| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751099
Identifier: 86751099
GI number: 86751099
Start: 4557829
End: 4559172
Strand: Reverse
Name: 86751099
Synonym: RPB_3991
Alternate gene names: NA
Gene position: 4559172-4557829 (Counterclockwise)
Preceding gene: 86751100
Following gene: 86751098
Centisome position: 85.51
GC content: 67.56
Gene sequence:
>1344_bases ATGATGCGACCATTGTCTTGGCTTGGCATTGTCCGAATGGGTCTGGTGCAAACCGGCCTTGGCGCCATCGTCGTGCTCAC CACCTCGACCTTGAACCGCGTGATGGTGGTGGAACTGGCACTTCCGGCGATGCTGCCGGGCGCGCTGGTCGCGATCCACT ATGCGCTGCAGGTGTTCCGCCCGGCCTGGGGCCACGGCTCCGACCGCGGCGCGCGGCGGACGCCATGGATCATCGGCGGC ATGGCCGTGCTCGCGCTCGGCGGCTTCCTCGCTGCAGTCGCGACGGCATGGATGAGCACGCAGCCGCTGTTCGGCGTGGC TCTCGCCATCGTCGCGTTTTGTCTGATCGGCGGTGGCGTCGGCGCGGCCGGAACATCGCTGTTGGTGCTGCTCGCCAAGC GCACCGACGAACGCCGACGCGCGGCGGCGGCGACCATAGTGTGGGTGATGATGATCGCAGGATTTATCGTCACCACCGGC TTCGCCGGCCATCTGCTCGATCCGTTCTCGCCGGCGCGGCTGGTCGCGGTGTCGGGCGGGGTCTCGGTGATCGCGATGCT GCTCACTTTCGTCGGCGTCTGGGGCATCGAAGGCAAAGCGGCCACCGCCGAGGTGGTGGCAAAGCAAGCGGCCGACAAGG GCTCGTTCCGCGCCGCCTTCAAGGAAGTCTGGGCCGAGCCGCAGGCGCGCCGGTTCGCGATCTTCGTATTCGTGTCGATG CTCGCCTACAGCGCTCAGGACCTGATCCTGGAGCCGTTCGCCGGTGCAGTGTTCGGTTTCACGCCGGGCGAGACCACCAA ATTGTCGAGCGTGCAGCATGGCGGCACGCTGATCGGCATGGCGCTCGTGCCGCTGATCGGCGCGCTGTTTCCTCGATCGC GCGGCAATTTGCAGATCTGGACCGTCGGCGGCTGCATCGCCTCGGCGATCGCCTTGCTGGGCCTGTCGACGGCTGCGATG GTCGGGCCGTCCTGGCCGCTGCGGGAAACCGTGTTTCTGCTCGGCATCACCAACGGCGCCTATGCGGTCGCGGCGATCGG CTCGATGATGGAACTGGTCACCGCCGGCGGCGAAAAGCGCGAAGGCGTCCGCATGGGGTTGTGGGGCGCGGCGCAGGCGA TCGCCTTCGGCATCGGCGGCTTCGTCGGGACTCTGGCCAGCGACGTCGCGCGCTTCATCCTGTCGTCGCCGGCGCTGTCC TATGCGTCGGTGTTCGCCGCTGAGGCGGGACTGTTCATTGCCTCCGCCGCGATGGCCGTCTGGGTGCATCGCGCCCAGGT CCGTTCTGCCCGAAATCAGAGTCAAGTCGTCGGTCTGTCCAACGCCGCGGTTGCGGGAGGGTGA
Upstream 100 bases:
>100_bases GGTGTCGCGCTCTATGTCATGGGCATGATGGCGAGTGCGGTCGCGGTCTCGCCGTTCGGACCGTCCGCATGAACGCTCAC TCGATCGGAGGCGCCTGATC
Downstream 100 bases:
>100_bases GATGAGCGAGAATTCCGAGGTCTACGACGTCGTCGTTGTCGGCGGTGGTCCGTCCGGCGCCACTGCGGCCTGCGATCTCG CGCGGGCCGGCAAGCGCGTC
Product: light harvesting pigment MFS transporter Bch2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MMRPLSWLGIVRMGLVQTGLGAIVVLTTSTLNRVMVVELALPAMLPGALVAIHYALQVFRPAWGHGSDRGARRTPWIIGG MAVLALGGFLAAVATAWMSTQPLFGVALAIVAFCLIGGGVGAAGTSLLVLLAKRTDERRRAAAATIVWVMMIAGFIVTTG FAGHLLDPFSPARLVAVSGGVSVIAMLLTFVGVWGIEGKAATAEVVAKQAADKGSFRAAFKEVWAEPQARRFAIFVFVSM LAYSAQDLILEPFAGAVFGFTPGETTKLSSVQHGGTLIGMALVPLIGALFPRSRGNLQIWTVGGCIASAIALLGLSTAAM VGPSWPLRETVFLLGITNGAYAVAAIGSMMELVTAGGEKREGVRMGLWGAAQAIAFGIGGFVGTLASDVARFILSSPALS YASVFAAEAGLFIASAAMAVWVHRAQVRSARNQSQVVGLSNAAVAGG
Sequences:
>Translated_447_residues MMRPLSWLGIVRMGLVQTGLGAIVVLTTSTLNRVMVVELALPAMLPGALVAIHYALQVFRPAWGHGSDRGARRTPWIIGG MAVLALGGFLAAVATAWMSTQPLFGVALAIVAFCLIGGGVGAAGTSLLVLLAKRTDERRRAAAATIVWVMMIAGFIVTTG FAGHLLDPFSPARLVAVSGGVSVIAMLLTFVGVWGIEGKAATAEVVAKQAADKGSFRAAFKEVWAEPQARRFAIFVFVSM LAYSAQDLILEPFAGAVFGFTPGETTKLSSVQHGGTLIGMALVPLIGALFPRSRGNLQIWTVGGCIASAIALLGLSTAAM VGPSWPLRETVFLLGITNGAYAVAAIGSMMELVTAGGEKREGVRMGLWGAAQAIAFGIGGFVGTLASDVARFILSSPALS YASVFAAEAGLFIASAAMAVWVHRAQVRSARNQSQVVGLSNAAVAGG >Mature_447_residues MMRPLSWLGIVRMGLVQTGLGAIVVLTTSTLNRVMVVELALPAMLPGALVAIHYALQVFRPAWGHGSDRGARRTPWIIGG MAVLALGGFLAAVATAWMSTQPLFGVALAIVAFCLIGGGVGAAGTSLLVLLAKRTDERRRAAAATIVWVMMIAGFIVTTG FAGHLLDPFSPARLVAVSGGVSVIAMLLTFVGVWGIEGKAATAEVVAKQAADKGSFRAAFKEVWAEPQARRFAIFVFVSM LAYSAQDLILEPFAGAVFGFTPGETTKLSSVQHGGTLIGMALVPLIGALFPRSRGNLQIWTVGGCIASAIALLGLSTAAM VGPSWPLRETVFLLGITNGAYAVAAIGSMMELVTAGGEKREGVRMGLWGAAQAIAFGIGGFVGTLASDVARFILSSPALS YASVFAAEAGLFIASAAMAVWVHRAQVRSARNQSQVVGLSNAAVAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004896 [H]
Pfam domain/function: PF03209 PUCC [H]
EC number: NA
Molecular weight: Translated: 46141; Mature: 46141
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPLSWLGIVRMGLVQTGLGAIVVLTTSTLNRVMVVELALPAMLPGALVAIHYALQVFR CCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC PAWGHGSDRGARRTPWIIGGMAVLALGGFLAAVATAWMSTQPLFGVALAIVAFCLIGGGV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC GAAGTSLLVLLAKRTDERRRAAAATIVWVMMIAGFIVTTGFAGHLLDPFSPARLVAVSGG CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCC VSVIAMLLTFVGVWGIEGKAATAEVVAKQAADKGSFRAAFKEVWAEPQARRFAIFVFVSM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH LAYSAQDLILEPFAGAVFGFTPGETTKLSSVQHGGTLIGMALVPLIGALFPRSRGNLQIW HHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCEEEE TVGGCIASAIALLGLSTAAMVGPSWPLRETVFLLGITNGAYAVAAIGSMMELVTAGGEKR EEHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHCCCCCC EGVRMGLWGAAQAIAFGIGGFVGTLASDVARFILSSPALSYASVFAAEAGLFIASAAMAV CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH WVHRAQVRSARNQSQVVGLSNAAVAGG HHHHHHHHHCCCCHHEEECCCCCCCCC >Mature Secondary Structure MMRPLSWLGIVRMGLVQTGLGAIVVLTTSTLNRVMVVELALPAMLPGALVAIHYALQVFR CCCCHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC PAWGHGSDRGARRTPWIIGGMAVLALGGFLAAVATAWMSTQPLFGVALAIVAFCLIGGGV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC GAAGTSLLVLLAKRTDERRRAAAATIVWVMMIAGFIVTTGFAGHLLDPFSPARLVAVSGG CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCC VSVIAMLLTFVGVWGIEGKAATAEVVAKQAADKGSFRAAFKEVWAEPQARRFAIFVFVSM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH LAYSAQDLILEPFAGAVFGFTPGETTKLSSVQHGGTLIGMALVPLIGALFPRSRGNLQIW HHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCEEEE TVGGCIASAIALLGLSTAAMVGPSWPLRETVFLLGITNGAYAVAAIGSMMELVTAGGEKR EEHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHCCCCCC EGVRMGLWGAAQAIAFGIGGFVGTLASDVARFILSSPALSYASVFAAEAGLFIASAAMAV CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH WVHRAQVRSARNQSQVVGLSNAAVAGG HHHHHHHHHCCCCHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA