEAESETPGFAFVVRAMQLDFLKSAKMDDLLDVITRPVEVRGASIT
CEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCEEE
MQQEIRRDELLLLKASVKVAFVSGGRARPIPVPLRVAMKADVA
HHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TTLIASASAIQVEQVSHPLDGAIIDGAHHMQVRVYYEDTDFSGIVYHANYLRFMERGRT
CEEECCCCCEEHHHHCCCCCCEEECCCEEEEEEEEEECCCCCEEEEHHHHHHHHHCCCC
NYLRLLGAAQSELFAEAESETPGFAFVVRAMQLDFLKSAKMDDLLDVITRPVEVRGASIT
CEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCEEE
MQQEIRRDELLLLKASVKVAFVSGGRARPIPVPLRVAMKADVA
HHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]