| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750714
Identifier: 86750714
GI number: 86750714
Start: 4136168
End: 4137163
Strand: Reverse
Name: 86750714
Synonym: RPB_3604
Alternate gene names: NA
Gene position: 4137163-4136168 (Counterclockwise)
Preceding gene: 86750715
Following gene: 86750713
Centisome position: 77.6
GC content: 68.47
Gene sequence:
>996_bases ATGGCCGCAACGGCTTTTGTCGAGGCGCTGGCGCGCAGCGTGCGATCGTGGTGCGCCGGCGCGACCGGCGTCCGCGACGT CGCGCAACTCTCCGGCGGCGCCAGCCAGGAGACCTGGTCGTTCGTGATCGAGCGGCCGGACGGCGACATCGCGGCGATCC TGCGCCGCTCGCCGCCGGGCTATGGCAGCGTTTCCGGACGCGCCGCGGGGCTGGAGGTCGAAGCCGAATTGATGCGGCTC GCTGACGAGGCCGGGGTGCCGTCGCCGCGCGTGCTGCACGTTCTCACCGAGCGTGACGGGCTCGGCGACGGTTTTTTGAT GCAGAAGGTGGAGGGCGAAACCATCCCGCGCAAGATCCTGCGCGACGAACTATTCGCCGCCGCACGGCCGAAACTGGCGC GGCAGATCGGCACCATCCTCGCCGGCCTGCACGGCATCGACAGCGCCGCGCTGCCGGGCTTGCGGACGATCAGTTCGACG CAGGAGATCGAGCTGCTGCGCGCCGACTATCGCAGCATGGATTGGCCGCGGCCGGTGTTCGAACTGGCGCTGCGCTGGCT CGCCGATCACGACCCCGGCGTCTCCAAGCAGATCACGCTGGTGCACGGCGATTTCCGCCACGGCAATCTGATCATCGGGC CCGACGGCGTGCGCGCCGTGCTCGATTGGGAACTCGCGCATCGCGGCGACCCGATGGAAGACCTCGGCTGGGTCTGCGTC AATTCGTGGCGGTTCGGCGAGATCGACAGACCGGTCGGCGGGCTCGGCTCGCGCGAGGAGATGTTCGCGGGCTATCAGGA CGCCGGCGGAACCGTCGATGCCGATCGGGTCAAATTCTGGGAAGTAATGGGCACGTTGCGCTGGGGCATCATGTGCTGCG GCATGATGCAGCGGTTTCGGCAGGGTCCCGACCACTCGATGGAACGCGCGATGATCGGGCGCCGCTCGTCGGAAACCGAG ATCGATCTGCTGCGGTTATTGGCGCCGCGCGCCTAG
Upstream 100 bases:
>100_bases GAATCCCAGCGCATCGCAGGCTCGACCGACGACTTCAAGGAAGGCGTCGGCGCGTTTCTCGAAAAGCGCCCCGCGAAGTT CCAGGGCAAATAAGCGCGCG
Downstream 100 bases:
>100_bases ATAACGAAGGGGCGAAGCCGAGATGCAGGACGAACCGAGGCCCGACGAACTGATCAAGGCGGTGGCCGATTTCCTGCGCG AGCAGGTCGCGCCGCAGCTC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase Family Protein; Phosphotransferase Family Protein; Phosphotransferase; Phosphotransferase Family; Acyl-CoA Dehydrogenase; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Tyrosine Protein KinaseAminoglycoside Phosphotransferase; Aminoglycoside Phosphotransferase-Like Protein; Acyl-CoA Dehydrogenase Family Member; FadE36 Aminoglycoside Phosphotransferase
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MAATAFVEALARSVRSWCAGATGVRDVAQLSGGASQETWSFVIERPDGDIAAILRRSPPGYGSVSGRAAGLEVEAELMRL ADEAGVPSPRVLHVLTERDGLGDGFLMQKVEGETIPRKILRDELFAAARPKLARQIGTILAGLHGIDSAALPGLRTISST QEIELLRADYRSMDWPRPVFELALRWLADHDPGVSKQITLVHGDFRHGNLIIGPDGVRAVLDWELAHRGDPMEDLGWVCV NSWRFGEIDRPVGGLGSREEMFAGYQDAGGTVDADRVKFWEVMGTLRWGIMCCGMMQRFRQGPDHSMERAMIGRRSSETE IDLLRLLAPRA
Sequences:
>Translated_331_residues MAATAFVEALARSVRSWCAGATGVRDVAQLSGGASQETWSFVIERPDGDIAAILRRSPPGYGSVSGRAAGLEVEAELMRL ADEAGVPSPRVLHVLTERDGLGDGFLMQKVEGETIPRKILRDELFAAARPKLARQIGTILAGLHGIDSAALPGLRTISST QEIELLRADYRSMDWPRPVFELALRWLADHDPGVSKQITLVHGDFRHGNLIIGPDGVRAVLDWELAHRGDPMEDLGWVCV NSWRFGEIDRPVGGLGSREEMFAGYQDAGGTVDADRVKFWEVMGTLRWGIMCCGMMQRFRQGPDHSMERAMIGRRSSETE IDLLRLLAPRA >Mature_330_residues AATAFVEALARSVRSWCAGATGVRDVAQLSGGASQETWSFVIERPDGDIAAILRRSPPGYGSVSGRAAGLEVEAELMRLA DEAGVPSPRVLHVLTERDGLGDGFLMQKVEGETIPRKILRDELFAAARPKLARQIGTILAGLHGIDSAALPGLRTISSTQ EIELLRADYRSMDWPRPVFELALRWLADHDPGVSKQITLVHGDFRHGNLIIGPDGVRAVLDWELAHRGDPMEDLGWVCVN SWRFGEIDRPVGGLGSREEMFAGYQDAGGTVDADRVKFWEVMGTLRWGIMCCGMMQRFRQGPDHSMERAMIGRRSSETEI DLLRLLAPRA
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=315, Percent_Identity=26.6666666666667, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI211971008, Length=315, Percent_Identity=26.6666666666667, Blast_Score=97, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36340; Mature: 36209
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATAFVEALARSVRSWCAGATGVRDVAQLSGGASQETWSFVIERPDGDIAAILRRSPPG CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCCC YGSVSGRAAGLEVEAELMRLADEAGVPSPRVLHVLTERDGLGDGFLMQKVEGETIPRKIL CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHHHH RDELFAAARPKLARQIGTILAGLHGIDSAALPGLRTISSTQEIELLRADYRSMDWPRPVF HHHHHHHHCHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCHHH ELALRWLADHDPGVSKQITLVHGDFRHGNLIIGPDGVRAVLDWELAHRGDPMEDLGWVCV HHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCCEEHEEHHHHHCCCCHHHHHHEEE NSWRFGEIDRPVGGLGSREEMFAGYQDAGGTVDADRVKFWEVMGTLRWGIMCCGMMQRFR CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QGPDHSMERAMIGRRSSETEIDLLRLLAPRA CCCCHHHHHHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure AATAFVEALARSVRSWCAGATGVRDVAQLSGGASQETWSFVIERPDGDIAAILRRSPPG CHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCCC YGSVSGRAAGLEVEAELMRLADEAGVPSPRVLHVLTERDGLGDGFLMQKVEGETIPRKIL CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHHHH RDELFAAARPKLARQIGTILAGLHGIDSAALPGLRTISSTQEIELLRADYRSMDWPRPVF HHHHHHHHCHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCHHH ELALRWLADHDPGVSKQITLVHGDFRHGNLIIGPDGVRAVLDWELAHRGDPMEDLGWVCV HHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCCEEHEEHHHHHCCCCHHHHHHEEE NSWRFGEIDRPVGGLGSREEMFAGYQDAGGTVDADRVKFWEVMGTLRWGIMCCGMMQRFR CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QGPDHSMERAMIGRRSSETEIDLLRLLAPRA CCCCHHHHHHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA