| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ilvC [H]
Identifier: 86750452
GI number: 86750452
Start: 3822249
End: 3823268
Strand: Reverse
Name: ilvC [H]
Synonym: RPB_3341
Alternate gene names: 86750452
Gene position: 3823268-3822249 (Counterclockwise)
Preceding gene: 86750453
Following gene: 86750451
Centisome position: 71.71
GC content: 63.53
Gene sequence:
>1020_bases ATGCGAGTTTACTACGATCGCGACGCCGACCTGAATCTGATCAAGGGCAAGAAGGTCGTCATCGTCGGCTACGGCAGCCA GGGCCACGCCCACGCGCTGAACCTCAAGGATTCCGGCGTCAAGGACGTCGCGATCGCGCTGCGCAAGGGCTCGGCCACGG CCAAGAAGGCCGAAGCCGCCGGCTTCAAGGTGATGGAAGTCGCCGAGGCCGCCAAATGGGCCGACGTGATGATGATGCTG ACGCCCGACGAATTGCAGGGCGAGATCTATCGCGACCACCTGCACGACAACATGAAGCAGGGCGCGGCGCTGCTGTTTGC GCACGGCCTCAACGTCCACTTCAACCTGATCGAGCCGCGCGCCGATCTCGACGTGCTGATGGTCGCGCCGAAGGGCCCGG GCCACACCGTGCGTTCGGAATATCAGCGCGGCGGCGGCGTGCCGAGCCTGATCGCGATCCACCAGGATCCGTCGGGCAAT GCTCACGACCTCGGCCTCAGCTACGCCTCGGCGATCGGCGGCGGCCGCGCCGGCATCATCGAGACCTCGTTCAAGGAAGA ATGCGAGACCGATCTGTTCGGCGAGCAGGTGGTGCTGTGCGGCGGTCTGGTCGAACTGATCAAGGCCGGCTTCGAGACGC TGGTGGAAGCCGGCTACGCGCCGGAGATGGCGTATTTCGAGTGCCTGCACGAAGTGAAGCTGATCGTCGACCTGATCTAT GAAGGCGGCATCGCCAACATGAACTACTCGATCTCCAACACCGCGGAATACGGCGAATACGTCACCGGCCCGCGCATCGT CACCGCCGAGACCAAGGCGGAGATGAAGCGGGTGCTGGCCGACATCCAGAACGGCATCTTCACCCGCAACTGGATGCTCG AGAACAAGGTCAACCAGACCTCGTTCAAGGCCACCCGCGCCAAGCTCGCCGCCCACCCGATCGAGGAAGTCGGCGCCAAG CTCCGCGACATGATGCCCTGGATCAAGAAGGGCGCGCTCGTGGACAAGAGCAAGAACTAA
Upstream 100 bases:
>100_bases ACCTCCCGCCCTAGAAACCGGCAGCAATTTCACGGTCGGCCGGGACTGGCCCGATCACCACAGCAGGGGGCGGGACGGGC CGCCGAAGAGAGGAACGAGA
Downstream 100 bases:
>100_bases GCGCGCGACGCGCTCGGCGTCATCCTGAGGCGCCGCCGCAAAGCGGCGGCCTCGAAGGATGGACCGCTTGCACTCGCCGC CGCATCCTTCGAGGCTCGCC
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRVYYDRDADLNLIKGKKVVIVGYGSQGHAHALNLKDSGVKDVAIALRKGSATAKKAEAAGFKVMEVAEAAKWADVMMML TPDELQGEIYRDHLHDNMKQGAALLFAHGLNVHFNLIEPRADLDVLMVAPKGPGHTVRSEYQRGGGVPSLIAIHQDPSGN AHDLGLSYASAIGGGRAGIIETSFKEECETDLFGEQVVLCGGLVELIKAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEYGEYVTGPRIVTAETKAEMKRVLADIQNGIFTRNWMLENKVNQTSFKATRAKLAAHPIEEVGAK LRDMMPWIKKGALVDKSKN
Sequences:
>Translated_339_residues MRVYYDRDADLNLIKGKKVVIVGYGSQGHAHALNLKDSGVKDVAIALRKGSATAKKAEAAGFKVMEVAEAAKWADVMMML TPDELQGEIYRDHLHDNMKQGAALLFAHGLNVHFNLIEPRADLDVLMVAPKGPGHTVRSEYQRGGGVPSLIAIHQDPSGN AHDLGLSYASAIGGGRAGIIETSFKEECETDLFGEQVVLCGGLVELIKAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEYGEYVTGPRIVTAETKAEMKRVLADIQNGIFTRNWMLENKVNQTSFKATRAKLAAHPIEEVGAK LRDMMPWIKKGALVDKSKN >Mature_339_residues MRVYYDRDADLNLIKGKKVVIVGYGSQGHAHALNLKDSGVKDVAIALRKGSATAKKAEAAGFKVMEVAEAAKWADVMMML TPDELQGEIYRDHLHDNMKQGAALLFAHGLNVHFNLIEPRADLDVLMVAPKGPGHTVRSEYQRGGGVPSLIAIHQDPSGN AHDLGLSYASAIGGGRAGIIETSFKEECETDLFGEQVVLCGGLVELIKAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEYGEYVTGPRIVTAETKAEMKRVLADIQNGIFTRNWMLENKVNQTSFKATRAKLAAHPIEEVGAK LRDMMPWIKKGALVDKSKN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=289, Percent_Identity=40.4844290657439, Blast_Score=169, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6323387, Length=337, Percent_Identity=31.4540059347181, Blast_Score=125, Evalue=9e-30,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 36977; Mature: 36977
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVYYDRDADLNLIKGKKVVIVGYGSQGHAHALNLKDSGVKDVAIALRKGSATAKKAEAA CEEEECCCCCCEEECCCEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHC GFKVMEVAEAAKWADVMMMLTPDELQGEIYRDHLHDNMKQGAALLFAHGLNVHFNLIEPR CCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEECCC ADLDVLMVAPKGPGHTVRSEYQRGGGVPSLIAIHQDPSGNAHDLGLSYASAIGGGRAGII CCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEE ETSFKEECETDLFGEQVVLCGGLVELIKAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY ECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMNYSISNTAEYGEYVTGPRIVTAETKAEMKRVLADIQNGIFTRNWMLENKVNQT CCCCCCCCCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEECEEECCCCCHH SFKATRAKLAAHPIEEVGAKLRDMMPWIKKGALVDKSKN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRVYYDRDADLNLIKGKKVVIVGYGSQGHAHALNLKDSGVKDVAIALRKGSATAKKAEAA CEEEECCCCCCEEECCCEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHC GFKVMEVAEAAKWADVMMMLTPDELQGEIYRDHLHDNMKQGAALLFAHGLNVHFNLIEPR CCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEECCC ADLDVLMVAPKGPGHTVRSEYQRGGGVPSLIAIHQDPSGNAHDLGLSYASAIGGGRAGII CCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEE ETSFKEECETDLFGEQVVLCGGLVELIKAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY ECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMNYSISNTAEYGEYVTGPRIVTAETKAEMKRVLADIQNGIFTRNWMLENKVNQT CCCCCCCCCCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEECEEECCCCCHH SFKATRAKLAAHPIEEVGAKLRDMMPWIKKGALVDKSKN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]