| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is caiD [C]
Identifier: 86750369
GI number: 86750369
Start: 3725769
End: 3726548
Strand: Reverse
Name: caiD [C]
Synonym: RPB_3258
Alternate gene names: 86750369
Gene position: 3726548-3725769 (Counterclockwise)
Preceding gene: 86750370
Following gene: 86750368
Centisome position: 69.89
GC content: 65.38
Gene sequence:
>780_bases ATGAGCAATGACGCCGTGATCATCGAACAGCGCGATCAGGCGCTGTGGATCACCATCAACCGTCCCGACAAGCGCAACGC CATCAATGCCGGTGTGGTCGAAGGCATCAGGACCGGCTGGAAGCAGGCGCATGACGATCCGTCGGTGCGCGTGATTGTAC TGACCGGCGCCGGTGACAAGGCGTTCTGCGCCGGCGCCGACCTGCAATCCACCGGGGCCGCGTTCTCGTTCGACTTCTCC AAGCCGAATGTCGACTACGCCGATCTGCTGCGGCTGGCGCAGAACGCCACCAAGCCGTCGATCGCCCGCGTCAACGGCAC CTGCATGGCCGGCGGCATGGGCCTGCTGTGCATGACCGACATGGCGGTGGCGGCGGATCACGTCCTGTTCGGGCTGCCGG AGGTCAAGGTCGGCGTGTTCCCGATGCAGGTGATGAGCCTGTTGCAGGACATCGCGCCGCGCCGGCTGATCAATGAATGG GCGCTGACCGGCGAGCCGTTCGATGCGCCGACCGCGTGCGACGCGGGCCTGCTGAACTACGTGGTGCCGGGCGGCGAGCT CGACGCCAAGGTCGACTGGCTGGTCAAGCGGCTGACCGACAAATCACCGACCGCGATCCGCCGCGGCAAATACGCGATGC GGGCGATCGCGTCGATGTCGTTCGACGAGAGCATCGCCTACACCGAAAGCCAGATTGCGCTCTTGGCGATGACCGAAGAC GCCAAAGAGGGCCTGAAGGCCTTCGCGGAGAAGCGCAAGCCGGTTTGGCCGGGGAAGTGA
Upstream 100 bases:
>100_bases ATTGCGAGCGAAGCGAAGCAATCCAGAAGCTCCGTGCGCTGAGCTGGATTGCTTCGTCGCTTCGCTCCTCGCAATGACGA GACCTGAGGACAGACCGACC
Downstream 100 bases:
>100_bases CGCGCCGCTCGTTGCGGTCACGGTCCGGTTAACCGGACGTTATCGCCGCATATGGCCTATTCGGGGCGATTCTCCCGTGC TGCGAGCCATGCCGTGACCC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSNDAVIIEQRDQALWITINRPDKRNAINAGVVEGIRTGWKQAHDDPSVRVIVLTGAGDKAFCAGADLQSTGAAFSFDFS KPNVDYADLLRLAQNATKPSIARVNGTCMAGGMGLLCMTDMAVAADHVLFGLPEVKVGVFPMQVMSLLQDIAPRRLINEW ALTGEPFDAPTACDAGLLNYVVPGGELDAKVDWLVKRLTDKSPTAIRRGKYAMRAIASMSFDESIAYTESQIALLAMTED AKEGLKAFAEKRKPVWPGK
Sequences:
>Translated_259_residues MSNDAVIIEQRDQALWITINRPDKRNAINAGVVEGIRTGWKQAHDDPSVRVIVLTGAGDKAFCAGADLQSTGAAFSFDFS KPNVDYADLLRLAQNATKPSIARVNGTCMAGGMGLLCMTDMAVAADHVLFGLPEVKVGVFPMQVMSLLQDIAPRRLINEW ALTGEPFDAPTACDAGLLNYVVPGGELDAKVDWLVKRLTDKSPTAIRRGKYAMRAIASMSFDESIAYTESQIALLAMTED AKEGLKAFAEKRKPVWPGK >Mature_258_residues SNDAVIIEQRDQALWITINRPDKRNAINAGVVEGIRTGWKQAHDDPSVRVIVLTGAGDKAFCAGADLQSTGAAFSFDFSK PNVDYADLLRLAQNATKPSIARVNGTCMAGGMGLLCMTDMAVAADHVLFGLPEVKVGVFPMQVMSLLQDIAPRRLINEWA LTGEPFDAPTACDAGLLNYVVPGGELDAKVDWLVKRLTDKSPTAIRRGKYAMRAIASMSFDESIAYTESQIALLAMTEDA KEGLKAFAEKRKPVWPGK
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=255, Percent_Identity=30.9803921568627, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI31542718, Length=251, Percent_Identity=29.4820717131474, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI70995211, Length=266, Percent_Identity=27.4436090225564, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI37594469, Length=141, Percent_Identity=31.9148936170213, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI37594471, Length=141, Percent_Identity=31.9148936170213, Blast_Score=81, Evalue=9e-16, Organism=Escherichia coli, GI221142681, Length=264, Percent_Identity=35.9848484848485, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1787659, Length=262, Percent_Identity=31.2977099236641, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1788597, Length=244, Percent_Identity=33.1967213114754, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87082183, Length=266, Percent_Identity=26.6917293233083, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787660, Length=249, Percent_Identity=28.9156626506024, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI25145438, Length=241, Percent_Identity=31.1203319502075, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=30.4347826086957, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17549921, Length=218, Percent_Identity=27.0642201834862, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17535521, Length=256, Percent_Identity=26.171875, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17540714, Length=223, Percent_Identity=26.457399103139, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI25144160, Length=231, Percent_Identity=26.8398268398268, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI25144157, Length=231, Percent_Identity=26.8398268398268, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560910, Length=264, Percent_Identity=26.5151515151515, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17540306, Length=232, Percent_Identity=25.4310344827586, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17534483, Length=230, Percent_Identity=24.3478260869565, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=212, Percent_Identity=32.5471698113208, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI20129971, Length=239, Percent_Identity=31.7991631799163, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI24653477, Length=239, Percent_Identity=31.7991631799163, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI24653139, Length=266, Percent_Identity=30.0751879699248, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI19922422, Length=260, Percent_Identity=25.3846153846154, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI28571730, Length=142, Percent_Identity=35.2112676056338, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI28571729, Length=142, Percent_Identity=35.2112676056338, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24654903, Length=209, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI21357171, Length=263, Percent_Identity=26.615969581749, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI19920382, Length=258, Percent_Identity=23.6434108527132, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28017; Mature: 27885
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDAVIIEQRDQALWITINRPDKRNAINAGVVEGIRTGWKQAHDDPSVRVIVLTGAGDK CCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC AFCAGADLQSTGAAFSFDFSKPNVDYADLLRLAQNATKPSIARVNGTCMAGGMGLLCMTD EEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCEEEECCCHHHHHHH MAVAADHVLFGLPEVKVGVFPMQVMSLLQDIAPRRLINEWALTGEPFDAPTACDAGLLNY HHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VVPGGELDAKVDWLVKRLTDKSPTAIRRGKYAMRAIASMSFDESIAYTESQIALLAMTED CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECHH AKEGLKAFAEKRKPVWPGK HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SNDAVIIEQRDQALWITINRPDKRNAINAGVVEGIRTGWKQAHDDPSVRVIVLTGAGDK CCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC AFCAGADLQSTGAAFSFDFSKPNVDYADLLRLAQNATKPSIARVNGTCMAGGMGLLCMTD EEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCEEEECCCHHHHHHH MAVAADHVLFGLPEVKVGVFPMQVMSLLQDIAPRRLINEWALTGEPFDAPTACDAGLLNY HHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH VVPGGELDAKVDWLVKRLTDKSPTAIRRGKYAMRAIASMSFDESIAYTESQIALLAMTED CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECHH AKEGLKAFAEKRKPVWPGK HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA