| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is bchP [H]
Identifier: 86751098
GI number: 86751098
Start: 4556625
End: 4557827
Strand: Reverse
Name: bchP [H]
Synonym: RPB_3990
Alternate gene names: 86751098
Gene position: 4557827-4556625 (Counterclockwise)
Preceding gene: 86751099
Following gene: 86751097
Centisome position: 85.49
GC content: 66.58
Gene sequence:
>1203_bases ATGAGCGAGAATTCCGAGGTCTACGACGTCGTCGTTGTCGGCGGTGGTCCGTCCGGCGCCACTGCGGCCTGCGATCTCGC GCGGGCCGGCAAGCGCGTCGTGTTGCTCGACCGCGCCGGTCGCATCAAGCCCTGCGGCGGTGCGATCCCGCCGCGGGCCA TCCGCGATTTTGCCATTCCCGACAGCATGCTGGTCGCCAAGATCAATGCCGCGCGGATGGTGTCGCCGACCGACGTCGAA GTCGATATGCCGATCGACGGTGGCTTCGTCGGCATGGTCGATCGCGAGCATTTCGACGAATGGCTGCGCCAGCGCGCCGC AAATGTCGGCGCCGAGCGCCGCACCGGACTTTTCCGGCGCTTCACCCGCGACGAGAGCGGCGTCAACATCGTGCACTACG AGGAGCGTCTACCCGACGGCACGATGCAGGACCAGACGGTCCGGGCGCGGGCGATCATCGGCGCCGACGGCGCGGTGTCG GCGGTCGCGCGGCAGTTCTTGCCGGACGCCGACCGGGTTCCGTTCGTGTTCGCCTATCACGAGATCATCAAGGCGCCGCA GCCGGGACAGGCCGCGTACGAGAGCCGGCGTTGCGACGTGTACTACCAGGGCAAGGTGTCGCCGGACTTCTACGGCTGGG TGTTCCCGCATGGCGACACCGTCAGCGTCGGCACCGGCTCGATGCACAAGGGCTTCTCGCTTCGCGACTCGGTCGCCGAG TTGCGCAAGCAGACCGGGCTCGACGAGGTCGAGACCATCCGAAAGGAAGGCGCACCGATCCCGCTGCATCCGCTGCCGCG CTGGGACGACGGTCACAGCGTGCTGCTCGCCGGCGATGCGGCCGGCGTGGTGGCGCCGGCGTCGGGCGAGGGCATCTACT ACGCGTTGGTCGGCGGCCGGCTTGCGGCCGAGGCCGTCGGTGAATTTCTCGACACAGCGGACGCGAAGGCGCTGAAGCTG GCACGCAAGCGTTTCATGCGCGCGAACGGCTCGGTGTTCCGGATCCTCGGCCTGATGCAGTGGTACTGGTACGCCAACGA CAAACGCCGCGAGCAATTCGTCAGTATCTGCCGTGATCAAGACGTCCAGAAGCTGACCTGGGACGCCTACATGAACAAGA AACTGGTCCGCGCCAAGCCGATCGCCCATGTCCGGATCTTCTTCAAGAATCTGGCCCACATGACCGGCCTGGCTTCGGTG TAA
Upstream 100 bases:
>100_bases GCCGCGATGGCCGTCTGGGTGCATCGCGCCCAGGTCCGTTCTGCCCGAAATCAGAGTCAAGTCGTCGGTCTGTCCAACGC CGCGGTTGCGGGAGGGTGAG
Downstream 100 bases:
>100_bases CCTCGGCAGGCTCGACTTGAATCCTATTTTCGTTGCCTTTTCCGTCGCGATCCTGGTTGGGCTGCTCGGCGGATCTCTGA CCGACACCGGGATCTGGTAT
Product: geranylgeranyl reductase
Products: NA
Alternate protein names: Geranylgeranyl reductase [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSENSEVYDVVVVGGGPSGATAACDLARAGKRVVLLDRAGRIKPCGGAIPPRAIRDFAIPDSMLVAKINAARMVSPTDVE VDMPIDGGFVGMVDREHFDEWLRQRAANVGAERRTGLFRRFTRDESGVNIVHYEERLPDGTMQDQTVRARAIIGADGAVS AVARQFLPDADRVPFVFAYHEIIKAPQPGQAAYESRRCDVYYQGKVSPDFYGWVFPHGDTVSVGTGSMHKGFSLRDSVAE LRKQTGLDEVETIRKEGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIYYALVGGRLAAEAVGEFLDTADAKALKL ARKRFMRANGSVFRILGLMQWYWYANDKRREQFVSICRDQDVQKLTWDAYMNKKLVRAKPIAHVRIFFKNLAHMTGLASV
Sequences:
>Translated_400_residues MSENSEVYDVVVVGGGPSGATAACDLARAGKRVVLLDRAGRIKPCGGAIPPRAIRDFAIPDSMLVAKINAARMVSPTDVE VDMPIDGGFVGMVDREHFDEWLRQRAANVGAERRTGLFRRFTRDESGVNIVHYEERLPDGTMQDQTVRARAIIGADGAVS AVARQFLPDADRVPFVFAYHEIIKAPQPGQAAYESRRCDVYYQGKVSPDFYGWVFPHGDTVSVGTGSMHKGFSLRDSVAE LRKQTGLDEVETIRKEGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIYYALVGGRLAAEAVGEFLDTADAKALKL ARKRFMRANGSVFRILGLMQWYWYANDKRREQFVSICRDQDVQKLTWDAYMNKKLVRAKPIAHVRIFFKNLAHMTGLASV >Mature_399_residues SENSEVYDVVVVGGGPSGATAACDLARAGKRVVLLDRAGRIKPCGGAIPPRAIRDFAIPDSMLVAKINAARMVSPTDVEV DMPIDGGFVGMVDREHFDEWLRQRAANVGAERRTGLFRRFTRDESGVNIVHYEERLPDGTMQDQTVRARAIIGADGAVSA VARQFLPDADRVPFVFAYHEIIKAPQPGQAAYESRRCDVYYQGKVSPDFYGWVFPHGDTVSVGTGSMHKGFSLRDSVAEL RKQTGLDEVETIRKEGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIYYALVGGRLAAEAVGEFLDTADAKALKLA RKRFMRANGSVFRILGLMQWYWYANDKRREQFVSICRDQDVQKLTWDAYMNKKLVRAKPIAHVRIFFKNLAHMTGLASV
Specific function: Catalyzes the stepwise hydrogenation of geranylgeraniol to phytol during bacteriochlorophyll A (BchlA) biosynthesis [H]
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082319, Length=311, Percent_Identity=27.9742765273312, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010253 - InterPro: IPR013027 - InterPro: IPR011777 - InterPro: IPR003042 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: =1.3.1.83 [H]
Molecular weight: Translated: 44036; Mature: 43905
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENSEVYDVVVVGGGPSGATAACDLARAGKRVVLLDRAGRIKPCGGAIPPRAIRDFAIP CCCCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCC DSMLVAKINAARMVSPTDVEVDMPIDGGFVGMVDREHFDEWLRQRAANVGAERRTGLFRR CCCEEEEECHHHCCCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH FTRDESGVNIVHYEERLPDGTMQDQTVRARAIIGADGAVSAVARQFLPDADRVPFVFAYH HHCCCCCCEEEEEHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEH EIIKAPQPGQAAYESRRCDVYYQGKVSPDFYGWVFPHGDTVSVGTGSMHKGFSLRDSVAE HHHCCCCCCHHHHHCCCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHH LRKQTGLDEVETIRKEGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIYYALVGGR HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEEEECCH LAAEAVGEFLDTADAKALKLARKRFMRANGSVFRILGLMQWYWYANDKRREQFVSICRDQ HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC DVQKLTWDAYMNKKLVRAKPIAHVRIFFKNLAHMTGLASV CHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SENSEVYDVVVVGGGPSGATAACDLARAGKRVVLLDRAGRIKPCGGAIPPRAIRDFAIP CCCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCC DSMLVAKINAARMVSPTDVEVDMPIDGGFVGMVDREHFDEWLRQRAANVGAERRTGLFRR CCCEEEEECHHHCCCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHH FTRDESGVNIVHYEERLPDGTMQDQTVRARAIIGADGAVSAVARQFLPDADRVPFVFAYH HHCCCCCCEEEEEHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEH EIIKAPQPGQAAYESRRCDVYYQGKVSPDFYGWVFPHGDTVSVGTGSMHKGFSLRDSVAE HHHCCCCCCHHHHHCCCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHH LRKQTGLDEVETIRKEGAPIPLHPLPRWDDGHSVLLAGDAAGVVAPASGEGIYYALVGGR HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEEEECCH LAAEAVGEFLDTADAKALKLARKRFMRANGSVFRILGLMQWYWYANDKRREQFVSICRDQ HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC DVQKLTWDAYMNKKLVRAKPIAHVRIFFKNLAHMTGLASV CHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA