| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751129
Identifier: 86751129
GI number: 86751129
Start: 4589847
End: 4590335
Strand: Direct
Name: 86751129
Synonym: RPB_4021
Alternate gene names: NA
Gene position: 4589847-4590335 (Clockwise)
Preceding gene: 86751128
Following gene: 86751130
Centisome position: 86.09
GC content: 69.12
Gene sequence:
>489_bases ATGCAGATCGAGCTCTGGCCGGCAGGCGGCGAACGGCGCTGGCGCCTGGTCACCGACGCGGTGATGGGCGGGGTCTCGCG GGGCACGCTGCAGGCGACCGAGCTCCACGGCCGTCTTGCGGCGCGGATGCGCGGCGCGGTGTCGACCGAGAACAACGGCG GCTTCATCCAGATCGCGATGGATCTGGCGCCGGACGGCGGCGCCTACGACGCCGGCGGCTTCACCGGCGTCGGCCTCGAG GTCGCGGGCAACGGCGAACGCTACGGCGTCCATCTGCGCACCACCGACATGCTCCGGCCGCAGCAATCCTACCGCGAAAG CTTCGTGACGTCGCCGGAACCGGCCGTGGTGCAGCTGCCGTTCGGGCAGTTTGTTCCGCATCGCATCGAGACCCCGTTGA ACCTCGCGCGGTTGCGCCGCATCGGGCTGGTCGCAATCGGCCGCGCCTTTGATGCAGATCTATCCGTCATGCGGCTTTGG CTCTATTGA
Upstream 100 bases:
>100_bases GGACCTACAAGGCGACCAACCACCCCCTCCCCGGCGCGCTCGCCAATGCGATCCTGTTCGCCTGGGCGATCGCGGTGACG TTCCCGATGGTGATCCGCTG
Downstream 100 bases:
>100_bases ATCGGGGCGAGCGTGCGCTCACGCGAGCGATCTGACTTATGGCGAATGGCGACGGTCGCCGCCGCCGAATAGAGAAACCG CACGATGTTCGGACCCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: CIA30 Family NADH Ubiquinone Oxidoreductase Subunit
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MQIELWPAGGERRWRLVTDAVMGGVSRGTLQATELHGRLAARMRGAVSTENNGGFIQIAMDLAPDGGAYDAGGFTGVGLE VAGNGERYGVHLRTTDMLRPQQSYRESFVTSPEPAVVQLPFGQFVPHRIETPLNLARLRRIGLVAIGRAFDADLSVMRLW LY
Sequences:
>Translated_162_residues MQIELWPAGGERRWRLVTDAVMGGVSRGTLQATELHGRLAARMRGAVSTENNGGFIQIAMDLAPDGGAYDAGGFTGVGLE VAGNGERYGVHLRTTDMLRPQQSYRESFVTSPEPAVVQLPFGQFVPHRIETPLNLARLRRIGLVAIGRAFDADLSVMRLW LY >Mature_162_residues MQIELWPAGGERRWRLVTDAVMGGVSRGTLQATELHGRLAARMRGAVSTENNGGFIQIAMDLAPDGGAYDAGGFTGVGLE VAGNGERYGVHLRTTDMLRPQQSYRESFVTSPEPAVVQLPFGQFVPHRIETPLNLARLRRIGLVAIGRAFDADLSVMRLW LY
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17724; Mature: 17724
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIELWPAGGERRWRLVTDAVMGGVSRGTLQATELHGRLAARMRGAVSTENNGGFIQIAM CEEEEECCCCCCEEEEEHHHHHCCCCCCEEEHHHHHHHHHHHHHCCEEECCCCCEEEEEE DLAPDGGAYDAGGFTGVGLEVAGNGERYGVHLRTTDMLRPQQSYRESFVTSPEPAVVQLP EECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEHHCCCCHHHHHHHHCCCCCCCEEEEC FGQFVPHRIETPLNLARLRRIGLVAIGRAFDADLSVMRLWLY CCCCCCHHCCCCCCHHHHHHHCEEEECCCCCCCHHHEEEECC >Mature Secondary Structure MQIELWPAGGERRWRLVTDAVMGGVSRGTLQATELHGRLAARMRGAVSTENNGGFIQIAM CEEEEECCCCCCEEEEEHHHHHCCCCCCEEEHHHHHHHHHHHHHCCEEECCCCCEEEEEE DLAPDGGAYDAGGFTGVGLEVAGNGERYGVHLRTTDMLRPQQSYRESFVTSPEPAVVQLP EECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEHHCCCCHHHHHHHHCCCCCCCEEEEC FGQFVPHRIETPLNLARLRRIGLVAIGRAFDADLSVMRLWLY CCCCCCHHCCCCCCHHHHHHHCEEEECCCCCCCHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA