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The map label for this gene is amaB [H]

Identifier: 86750733

GI number: 86750733

Start: 4158364

End: 4159611

Strand: Direct

Name: amaB [H]

Synonym: RPB_3623

Alternate gene names: 86750733

Gene position: 4158364-4159611 (Clockwise)

Preceding gene: 86750732

Following gene: 86750734

Centisome position: 77.99

GC content: 67.15

Gene sequence:

>1248_bases
ATGACCAAGCCTGCCTCGAACCTGCAGATCGATTCGTCGCGGCTGTGGGACACCATCCACACCACCGCGCAATTCGGCGC
CACGCCGAAAGGCGGCGTGAGACGGCTGACGCTCGGGCCGGAGGACAAGCAGGTCCGCGACTGGTTCCGAGCCGCCTGCG
AAAACGCCGGCCTCGACGTCCAGGTCGACGGGCTCGGCAACATGTTCGCGTTGCGCCGCGGCCGCGACATGTCGAAGCCG
CCGCTCGGGCTCGGCTCGCATCTCGACACCCAGCCGACCGGCGGCAAGTTCGACGGCATCCTCGGCACACTCGCCGCACT
CGAAGTGATCCGCACCCTGAACGACGCCGGCATCGAAACCGAGCTGCCGCTCTGCGTCACGAACTGGACCAACGAAGAAG
GCTCGCGCTACGCGCCGGCGATGATGGGATCGGCCGCCTTCGTCGGCGATTTCACGGTCGACGACATTCTCGGGCGCAAG
GACGCCGCCGGCATCAGCGTCGCCGAGGCGCTCGACAGCATCGGCTATCGCGGTGATCTGCCGGTCGGCGCGCAGCCGTT
CAGCGGCTTCCTCGAACTGCACATCGAACAGGGGCCGATCCTCGAAGCCGAAGGCAAGACCATCGGCGTCGTCGAAAACG
GTCAGGGCGTGCTGTGGTACGACGGCAGGATCACCGGCTTCGAAAGCCATGCCGGATCGACGCCGATGAATCTTCGCCGC
GACGCGCTGGCGACGCTGTCGGAAATCGTGCTGGCGATCGAAGCCATCGCGGTCGAACTCGGCAATGCAGTCGGCACCGT
CGGCGAAGCCGTGATCGCCTCACCCTCGCGCAACGTCATCCCCGGCGAGATCGCTTTCACCATCGACGCGCGTAGCGCCG
ACGCGGCGATCCTCGCGCAACTCGACGAGCGCATCCGCGCCGCGGCGGCCGGGATCGCGGCGAAGCGCAAGGTCGAGGTC
ACACTCGATCTGGTCTGGCGCAAGGAGCCGACGCATTTCGACAAGACGCTGGTCGGCGCGGTCGAGAGCGCAGCGAACGC
GCTCGGCTATGCCAATCGCCGCATCACCTCGGGCGCCGGCCACGACGCCTGCAATCTCAACGCCAAGGTGCCGACGGCGA
TGATTTTCGTGCCGTGCAAGGACGGCGTCAGCCACAACGAGCTCGAGGACGCTACGCAGACCGACTGCGCCTCCGGCGCC
AATGTGCTGCTGCACACGGTGCTGTCGCTCGCGGGCGTCGCGAAGTAA

Upstream 100 bases:

>100_bases
CATTCTGCCCGCCGAAGAGCCAGTGGCAGGTTGACGCGCGCCGCGCGGCGTTGAAATCTTCACCCTTCCTCGCGCCGTCG
GCGCTTCGTCCGGAGATCGC

Downstream 100 bases:

>100_bases
CAGTAAAACAAAACCGGGGGACCAGGATGCACGCGGTGTTCGTCGACGCCAGCGAAACGCTGGCGATGATCATGGAAGCT
CAGGCCCTGCCGGACGATCC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTKPASNLQIDSSRLWDTIHTTAQFGATPKGGVRRLTLGPEDKQVRDWFRAACENAGLDVQVDGLGNMFALRRGRDMSKP
PLGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIETELPLCVTNWTNEEGSRYAPAMMGSAAFVGDFTVDDILGRK
DAAGISVAEALDSIGYRGDLPVGAQPFSGFLELHIEQGPILEAEGKTIGVVENGQGVLWYDGRITGFESHAGSTPMNLRR
DALATLSEIVLAIEAIAVELGNAVGTVGEAVIASPSRNVIPGEIAFTIDARSADAAILAQLDERIRAAAAGIAAKRKVEV
TLDLVWRKEPTHFDKTLVGAVESAANALGYANRRITSGAGHDACNLNAKVPTAMIFVPCKDGVSHNELEDATQTDCASGA
NVLLHTVLSLAGVAK

Sequences:

>Translated_415_residues
MTKPASNLQIDSSRLWDTIHTTAQFGATPKGGVRRLTLGPEDKQVRDWFRAACENAGLDVQVDGLGNMFALRRGRDMSKP
PLGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIETELPLCVTNWTNEEGSRYAPAMMGSAAFVGDFTVDDILGRK
DAAGISVAEALDSIGYRGDLPVGAQPFSGFLELHIEQGPILEAEGKTIGVVENGQGVLWYDGRITGFESHAGSTPMNLRR
DALATLSEIVLAIEAIAVELGNAVGTVGEAVIASPSRNVIPGEIAFTIDARSADAAILAQLDERIRAAAAGIAAKRKVEV
TLDLVWRKEPTHFDKTLVGAVESAANALGYANRRITSGAGHDACNLNAKVPTAMIFVPCKDGVSHNELEDATQTDCASGA
NVLLHTVLSLAGVAK
>Mature_414_residues
TKPASNLQIDSSRLWDTIHTTAQFGATPKGGVRRLTLGPEDKQVRDWFRAACENAGLDVQVDGLGNMFALRRGRDMSKPP
LGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIETELPLCVTNWTNEEGSRYAPAMMGSAAFVGDFTVDDILGRKD
AAGISVAEALDSIGYRGDLPVGAQPFSGFLELHIEQGPILEAEGKTIGVVENGQGVLWYDGRITGFESHAGSTPMNLRRD
ALATLSEIVLAIEAIAVELGNAVGTVGEAVIASPSRNVIPGEIAFTIDARSADAAILAQLDERIRAAAAGIAAKRKVEVT
LDLVWRKEPTHFDKTLVGAVESAANALGYANRRITSGAGHDACNLNAKVPTAMIFVPCKDGVSHNELEDATQTDCASGAN
VLLHTVLSLAGVAK

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=403, Percent_Identity=33.7468982630273, Blast_Score=206, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 43675; Mature: 43544

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPASNLQIDSSRLWDTIHTTAQFGATPKGGVRRLTLGPEDKQVRDWFRAACENAGLDV
CCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEE
QVDGLGNMFALRRGRDMSKPPLGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIET
EECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ELPLCVTNWTNEEGSRYAPAMMGSAAFVGDFTVDDILGRKDAAGISVAEALDSIGYRGDL
CCCEEEECCCCCCCCEECHHHHCCCEEECCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCC
PVGAQPFSGFLELHIEQGPILEAEGKTIGVVENGQGVLWYDGRITGFESHAGSTPMNLRR
CCCCCCCCCEEEEEECCCCEEEECCCEEEEEECCCEEEEECCEEECCCCCCCCCCCHHHH
DALATLSEIVLAIEAIAVELGNAVGTVGEAVIASPSRNVIPGEIAFTIDARSADAAILAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHHHH
LDERIRAAAAGIAAKRKVEVTLDLVWRKEPTHFDKTLVGAVESAANALGYANRRITSGAG
HHHHHHHHHHHHHHCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCC
HDACNLNAKVPTAMIFVPCKDGVSHNELEDATQTDCASGANVLLHTVLSLAGVAK
CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKPASNLQIDSSRLWDTIHTTAQFGATPKGGVRRLTLGPEDKQVRDWFRAACENAGLDV
CCCCCCCEECHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEE
QVDGLGNMFALRRGRDMSKPPLGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIET
EECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ELPLCVTNWTNEEGSRYAPAMMGSAAFVGDFTVDDILGRKDAAGISVAEALDSIGYRGDL
CCCEEEECCCCCCCCEECHHHHCCCEEECCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCC
PVGAQPFSGFLELHIEQGPILEAEGKTIGVVENGQGVLWYDGRITGFESHAGSTPMNLRR
CCCCCCCCCEEEEEECCCCEEEECCCEEEEEECCCEEEEECCEEECCCCCCCCCCCHHHH
DALATLSEIVLAIEAIAVELGNAVGTVGEAVIASPSRNVIPGEIAFTIDARSADAAILAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHHHH
LDERIRAAAAGIAAKRKVEVTLDLVWRKEPTHFDKTLVGAVESAANALGYANRRITSGAG
HHHHHHHHHHHHHHCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCC
HDACNLNAKVPTAMIFVPCKDGVSHNELEDATQTDCASGANVLLHTVLSLAGVAK
CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]