| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751036
Identifier: 86751036
GI number: 86751036
Start: 4482612
End: 4482929
Strand: Direct
Name: 86751036
Synonym: RPB_3928
Alternate gene names: NA
Gene position: 4482612-4482929 (Clockwise)
Preceding gene: 86751035
Following gene: 86751039
Centisome position: 84.08
GC content: 65.72
Gene sequence:
>318_bases ATGGCTCATACCCTCGAACAGAAAATCATCGGCTTGCTCGAGCAGGAGACCGCGTTGCGGCAATGGCTGGAGCAGATGCG CGCGCTGATCAAGGATTCGCGCGGCGTCACCGTGATCGCCGGGCTCTCGCCCGCGGAGACCGAGGAATTCCTGCGGCTCG ATCCGCAGATCCGGGCGCATCGCGGCGCGATGAGCCAGACCGAGTTCGAAGCGGCGCGCGAACGCCACGCCGAACTGAAG GACAAGATCGATACCGCGCTACAGGACAATGCGATCGAAAGCCTCAGCGACTGGGGCGGCGCCGCCGCGCGCGGCTGA
Upstream 100 bases:
>100_bases CGCACCGCACCAATTGATCCGGCACAAAGCGGCGGCCGCGGCGGTCGGTTAGGCGACTTGGCAGATGGCTCAGCAGACCA TCGGCGGGAGGCGAAGGACC
Downstream 100 bases:
>100_bases GACCGACAGCGTCTCGCGCGAAGCCGAGACCGGTTCGCGTCGAGACGACACCTCATCCAGAATCGAAAGCGCCGGCTCTG AGTCGATCAGCGCCGGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MAHTLEQKIIGLLEQETALRQWLEQMRALIKDSRGVTVIAGLSPAETEEFLRLDPQIRAHRGAMSQTEFEAARERHAELK DKIDTALQDNAIESLSDWGGAAARG
Sequences:
>Translated_105_residues MAHTLEQKIIGLLEQETALRQWLEQMRALIKDSRGVTVIAGLSPAETEEFLRLDPQIRAHRGAMSQTEFEAARERHAELK DKIDTALQDNAIESLSDWGGAAARG >Mature_104_residues AHTLEQKIIGLLEQETALRQWLEQMRALIKDSRGVTVIAGLSPAETEEFLRLDPQIRAHRGAMSQTEFEAARERHAELKD KIDTALQDNAIESLSDWGGAAARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11709; Mature: 11578
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTLEQKIIGLLEQETALRQWLEQMRALIKDSRGVTVIAGLSPAETEEFLRLDPQIRAH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHH RGAMSQTEFEAARERHAELKDKIDTALQDNAIESLSDWGGAAARG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AHTLEQKIIGLLEQETALRQWLEQMRALIKDSRGVTVIAGLSPAETEEFLRLDPQIRAH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHH RGAMSQTEFEAARERHAELKDKIDTALQDNAIESLSDWGGAAARG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA