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The map label for this gene is 86750368

Identifier: 86750368

GI number: 86750368

Start: 3724221

End: 3725717

Strand: Reverse

Name: 86750368

Synonym: RPB_3257

Alternate gene names: NA

Gene position: 3725717-3724221 (Counterclockwise)

Preceding gene: 86750369

Following gene: 86750366

Centisome position: 69.88

GC content: 67.54

Gene sequence:

>1497_bases
ATGGCCTATTCGGGGCGATTCTCCCGTGCTGCGAGCCATGCCGTGACCCTGCAGGCGATCCAATCGTCCGAGACCGCCGC
AGGCAAAGGCGGCGTGCTGCCGCTGCTGGTCGGCTGCGGCGCATTGGTGTACCTGCTTGCGATCGGCGACTCCTTCCTGC
AGGATTCCGACACCTTCTGGCAGATCGAGACCGGACGCTGGATCCTCGCGCACGGCGCGGTGCCGACCACCGACGTGTTT
TCGTTCACCAAGGCGGGTGCGCCATGGATGTCGTCGTCCTGGCTGGCGCAAGTCATCTTCGCGCTCGCGATGAAGGCGGG
CTGGGTCGGTCCGGTGATCGTGACGGCCTTCGCCGCGGCATCGGCCTTTGCGCTGTTCGCTGCGTATCTCGAGCGCTACG
CGTCGGCTTTGGTGACCACGGCACTCACGATGCTCGCGGTGACGCTGACGGTCCCGCATCTGTTGACACGGCCGCACGTC
CTGGCACTACCGTTGATGGTCGGATGGTTCATCGGTCTGATCGACGCGGCCGATCGCAAGGCGGCGCCACGATGGGCGCT
GCTGATCGTCATTGCGCTGTGGGCGAACATTCATGGCGGCTTCGGGCTCGGCCTGCTGCTGATCGCTCCGGCCGCGCTCG
AAGCGCTGCGGCAGGCGGACCCCGCACGGCGCGTGGCGCTGGCCCTGCGTTGGGGCGCATTCGGTGTCGCGGCGCTGGCG
AGTTGCTGCGCCACGCCCTATGGCTGGAACACGCTGATTGCGGCCGGCAAGATCCTCAGCCTCGGCGAGGTGCTGACCAC
CCTGGGCGAATGGGCGCCGGCGGATTTCAGTCGGTTCGGTCCGCTCGAGGCGAGTATCCTGGCGCTGATCGGCGTGGCGC
TGTGGCGAGGTCTGTCGCTGCCGTGGCCGCGGCTGCTGCTGCTGCTCGGGCTGTTGCACATGGCGCTCGCGCATGTTCGC
AGCATCGAGAGCTTCGCCCTCTTGGCACCTCTGGCTCTGGCGCGGCCCTGGGCCGAACAGCTCGCATCCCGGCGCACGCC
GCCGCCGGGCGCGAAAGCCGAGTTCGTGCTGCCGGGCTGGGCCGCGGTCGCTTCTGTGCTGGCGATCGTCGGTGCGACGA
TCGCGGTCGCGCCGCGACTGACCTATCAGTTCGTTGAAACGCAAATGCCCGAGCAAGCGCTGGCCGCGGCGCAACGGAAC
GGCGCCGAGCGTATTCTCAACGGCTACGAGTTCGGCGGTTATCTGATCTCGCGTCGAGTTCCGGTGTTCATCGACGGCCG
CGCCGAATTGTACGGCGAGCGAATGGTGATGGACATGGTTCGCGCGGTTGCGGGCCGCGATACGGCCGCGCTCGATCGCT
TCATCGTGGATTACGACATCGATGCGACGTTGTTGCCGGCGCACGCGCCGATCATCGGCCTGATGGATCGCCGCGCCGGC
TGGCATCGCGCCTATGCCGACGACGTCGCCGTCGTGCATCTGCGCGATCGCCAGTGA

Upstream 100 bases:

>100_bases
CCTGAAGGCCTTCGCGGAGAAGCGCAAGCCGGTTTGGCCGGGGAAGTGACGCGCCGCTCGTTGCGGTCACGGTCCGGTTA
ACCGGACGTTATCGCCGCAT

Downstream 100 bases:

>100_bases
CCGAGCTCAGAGATTGCTTTCGGTGATCGCGCCGTAGACCAGCGCCCGCAGTTCGCGGCGGATCGGATAGCTGCTCGACG
GCAGCAACTGCGTCATGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MAYSGRFSRAASHAVTLQAIQSSETAAGKGGVLPLLVGCGALVYLLAIGDSFLQDSDTFWQIETGRWILAHGAVPTTDVF
SFTKAGAPWMSSSWLAQVIFALAMKAGWVGPVIVTAFAAASAFALFAAYLERYASALVTTALTMLAVTLTVPHLLTRPHV
LALPLMVGWFIGLIDAADRKAAPRWALLIVIALWANIHGGFGLGLLLIAPAALEALRQADPARRVALALRWGAFGVAALA
SCCATPYGWNTLIAAGKILSLGEVLTTLGEWAPADFSRFGPLEASILALIGVALWRGLSLPWPRLLLLLGLLHMALAHVR
SIESFALLAPLALARPWAEQLASRRTPPPGAKAEFVLPGWAAVASVLAIVGATIAVAPRLTYQFVETQMPEQALAAAQRN
GAERILNGYEFGGYLISRRVPVFIDGRAELYGERMVMDMVRAVAGRDTAALDRFIVDYDIDATLLPAHAPIIGLMDRRAG
WHRAYADDVAVVHLRDRQ

Sequences:

>Translated_498_residues
MAYSGRFSRAASHAVTLQAIQSSETAAGKGGVLPLLVGCGALVYLLAIGDSFLQDSDTFWQIETGRWILAHGAVPTTDVF
SFTKAGAPWMSSSWLAQVIFALAMKAGWVGPVIVTAFAAASAFALFAAYLERYASALVTTALTMLAVTLTVPHLLTRPHV
LALPLMVGWFIGLIDAADRKAAPRWALLIVIALWANIHGGFGLGLLLIAPAALEALRQADPARRVALALRWGAFGVAALA
SCCATPYGWNTLIAAGKILSLGEVLTTLGEWAPADFSRFGPLEASILALIGVALWRGLSLPWPRLLLLLGLLHMALAHVR
SIESFALLAPLALARPWAEQLASRRTPPPGAKAEFVLPGWAAVASVLAIVGATIAVAPRLTYQFVETQMPEQALAAAQRN
GAERILNGYEFGGYLISRRVPVFIDGRAELYGERMVMDMVRAVAGRDTAALDRFIVDYDIDATLLPAHAPIIGLMDRRAG
WHRAYADDVAVVHLRDRQ
>Mature_497_residues
AYSGRFSRAASHAVTLQAIQSSETAAGKGGVLPLLVGCGALVYLLAIGDSFLQDSDTFWQIETGRWILAHGAVPTTDVFS
FTKAGAPWMSSSWLAQVIFALAMKAGWVGPVIVTAFAAASAFALFAAYLERYASALVTTALTMLAVTLTVPHLLTRPHVL
ALPLMVGWFIGLIDAADRKAAPRWALLIVIALWANIHGGFGLGLLLIAPAALEALRQADPARRVALALRWGAFGVAALAS
CCATPYGWNTLIAAGKILSLGEVLTTLGEWAPADFSRFGPLEASILALIGVALWRGLSLPWPRLLLLLGLLHMALAHVRS
IESFALLAPLALARPWAEQLASRRTPPPGAKAEFVLPGWAAVASVLAIVGATIAVAPRLTYQFVETQMPEQALAAAQRNG
AERILNGYEFGGYLISRRVPVFIDGRAELYGERMVMDMVRAVAGRDTAALDRFIVDYDIDATLLPAHAPIIGLMDRRAGW
HRAYADDVAVVHLRDRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53280; Mature: 53149

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSGRFSRAASHAVTLQAIQSSETAAGKGGVLPLLVGCGALVYLLAIGDSFLQDSDTFW
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
QIETGRWILAHGAVPTTDVFSFTKAGAPWMSSSWLAQVIFALAMKAGWVGPVIVTAFAAA
EEECCCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SAFALFAAYLERYASALVTTALTMLAVTLTVPHLLTRPHVLALPLMVGWFIGLIDAADRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AAPRWALLIVIALWANIHGGFGLGLLLIAPAALEALRQADPARRVALALRWGAFGVAALA
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SCCATPYGWNTLIAAGKILSLGEVLTTLGEWAPADFSRFGPLEASILALIGVALWRGLSL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCC
PWPRLLLLLGLLHMALAHVRSIESFALLAPLALARPWAEQLASRRTPPPGAKAEFVLPGW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEECCCH
AAVASVLAIVGATIAVAPRLTYQFVETQMPEQALAAAQRNGAERILNGYEFGGYLISRRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCHHHCCCCCCCCC
PVFIDGRAELYGERMVMDMVRAVAGRDTAALDRFIVDYDIDATLLPAHAPIIGLMDRRAG
CEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEECCCCCHHHHHHCCCC
WHRAYADDVAVVHLRDRQ
CCHHHHCCEEEEEEECCC
>Mature Secondary Structure 
AYSGRFSRAASHAVTLQAIQSSETAAGKGGVLPLLVGCGALVYLLAIGDSFLQDSDTFW
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
QIETGRWILAHGAVPTTDVFSFTKAGAPWMSSSWLAQVIFALAMKAGWVGPVIVTAFAAA
EEECCCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SAFALFAAYLERYASALVTTALTMLAVTLTVPHLLTRPHVLALPLMVGWFIGLIDAADRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AAPRWALLIVIALWANIHGGFGLGLLLIAPAALEALRQADPARRVALALRWGAFGVAALA
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SCCATPYGWNTLIAAGKILSLGEVLTTLGEWAPADFSRFGPLEASILALIGVALWRGLSL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCC
PWPRLLLLLGLLHMALAHVRSIESFALLAPLALARPWAEQLASRRTPPPGAKAEFVLPGW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEECCCH
AAVASVLAIVGATIAVAPRLTYQFVETQMPEQALAAAQRNGAERILNGYEFGGYLISRRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCHHHCCCCCCCCC
PVFIDGRAELYGERMVMDMVRAVAGRDTAALDRFIVDYDIDATLLPAHAPIIGLMDRRAG
CEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEECCCCCHHHHHHCCCC
WHRAYADDVAVVHLRDRQ
CCHHHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA