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The map label for this gene is 86751097

Identifier: 86751097

GI number: 86751097

Start: 4556141

End: 4556608

Strand: Reverse

Name: 86751097

Synonym: RPB_3989

Alternate gene names: NA

Gene position: 4556608-4556141 (Counterclockwise)

Preceding gene: 86751098

Following gene: 86751096

Centisome position: 85.46

GC content: 62.82

Gene sequence:

>468_bases
TTGAATCCTATTTTCGTTGCCTTTTCCGTCGCGATCCTGGTTGGGCTGCTCGGCGGATCTCTGACCGACACCGGGATCTG
GTATCAGAGCCTGATCAAGCCCTGGTGGCAGCCGCCGGACTGGGCCTTCGGTCCGGCTTGGACGGTGATCTTCGCGCTCG
CCGCAATGTCTGCCATCCACGCCTGGCGTGGGGCTCACAGCAGGGCGCAGCGCGACTGGGTGATCGGCATCTTCGCCGCC
AACGGGTTCTTCAACCTGCTGTGGAGCATGCTGTTCTTCACCGTGCAGCGGCCGGACTGGGCGTTGCTCGAAGTGCCGCT
GCTGTGGCTGTCGGTGCTGGTCGGAATCGTGGTGTTCTGGCGCAGCGCCCGGACCGCGACCTACTATTTGATGCCGTATC
TGCTCTGGGTCAGCTTCGCGGCCTATCTGAACTGGACCGTGGTGCGACTCAACGCACCGTTCTCCTGA

Upstream 100 bases:

>100_bases
AAACTGGTCCGCGCCAAGCCGATCGCCCATGTCCGGATCTTCTTCAAGAATCTGGCCCACATGACCGGCCTGGCTTCGGT
GTAACCTCGGCAGGCTCGAC

Downstream 100 bases:

>100_bases
TCGCCTGATTGCGCGATGGCTCTCGCCCGCCGGTGTTCTCCATGTCGATGATGTCGGATTTGTTCGCGAGTGGCTTCATC
GTGGACGCCGTGCTGATCGT

Product: TspO and MBR like proteins

Products: NA

Alternate protein names: Tryptophan-Rich Sensory Protein; TspO And MBR Like Proteins; TspO/MBR Family Protein; Integral Membrane Protein; CrtK Protein; Peripheral-Type Benzodiazepine Receptor; TspO Or MBR Like Protein; Benzodiazepine Receptor TspO; Benzodiazepine Receptor/Sensory Transduction Protein; Benzodiazepine Receptor; TspO- And MBR-Like Protein; Protein CrtK; TspO-And MBR-Like Protein; Tspo/Mbr Family Protein; Tryptophan Rich Sensory Protein; TspO And MBR Related Proteins; Sensory Protein; TspO And MBR-Like Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNPIFVAFSVAILVGLLGGSLTDTGIWYQSLIKPWWQPPDWAFGPAWTVIFALAAMSAIHAWRGAHSRAQRDWVIGIFAA
NGFFNLLWSMLFFTVQRPDWALLEVPLLWLSVLVGIVVFWRSARTATYYLMPYLLWVSFAAYLNWTVVRLNAPFS

Sequences:

>Translated_155_residues
MNPIFVAFSVAILVGLLGGSLTDTGIWYQSLIKPWWQPPDWAFGPAWTVIFALAAMSAIHAWRGAHSRAQRDWVIGIFAA
NGFFNLLWSMLFFTVQRPDWALLEVPLLWLSVLVGIVVFWRSARTATYYLMPYLLWVSFAAYLNWTVVRLNAPFS
>Mature_155_residues
MNPIFVAFSVAILVGLLGGSLTDTGIWYQSLIKPWWQPPDWAFGPAWTVIFALAAMSAIHAWRGAHSRAQRDWVIGIFAA
NGFFNLLWSMLFFTVQRPDWALLEVPLLWLSVLVGIVVFWRSARTATYYLMPYLLWVSFAAYLNWTVVRLNAPFS

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI74275350, Length=150, Percent_Identity=28, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17700; Mature: 17700

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIFVAFSVAILVGLLGGSLTDTGIWYQSLIKPWWQPPDWAFGPAWTVIFALAAMSAIH
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AWRGAHSRAQRDWVIGIFAANGFFNLLWSMLFFTVQRPDWALLEVPLLWLSVLVGIVVFW
HHHCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RSARTATYYLMPYLLWVSFAAYLNWTVVRLNAPFS
HCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC
>Mature Secondary Structure
MNPIFVAFSVAILVGLLGGSLTDTGIWYQSLIKPWWQPPDWAFGPAWTVIFALAAMSAIH
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AWRGAHSRAQRDWVIGIFAANGFFNLLWSMLFFTVQRPDWALLEVPLLWLSVLVGIVVFW
HHHCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RSARTATYYLMPYLLWVSFAAYLNWTVVRLNAPFS
HCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA