Click here to switch to the map view.

The map label for this gene is 86751035

Identifier: 86751035

GI number: 86751035

Start: 4481684

End: 4482385

Strand: Direct

Name: 86751035

Synonym: RPB_3927

Alternate gene names: NA

Gene position: 4481684-4482385 (Clockwise)

Preceding gene: 86751034

Following gene: 86751036

Centisome position: 84.06

GC content: 69.66

Gene sequence:

>702_bases
GTGATCCGACCCGTCCGACCCAAGGAGATCCACCTCGTCAATCGGATCGGGTGGCTGCGCGCAGCGGTGCTCGGGGCCAA
TGACGGGATCATCTCGACGGCGAGCCTGATCGTCGGCGTCGCCGCGGCGACACCGAACCGGGACGAGGTGCTGGTAGCCG
GCATCGCCGGGCTTGTGGCCGGCGCAATGTCGATGGCGGCGGGCGAATACGTCTCGGTGAGCTCGCAATCCGATACCGAA
AACGCCGACCTGCGGCGCGAGGCCCGCGAGCTGCGCGACGATCCCGGCGGCGAACTCGACGAACTCGCCGAGATCTACGT
CAAGCGCGGCGTCGACCCGATGCTGGCCCGACAGGTGGCGGCGCAAATGATGAAGTCGGATGCGCTCGGCGCGCACGCGC
GCGACGAACTCGGCATCACGCAAACGACGACCGCCCGGCCGGTGCAGGCGGCCCTGACTTCGGCGCTGACATTCACGGTG
GGCGCCGCGATGCCGCTGTCGATGGTGATCATCGCGCCTGCGAACCTGCTGATCCAGCTGACGTCGGCCGCTTCACTCGG
CTTCCTCGCCGTGCTCGGTGCCGTCGGCGCCAAGGCGGGCGGGGCCGGCATCTTGCGCGCCACCACCCGCGTGACGTTCT
GGGGCGCGCTGGCGTTGGGGATCACGGCCGGGATCGGCAGGCTCTTCGGCGCGATTCTCTAG

Upstream 100 bases:

>100_bases
TAACGCGCCCGTTGCGCCCCCGCAGAGAATCGCATTCAGACGACAGGATTGTCGGACTCGTCGATGAGCCTCGATCCCGC
ATCCGTTCCGGAGTCGCTTC

Downstream 100 bases:

>100_bases
ATCGCCGGCAAGCCCTCTGCCGTCGATCCCGCACCTTTCGCGTTCGGCGAAAGCAGGCCGCCATTCGACGCTACTCCCTC
CGCTTCTGCCCCTCGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Nodulin-Like Protein-Like Protein; Transmembrane Protein; Ypothetical Protein SMU.; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF; Nodulin-

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MIRPVRPKEIHLVNRIGWLRAAVLGANDGIISTASLIVGVAAATPNRDEVLVAGIAGLVAGAMSMAAGEYVSVSSQSDTE
NADLRREARELRDDPGGELDELAEIYVKRGVDPMLARQVAAQMMKSDALGAHARDELGITQTTTARPVQAALTSALTFTV
GAAMPLSMVIIAPANLLIQLTSAASLGFLAVLGAVGAKAGGAGILRATTRVTFWGALALGITAGIGRLFGAIL

Sequences:

>Translated_233_residues
MIRPVRPKEIHLVNRIGWLRAAVLGANDGIISTASLIVGVAAATPNRDEVLVAGIAGLVAGAMSMAAGEYVSVSSQSDTE
NADLRREARELRDDPGGELDELAEIYVKRGVDPMLARQVAAQMMKSDALGAHARDELGITQTTTARPVQAALTSALTFTV
GAAMPLSMVIIAPANLLIQLTSAASLGFLAVLGAVGAKAGGAGILRATTRVTFWGALALGITAGIGRLFGAIL
>Mature_233_residues
MIRPVRPKEIHLVNRIGWLRAAVLGANDGIISTASLIVGVAAATPNRDEVLVAGIAGLVAGAMSMAAGEYVSVSSQSDTE
NADLRREARELRDDPGGELDELAEIYVKRGVDPMLARQVAAQMMKSDALGAHARDELGITQTTTARPVQAALTSALTFTV
GAAMPLSMVIIAPANLLIQLTSAASLGFLAVLGAVGAKAGGAGILRATTRVTFWGALALGITAGIGRLFGAIL

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23922; Mature: 23922

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPVRPKEIHLVNRIGWLRAAVLGANDGIISTASLIVGVAAATPNRDEVLVAGIAGLVA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GAMSMAAGEYVSVSSQSDTENADLRREARELRDDPGGELDELAEIYVKRGVDPMLARQVA
HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
AQMMKSDALGAHARDELGITQTTTARPVQAALTSALTFTVGAAMPLSMVIIAPANLLIQL
HHHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHEEEE
TSAASLGFLAVLGAVGAKAGGAGILRATTRVTFWGALALGITAGIGRLFGAIL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRPVRPKEIHLVNRIGWLRAAVLGANDGIISTASLIVGVAAATPNRDEVLVAGIAGLVA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GAMSMAAGEYVSVSSQSDTENADLRREARELRDDPGGELDELAEIYVKRGVDPMLARQVA
HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
AQMMKSDALGAHARDELGITQTTTARPVQAALTSALTFTVGAAMPLSMVIIAPANLLIQL
HHHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHEEEE
TSAASLGFLAVLGAVGAKAGGAGILRATTRVTFWGALALGITAGIGRLFGAIL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA