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The map label for this gene is 86751131

Identifier: 86751131

GI number: 86751131

Start: 4590911

End: 4592143

Strand: Direct

Name: 86751131

Synonym: RPB_4023

Alternate gene names: NA

Gene position: 4590911-4592143 (Clockwise)

Preceding gene: 86751130

Following gene: 86751132

Centisome position: 86.11

GC content: 66.5

Gene sequence:

>1233_bases
ATGGTAGAGCAGAGCGGAACCACGGCGCCGGTGTGGTCGCCGGCGCTGAACGATCCCGCGCCGCGCGAGCTGTGCACCGA
TTGCGGCGTGTCGCGGATGAGCGATCCGAAGCAATGCGGACAGGCCTGCCAGTTCATCAAGCCGGACTATCCGGCGATGG
AACTCCAGGTGCACGGACGCAACCGCGATCCGTCGAAGCCGGATGAGGCCTTCTTCGGCCCGCACCGGCGGATGCTGCAG
GCTGCGATGAAGCAGCCGCGTGAGGGCGCGCAATGGACCGGGATCACCACGCGGATCGCTGAACGCCTCCTCGAAACCGG
CGCGGTCGATGCCGTGCTGACGATGGCGCCGGACCCGGCCGACAAATGGAAGCCGATGCCGGTGCTGGTGACCAGCCCCG
AGGGCATGGCGCAGTGCCGCGGGATGCGGATGGGCTATGCGCCGTCGCTGGCGCTGCTGGAGCCCGCGCGCGCCGCCGGC
TACAAGCGGATCGCGGTGATCGGCATTCCATGCCAGGTCTATGCGCTGCGCTCGCTGGAGCGGAAGCTCGGCTTCGAGCG
GCTGTATGTGATCGGCACGCCGTGCTCGGACAACACCACGACCGAAAATTTCCACGAGTTCCTCGATCTGTTGTCGGACC
GACCCGAGACCATCACCTATCTGGAATTCCGCGCCGACTATCATGTCGAGCTTCGCTTCACCGACGGCCGGGTGCAGGCG
ATTCCGTTCCTGTTGTTGCCGATCTCGAAACTGAAGCCGGACTTCTTCCCGATCACCTGCCGCACCTGCGTCGACTACAC
CAATACGCTGGCCGACATCACCGTCGGCTACATGGCCGGCCGCGGCGAGCAATGGCTGCTGGTGCGCAACCAGCGCGGCG
AGGAACTGCTCGACCTGCTCGGCGACGAAGTGCGGCTGAGCGAGCCGACCAGCGCGGGGAACCGCACCGCGCCGGTGAAA
GGCTTCCTGAAGAACACCGAGCTCGCCGCCGGCGGCCTGCCGGTGCGCGGGATGCCGAACTGGCTGCGGCCGTTCATGGG
CTGGCTGATGCCGAAGGTCGGCCCGCGCGGGCTCGAATTCGGCCGCGCCCGGGTCGAGATGAAGGCGGTCGAAACCGTGC
TGCATCTGCGCCGAAACTACAAACAGAAGATCAAGAACATGGTACCGGCGCACGTCTGGGCGCTGGTCAAACCCTACGGG
CTCGAGCCCGACGACTCCGAGCGGCGCAACTAA

Upstream 100 bases:

>100_bases
TCAGCGACGAGCGCGTGCAGCCGCAACAAGGCGATTTCTACGGCGGCTGGATCACCTCGCTGGTGGTCGGCCCGTTCAAG
GGTGGCGCAGGAACGCGCGG

Downstream 100 bases:

>100_bases
CACCTCACCTGCGGCAGGTCCGCCACGGAACCGGTCTGTCAGAACCAAGTTAGCGCGCCGGGAGGCGGCGGGCCGATATT
CCGTCGCGTGACTCCCGAAC

Product: coenzyme F420 hydrogenase/dehydrogenase beta subunit-like

Products: reduced coenzyme F420

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MVEQSGTTAPVWSPALNDPAPRELCTDCGVSRMSDPKQCGQACQFIKPDYPAMELQVHGRNRDPSKPDEAFFGPHRRMLQ
AAMKQPREGAQWTGITTRIAERLLETGAVDAVLTMAPDPADKWKPMPVLVTSPEGMAQCRGMRMGYAPSLALLEPARAAG
YKRIAVIGIPCQVYALRSLERKLGFERLYVIGTPCSDNTTTENFHEFLDLLSDRPETITYLEFRADYHVELRFTDGRVQA
IPFLLLPISKLKPDFFPITCRTCVDYTNTLADITVGYMAGRGEQWLLVRNQRGEELLDLLGDEVRLSEPTSAGNRTAPVK
GFLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGLEFGRARVEMKAVETVLHLRRNYKQKIKNMVPAHVWALVKPYG
LEPDDSERRN

Sequences:

>Translated_410_residues
MVEQSGTTAPVWSPALNDPAPRELCTDCGVSRMSDPKQCGQACQFIKPDYPAMELQVHGRNRDPSKPDEAFFGPHRRMLQ
AAMKQPREGAQWTGITTRIAERLLETGAVDAVLTMAPDPADKWKPMPVLVTSPEGMAQCRGMRMGYAPSLALLEPARAAG
YKRIAVIGIPCQVYALRSLERKLGFERLYVIGTPCSDNTTTENFHEFLDLLSDRPETITYLEFRADYHVELRFTDGRVQA
IPFLLLPISKLKPDFFPITCRTCVDYTNTLADITVGYMAGRGEQWLLVRNQRGEELLDLLGDEVRLSEPTSAGNRTAPVK
GFLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGLEFGRARVEMKAVETVLHLRRNYKQKIKNMVPAHVWALVKPYG
LEPDDSERRN
>Mature_410_residues
MVEQSGTTAPVWSPALNDPAPRELCTDCGVSRMSDPKQCGQACQFIKPDYPAMELQVHGRNRDPSKPDEAFFGPHRRMLQ
AAMKQPREGAQWTGITTRIAERLLETGAVDAVLTMAPDPADKWKPMPVLVTSPEGMAQCRGMRMGYAPSLALLEPARAAG
YKRIAVIGIPCQVYALRSLERKLGFERLYVIGTPCSDNTTTENFHEFLDLLSDRPETITYLEFRADYHVELRFTDGRVQA
IPFLLLPISKLKPDFFPITCRTCVDYTNTLADITVGYMAGRGEQWLLVRNQRGEELLDLLGDEVRLSEPTSAGNRTAPVK
GFLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGLEFGRARVEMKAVETVLHLRRNYKQKIKNMVPAHVWALVKPYG
LEPDDSERRN

Specific function: Unknown

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007516
- InterPro:   IPR007525 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: 1.12.98.1

Molecular weight: Translated: 46000; Mature: 46000

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQSGTTAPVWSPALNDPAPRELCTDCGVSRMSDPKQCGQACQFIKPDYPAMELQVHGR
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECC
NRDPSKPDEAFFGPHRRMLQAAMKQPREGAQWTGITTRIAERLLETGAVDAVLTMAPDPA
CCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCH
DKWKPMPVLVTSPEGMAQCRGMRMGYAPSLALLEPARAAGYKRIAVIGIPCQVYALRSLE
HHCCCCEEEEECCCHHHHHCCCCCCCCCCHHHCCCHHHCCCEEEEEEECCHHHHHHHHHH
RKLGFERLYVIGTPCSDNTTTENFHEFLDLLSDRPETITYLEFRADYHVELRFTDGRVQA
HHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEECCCEEE
IPFLLLPISKLKPDFFPITCRTCVDYTNTLADITVGYMAGRGEQWLLVRNQRGEELLDLL
HHHHEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHC
GDEVRLSEPTSAGNRTAPVKGFLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGLEF
CCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
GRARVEMKAVETVLHLRRNYKQKIKNMVPAHVWALVKPYGLEPDDSERRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVEQSGTTAPVWSPALNDPAPRELCTDCGVSRMSDPKQCGQACQFIKPDYPAMELQVHGR
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECC
NRDPSKPDEAFFGPHRRMLQAAMKQPREGAQWTGITTRIAERLLETGAVDAVLTMAPDPA
CCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCH
DKWKPMPVLVTSPEGMAQCRGMRMGYAPSLALLEPARAAGYKRIAVIGIPCQVYALRSLE
HHCCCCEEEEECCCHHHHHCCCCCCCCCCHHHCCCHHHCCCEEEEEEECCHHHHHHHHHH
RKLGFERLYVIGTPCSDNTTTENFHEFLDLLSDRPETITYLEFRADYHVELRFTDGRVQA
HHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEECCCEEE
IPFLLLPISKLKPDFFPITCRTCVDYTNTLADITVGYMAGRGEQWLLVRNQRGEELLDLL
HHHHEEEHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHC
GDEVRLSEPTSAGNRTAPVKGFLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGLEF
CCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
GRARVEMKAVETVLHLRRNYKQKIKNMVPAHVWALVKPYGLEPDDSERRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2; coenzyme F420

Specific reaction: H2 + coenzyme F420 = reduced coenzyme F420

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]