| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751130
Identifier: 86751130
GI number: 86751130
Start: 4590420
End: 4590917
Strand: Direct
Name: 86751130
Synonym: RPB_4022
Alternate gene names: NA
Gene position: 4590420-4590917 (Clockwise)
Preceding gene: 86751129
Following gene: 86751131
Centisome position: 86.1
GC content: 66.67
Gene sequence:
>498_bases ATGTTCGGACCCAGGCGCGACGTGCCCGCGAACGGCCAGGAATCGGTGTGGGACTATCCGCGCCCGCCACGGCTGGAGCC GGTTTCCGCGCGGCTGCGGGTGATATTCAACGGCGAAACGATCGCCGACAGCATTTCGGGGTTTCGCGTGCTCGAGACCA GTCACCCGCCGGTCTACTACATTCCGCAGACCGATATCCGGATGGACCTGATGCGCAAGGCGTCGGGGTCGTCCTGGTGC GAGTTCAAGGGCGAAGCCCGCTACTGGTCGATCGAGGCCGGCGACCGCCGCTCCGACAACGCCGCCTGGAGCTATCCATC GCCCTCCCCCGCCTTCGCGCCGATCGCCGATCATCTCGCCTTCTACGCGTCGCGAGTCGACGCCTGCTTCGTCAGCGACG AGCGCGTGCAGCCGCAACAAGGCGATTTCTACGGCGGCTGGATCACCTCGCTGGTGGTCGGCCCGTTCAAGGGTGGCGCA GGAACGCGCGGATGGTAG
Upstream 100 bases:
>100_bases GCTTTGGCTCTATTGAATCGGGGCGAGCGTGCGCTCACGCGAGCGATCTGACTTATGGCGAATGGCGACGGTCGCCGCCG CCGAATAGAGAAACCGCACG
Downstream 100 bases:
>100_bases AGCAGAGCGGAACCACGGCGCCGGTGTGGTCGCCGGCGCTGAACGATCCCGCGCCGCGCGAGCTGTGCACCGATTGCGGC GTGTCGCGGATGAGCGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MFGPRRDVPANGQESVWDYPRPPRLEPVSARLRVIFNGETIADSISGFRVLETSHPPVYYIPQTDIRMDLMRKASGSSWC EFKGEARYWSIEAGDRRSDNAAWSYPSPSPAFAPIADHLAFYASRVDACFVSDERVQPQQGDFYGGWITSLVVGPFKGGA GTRGW
Sequences:
>Translated_165_residues MFGPRRDVPANGQESVWDYPRPPRLEPVSARLRVIFNGETIADSISGFRVLETSHPPVYYIPQTDIRMDLMRKASGSSWC EFKGEARYWSIEAGDRRSDNAAWSYPSPSPAFAPIADHLAFYASRVDACFVSDERVQPQQGDFYGGWITSLVVGPFKGGA GTRGW >Mature_165_residues MFGPRRDVPANGQESVWDYPRPPRLEPVSARLRVIFNGETIADSISGFRVLETSHPPVYYIPQTDIRMDLMRKASGSSWC EFKGEARYWSIEAGDRRSDNAAWSYPSPSPAFAPIADHLAFYASRVDACFVSDERVQPQQGDFYGGWITSLVVGPFKGGA GTRGW
Specific function: Unknown
COG id: COG2343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18438; Mature: 18438
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGPRRDVPANGQESVWDYPRPPRLEPVSARLRVIFNGETIADSISGFRVLETSHPPVYY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCEEEEECCCCCEEE IPQTDIRMDLMRKASGSSWCEFKGEARYWSIEAGDRRSDNAAWSYPSPSPAFAPIADHLA ECCCCHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHH FYASRVDACFVSDERVQPQQGDFYGGWITSLVVGPFKGGAGTRGW HHHHHHHEEEECCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCC >Mature Secondary Structure MFGPRRDVPANGQESVWDYPRPPRLEPVSARLRVIFNGETIADSISGFRVLETSHPPVYY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCEEEEECCCCCEEE IPQTDIRMDLMRKASGSSWCEFKGEARYWSIEAGDRRSDNAAWSYPSPSPAFAPIADHLA ECCCCHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHH FYASRVDACFVSDERVQPQQGDFYGGWITSLVVGPFKGGAGTRGW HHHHHHHEEEECCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA