| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is eamA [H]
Identifier: 86750453
GI number: 86750453
Start: 3823447
End: 3824322
Strand: Reverse
Name: eamA [H]
Synonym: RPB_3342
Alternate gene names: 86750453
Gene position: 3824322-3823447 (Counterclockwise)
Preceding gene: 86750455
Following gene: 86750452
Centisome position: 71.73
GC content: 69.52
Gene sequence:
>876_bases ATGAGGCCAGCCGACATCGCGCTTGCGCTCGTCGTTGCGCTGATCTGGGGGCTGGGCTTCGTGTTCACGCGCTATGCGCT GACCGAGATGTCGCCGACGGTGCTCAATTTGCTGCGGTTCGCCATCACCGCGCTGCCGTGCCTGCTGCTGCCGCGGCCGA AACTCGCCTGGACGATCTGGATCGGCATCAGCCTGCTGCTGGTGTGGCAATATCTCACCCAGAGCTGGGGGATGGCTCAT GGCGTGCCGGCGGGGCTGACCGCGGTGATCGTGCAGAGCCAGGCGCTGTTCACCGTCGCGTTCGCCGCGGTGCTGCTCGG CGAGCGGCCGACCCGGGTGCAACTGATCGGCATCGGCGTCGCCGCGTGCGGCCTGCTGATGATCTGCTTCACCGTCGGCT ACGATTTCACCTTCGTTGCCTTCGCCGTCACCATGACGGCGCCGATCGCCTTCGCCTTCACCAATCTGTTGCTGCGGCAG GCCCGCGACGTGCCGATGCTCGACCTGTTCGCCTGGATCAGCCTGGTGTCGCTGCCGCCGCTGGCGCTCGCCGCCTTCGC CGCCGACGGCGGCCCGGCGATCTGGCGGGAGGTGAGCGGTCTGTCGCCGGGGGTGATGGCGGCGATGCTGTCGCTGTCGA TCGGCTCGACCACGGTCGGCTACTGGATCTGGGGCCGGCTGCTGCAGCGCTACAGCGCCGTCCAGGTGGTGCCGTTCGCG CTGCTGGTGCCGTTCATCGGGGCGGGGGCCTCCAGCCTGGTGTTCGGCGAGACCTTCGGCCCGCTGCGGCTGGCCGGGAT GCTGATCGTGGTGGCGGGGCTCGCCATCATGCTGCTGTTCGGCCGGGCGCGACCGGCGCTGCCGGAGACCGCCTGA
Upstream 100 bases:
>100_bases GGCTGTTCCGCGCGAACGGCGGGTGACGCAGCAGCGCCGGATCGGCTAGGACCCCGGCAACGGCGCGCGCAACGCGCGGC CGATTCAGGGCGGAGACATC
Downstream 100 bases:
>100_bases AAGTCGTAGGCGCCCCGTCTTCGCGGTGCGGCAGCCATGCCGCAGCCACAAAACACCGCCGCGGGCTTGTCTCAGGGCAC CTCCCGCCCTAGAAACCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRPADIALALVVALIWGLGFVFTRYALTEMSPTVLNLLRFAITALPCLLLPRPKLAWTIWIGISLLLVWQYLTQSWGMAH GVPAGLTAVIVQSQALFTVAFAAVLLGERPTRVQLIGIGVAACGLLMICFTVGYDFTFVAFAVTMTAPIAFAFTNLLLRQ ARDVPMLDLFAWISLVSLPPLALAAFAADGGPAIWREVSGLSPGVMAAMLSLSIGSTTVGYWIWGRLLQRYSAVQVVPFA LLVPFIGAGASSLVFGETFGPLRLAGMLIVVAGLAIMLLFGRARPALPETA
Sequences:
>Translated_291_residues MRPADIALALVVALIWGLGFVFTRYALTEMSPTVLNLLRFAITALPCLLLPRPKLAWTIWIGISLLLVWQYLTQSWGMAH GVPAGLTAVIVQSQALFTVAFAAVLLGERPTRVQLIGIGVAACGLLMICFTVGYDFTFVAFAVTMTAPIAFAFTNLLLRQ ARDVPMLDLFAWISLVSLPPLALAAFAADGGPAIWREVSGLSPGVMAAMLSLSIGSTTVGYWIWGRLLQRYSAVQVVPFA LLVPFIGAGASSLVFGETFGPLRLAGMLIVVAGLAIMLLFGRARPALPETA >Mature_291_residues MRPADIALALVVALIWGLGFVFTRYALTEMSPTVLNLLRFAITALPCLLLPRPKLAWTIWIGISLLLVWQYLTQSWGMAH GVPAGLTAVIVQSQALFTVAFAAVLLGERPTRVQLIGIGVAACGLLMICFTVGYDFTFVAFAVTMTAPIAFAFTNLLLRQ ARDVPMLDLFAWISLVSLPPLALAAFAADGGPAIWREVSGLSPGVMAAMLSLSIGSTTVGYWIWGRLLQRYSAVQVVPFA LLVPFIGAGASSLVFGETFGPLRLAGMLIVVAGLAIMLLFGRARPALPETA
Specific function: May be an export pump for several amino acids and their metabolites, including cysteine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=281, Percent_Identity=29.5373665480427, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31051; Mature: 31051
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPADIALALVVALIWGLGFVFTRYALTEMSPTVLNLLRFAITALPCLLLPRPKLAWTIW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IGISLLLVWQYLTQSWGMAHGVPAGLTAVIVQSQALFTVAFAAVLLGERPTRVQLIGIGV HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH AACGLLMICFTVGYDFTFVAFAVTMTAPIAFAFTNLLLRQARDVPMLDLFAWISLVSLPP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH LALAAFAADGGPAIWREVSGLSPGVMAAMLSLSIGSTTVGYWIWGRLLQRYSAVQVVPFA HHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LLVPFIGAGASSLVFGETFGPLRLAGMLIVVAGLAIMLLFGRARPALPETA HHHHHHCCCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRPADIALALVVALIWGLGFVFTRYALTEMSPTVLNLLRFAITALPCLLLPRPKLAWTIW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IGISLLLVWQYLTQSWGMAHGVPAGLTAVIVQSQALFTVAFAAVLLGERPTRVQLIGIGV HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH AACGLLMICFTVGYDFTFVAFAVTMTAPIAFAFTNLLLRQARDVPMLDLFAWISLVSLPP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH LALAAFAADGGPAIWREVSGLSPGVMAAMLSLSIGSTTVGYWIWGRLLQRYSAVQVVPFA HHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LLVPFIGAGASSLVFGETFGPLRLAGMLIVVAGLAIMLLFGRARPALPETA HHHHHHCCCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677609; 9068629 [H]