Click here to switch to the map view.

The map label for this gene is 86750689

Identifier: 86750689

GI number: 86750689

Start: 4103837

End: 4104298

Strand: Reverse

Name: 86750689

Synonym: RPB_3579

Alternate gene names: NA

Gene position: 4104298-4103837 (Counterclockwise)

Preceding gene: 86750690

Following gene: 86750688

Centisome position: 76.98

GC content: 65.58

Gene sequence:

>462_bases
ATGAAACCCGTGCTCGAGACCCGTTACGTCTTCACCATCACCGCGAGGATCGGCGAGGTGATCTCCGCCGGCGACACCGG
CGCCGGCGTGCGCCGGGTGATTCCGGTGATCGGCGGCGAGGTCAAAGGCGAGGGCATCAGCGGCCGCGTGCTGGCGTCGG
GCGCCGATTTCCAGATCATCCGGCCGAACGAACTGATCGAGCTCGAGGCCAAATACGCGTTCGAGACCGACGACGGCGCG
GTGATCTATGTCGAGAATGTCGGCATCCGGTTCGGGCCGGTCGAGCTGTTGCAGAAGCTGAAGCGCGGCGAGCCGGTCGA
CCCGAAGCTGATCTATTTCCGCACCCGGCCGCGGTTCGAGACCGGCCATCCGAACTACCAATGGCTGACCACGCATCTGT
TCATCGGCTCCGCCGCCCGCCACGCCGACCGCGTCGTGATCGACGTGCATCAGGTGCTGTGA

Upstream 100 bases:

>100_bases
GTGGCGCCGTTCGTGGTCACCGACGTGATCCGGCTGGTGATCCTGATCCTGTTCCCGATCCTGGCGACCTGGCTGCCGCA
ACGCATGGTAGGATGACGCA

Downstream 100 bases:

>100_bases
AGCGCGACCTCGCCGGCCTCTCAACACGTTCGCCGTCATCCTGAGGTGCGAGGGCAGCCAGAGCGGCAACCTCGCCGCAT
TCGCGGCCGCCCGAGCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKPVLETRYVFTITARIGEVISAGDTGAGVRRVIPVIGGEVKGEGISGRVLASGADFQIIRPNELIELEAKYAFETDDGA
VIYVENVGIRFGPVELLQKLKRGEPVDPKLIYFRTRPRFETGHPNYQWLTTHLFIGSAARHADRVVIDVHQVL

Sequences:

>Translated_153_residues
MKPVLETRYVFTITARIGEVISAGDTGAGVRRVIPVIGGEVKGEGISGRVLASGADFQIIRPNELIELEAKYAFETDDGA
VIYVENVGIRFGPVELLQKLKRGEPVDPKLIYFRTRPRFETGHPNYQWLTTHLFIGSAARHADRVVIDVHQVL
>Mature_153_residues
MKPVLETRYVFTITARIGEVISAGDTGAGVRRVIPVIGGEVKGEGISGRVLASGADFQIIRPNELIELEAKYAFETDDGA
VIYVENVGIRFGPVELLQKLKRGEPVDPKLIYFRTRPRFETGHPNYQWLTTHLFIGSAARHADRVVIDVHQVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0311 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR020915 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16984; Mature: 16984

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVLETRYVFTITARIGEVISAGDTGAGVRRVIPVIGGEVKGEGISGRVLASGADFQII
CCCCCCCEEEEEEEEHHHHHHCCCCCCCCHHHHHHHCCCEEECCCCCCEEEECCCCEEEE
RPNELIELEAKYAFETDDGAVIYVENVGIRFGPVELLQKLKRGEPVDPKLIYFRTRPRFE
CCCCEEEEEEEEEEECCCCCEEEEECCCCEECHHHHHHHHHCCCCCCCEEEEEECCCCCC
TGHPNYQWLTTHLFIGSAARHADRVVIDVHQVL
CCCCCCEEEEEEEEECCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MKPVLETRYVFTITARIGEVISAGDTGAGVRRVIPVIGGEVKGEGISGRVLASGADFQII
CCCCCCCEEEEEEEEHHHHHHCCCCCCCCHHHHHHHCCCEEECCCCCCEEEECCCCEEEE
RPNELIELEAKYAFETDDGAVIYVENVGIRFGPVELLQKLKRGEPVDPKLIYFRTRPRFE
CCCCEEEEEEEEEEECCCCCEEEEECCCCEECHHHHHHHHHCCCCCCCEEEEEECCCCCC
TGHPNYQWLTTHLFIGSAARHADRVVIDVHQVL
CCCCCCEEEEEEEEECCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA