| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is paaG [H]
Identifier: 86750715
GI number: 86750715
Start: 4137171
End: 4137971
Strand: Reverse
Name: paaG [H]
Synonym: RPB_3605
Alternate gene names: 86750715
Gene position: 4137971-4137171 (Counterclockwise)
Preceding gene: 86750718
Following gene: 86750714
Centisome position: 77.61
GC content: 64.79
Gene sequence:
>801_bases ATGCAGTTCAAACACGTCACGCTCGATTTCGACGGCCCGGTCGCGGTCCTCAAGCTCGATCATCCGGAAGTGATGAATGC GGTCTCGATCGACATGCTGGGCGGCCTCGGCGAGGCGCTCGACGCGATCGAGGACAAGCGCGCCGAAGTGCGCTGCCTGG TCATCACCGGCGCGGGCCGCGCGTTCTGCACCGGCGCCAATCTGCAGGGCCGCAATTCCGGCAACAACATGAGCCAGAGC GGCAAGGGCGCCGGCGCCGCGCTCGAGACCGCCTTTCATCCGTTCCTGCGCCGCTTGCGCAAGCTGCATTGCCCGATCGT CACTTCGGTCAACGGGCCTGCCGCGGGCGCCGGCATGAGCTTCGCGCTGATGGGCGACATGATCCTGTGCGCGCGTTCGT CCTACTTCCTGCAGGCGTTCCGCCGCATCGGCCTAGTGCCGGATTGCGGCTCGACGTGGTTGCTGCCGCGCCTGGTCGGC AAGGCGCGCTCGCTCGAATTGTCGCTGCTCGGCGAGAAGCTGCCGGCCGAGAAGGCGCTGGAATGGGGCCTCGTCAATCG CGTCTACGACGACGCCGAGCTGTGGACCGAAACGATGAAGCTTGCGCAGGAACTCGCCAACGGCCCGACCATAGCGCTGT CGCTGATCCGCAAGCTGTATTGGGACTCGCCGGAAAATTCGTTCGAGGAGCAGCTCAACCTCGAATTCGAATCCCAGCGC ATCGCAGGCTCGACCGACGACTTCAAGGAAGGCGTCGGCGCGTTTCTCGAAAAGCGCCCCGCGAAGTTCCAGGGCAAATA A
Upstream 100 bases:
>100_bases CGGCGGACCATGGACAAGCGCGCTGCAAAAATCAAATATGGCTCCGGGTTCGCGAGCCTTCCACGCCGCGGAATAACGCG GAGCAAGCGCGAGGAAACAG
Downstream 100 bases:
>100_bases GCGCGCGATGGCCGCAACGGCTTTTGTCGAGGCGCTGGCGCGCAGCGTGCGATCGTGGTGCGCCGGCGCGACCGGCGTCC GCGACGTCGCGCAACTCTCC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MQFKHVTLDFDGPVAVLKLDHPEVMNAVSIDMLGGLGEALDAIEDKRAEVRCLVITGAGRAFCTGANLQGRNSGNNMSQS GKGAGAALETAFHPFLRRLRKLHCPIVTSVNGPAAGAGMSFALMGDMILCARSSYFLQAFRRIGLVPDCGSTWLLPRLVG KARSLELSLLGEKLPAEKALEWGLVNRVYDDAELWTETMKLAQELANGPTIALSLIRKLYWDSPENSFEEQLNLEFESQR IAGSTDDFKEGVGAFLEKRPAKFQGK
Sequences:
>Translated_266_residues MQFKHVTLDFDGPVAVLKLDHPEVMNAVSIDMLGGLGEALDAIEDKRAEVRCLVITGAGRAFCTGANLQGRNSGNNMSQS GKGAGAALETAFHPFLRRLRKLHCPIVTSVNGPAAGAGMSFALMGDMILCARSSYFLQAFRRIGLVPDCGSTWLLPRLVG KARSLELSLLGEKLPAEKALEWGLVNRVYDDAELWTETMKLAQELANGPTIALSLIRKLYWDSPENSFEEQLNLEFESQR IAGSTDDFKEGVGAFLEKRPAKFQGK >Mature_266_residues MQFKHVTLDFDGPVAVLKLDHPEVMNAVSIDMLGGLGEALDAIEDKRAEVRCLVITGAGRAFCTGANLQGRNSGNNMSQS GKGAGAALETAFHPFLRRLRKLHCPIVTSVNGPAAGAGMSFALMGDMILCARSSYFLQAFRRIGLVPDCGSTWLLPRLVG KARSLELSLLGEKLPAEKALEWGLVNRVYDDAELWTETMKLAQELANGPTIALSLIRKLYWDSPENSFEEQLNLEFESQR IAGSTDDFKEGVGAFLEKRPAKFQGK
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=254, Percent_Identity=29.5275590551181, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI31542718, Length=243, Percent_Identity=25.5144032921811, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI116235487, Length=192, Percent_Identity=27.0833333333333, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI4757968, Length=243, Percent_Identity=25.5144032921811, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI49355787, Length=243, Percent_Identity=25.5144032921811, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI4757966, Length=199, Percent_Identity=27.1356783919598, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI51538581, Length=199, Percent_Identity=27.1356783919598, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI25453481, Length=245, Percent_Identity=26.1224489795918, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI51538573, Length=245, Percent_Identity=26.1224489795918, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI70995211, Length=256, Percent_Identity=25.390625, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI45643119, Length=222, Percent_Identity=23.4234234234234, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI260275230, Length=222, Percent_Identity=23.4234234234234, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI260274832, Length=222, Percent_Identity=23.4234234234234, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI221136756, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI221136753, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI221307494, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1787660, Length=253, Percent_Identity=44.2687747035573, Blast_Score=197, Evalue=5e-52, Organism=Escherichia coli, GI221142681, Length=262, Percent_Identity=30.9160305343511, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787659, Length=253, Percent_Identity=30.4347826086957, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87082183, Length=273, Percent_Identity=24.5421245421245, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788597, Length=261, Percent_Identity=26.0536398467433, Blast_Score=78, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=28.4584980237154, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25145438, Length=255, Percent_Identity=30.9803921568627, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17560910, Length=252, Percent_Identity=26.984126984127, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17540306, Length=243, Percent_Identity=26.7489711934156, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17535521, Length=250, Percent_Identity=24.4, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17534483, Length=256, Percent_Identity=23.828125, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17536985, Length=228, Percent_Identity=24.1228070175439, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558304, Length=216, Percent_Identity=27.3148148148148, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI20129971, Length=250, Percent_Identity=31.2, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24653477, Length=250, Percent_Identity=31.2, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24654903, Length=220, Percent_Identity=26.3636363636364, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI19922422, Length=250, Percent_Identity=24.8, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI19920382, Length=250, Percent_Identity=26, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24653139, Length=266, Percent_Identity=27.4436090225564, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI21357171, Length=257, Percent_Identity=25.6809338521401, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 29002; Mature: 29002
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFKHVTLDFDGPVAVLKLDHPEVMNAVSIDMLGGLGEALDAIEDKRAEVRCLVITGAGR CCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEECCCC AFCTGANLQGRNSGNNMSQSGKGAGAALETAFHPFLRRLRKLHCPIVTSVNGPAAGAGMS EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCH FALMGDMILCARSSYFLQAFRRIGLVPDCGSTWLLPRLVGKARSLELSLLGEKLPAEKAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHCCHHHHHCCCCCHHHHH EWGLVNRVYDDAELWTETMKLAQELANGPTIALSLIRKLYWDSPENSFEEQLNLEFESQR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHH IAGSTDDFKEGVGAFLEKRPAKFQGK CCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQFKHVTLDFDGPVAVLKLDHPEVMNAVSIDMLGGLGEALDAIEDKRAEVRCLVITGAGR CCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEECCCC AFCTGANLQGRNSGNNMSQSGKGAGAALETAFHPFLRRLRKLHCPIVTSVNGPAAGAGMS EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCH FALMGDMILCARSSYFLQAFRRIGLVPDCGSTWLLPRLVGKARSLELSLLGEKLPAEKAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHCCHHHHHCCCCCHHHHH EWGLVNRVYDDAELWTETMKLAQELANGPTIALSLIRKLYWDSPENSFEEQLNLEFESQR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHH IAGSTDDFKEGVGAFLEKRPAKFQGK CCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]