| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is chqB [H]
Identifier: 86750366
GI number: 86750366
Start: 3721785
End: 3722690
Strand: Reverse
Name: chqB [H]
Synonym: RPB_3255
Alternate gene names: 86750366
Gene position: 3722690-3721785 (Counterclockwise)
Preceding gene: 86750368
Following gene: 86750365
Centisome position: 69.82
GC content: 64.46
Gene sequence:
>906_bases ATGCCACAATTCGACGAAACCGAGCTGACCGAAGCCGTCGTCGCGAGCTTCGACGATACGCCTGATCCGCGGCTCAAGCA TCTGATGCGCGAACTGGTCCGTTCGCTGCACGACTATGTCCGCCGCACCGGCCTGACCTTCGAGGAGTGGCAGAAAACGA TCGATTTCCTCACCCGTACCGGGCAGAAATGCACCCCGAGCCGGCAGGAGTTCATCCTGCTGTCGGACGTGCTCGGCGTC TCGATGCTGGTCGATGCGGTCAACCATCGCGAGCGCGGCGGCGCCACGGAGACCACGGTGCTGGGGCCGTTCTACGTCGG CGAGCACAAACCGATGCCGCATGGCGCCGATATTGCCGAAGGTGTCGAGGGCGAGCGGATGTATGTCCAGAGCCGTGTCA CCGATCTTTCCGGCAATCCGTTGGCCGGCGTGCCGGTCGACGTCTGGCACGCCGATGACGACGGCTTCTATGATTCGCAG AAACAGTCCTACGCCGAGGAGGGCCCGTCATTGCGCGCGCGGTTCGTCACCGACGGCGACGGGCGGATCGCGTTCCGCAC CATCCTGCCGTGCAGCTATCCGATCCCGATCGACGGTCCGGTCGGCGAACTGATCCTCGCCTCGCAGCGGCATCCGATGC GGCCGGCGCACGTGCATTTTCTGGTCGATGCGCCGGGCTACGAGCCGCTGATCACGCATGTGTTCATCGAGGGCGACAAA TATCTCGAGTCCGACGCGGTGTTCGGCGTCAAGGACGACCTGATTTCGACCATTGAATTGCGCGATGATGCGGTGATGCC GGATGGCCGCGCGGCGTCGGGGCCGTGGCATTTGATGACCTATGAGTTCCGGCTGAAGCCGGGCAGGGGCGCGGCGCCGA AGCCGATGATGGCGGCGGCGGAGTGA
Upstream 100 bases:
>100_bases CCCCGGCAAGGAGGGGCCGCGCAGGCCGGTCTGCAAGCGCAGCGCTTATCACATGGGAATGCCTGATGTAGCTTTCGCCG TCGCCAACCGGGATTGGAAT
Downstream 100 bases:
>100_bases CAACAGGAGCTCGCATTGAGTGGGGACACGCGCAAATTCGGCCGGGGCGGGCCGGAGATTGCGCCGATCGGACAGGGCAC CTGGTACATCGACCGGGGTG
Product: intradiol ring-cleavage dioxygenase
Products: NA
Alternate protein names: 1,2-HQD [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRTGQKCTPSRQEFILLSDVLGV SMLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAEGVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQ KQSYAEEGPSLRARFVTDGDGRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDK YLESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAAE
Sequences:
>Translated_301_residues MPQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRTGQKCTPSRQEFILLSDVLGV SMLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAEGVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQ KQSYAEEGPSLRARFVTDGDGRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDK YLESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAAE >Mature_300_residues PQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRTGQKCTPSRQEFILLSDVLGVS MLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAEGVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQK QSYAEEGPSLRARFVTDGDGRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDKY LESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAAE
Specific function: Catalyzes the ortho-cleavage of the aromatic ring of hydroxyquinol [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007535 - InterPro: IPR000627 - InterPro: IPR015889 [H]
Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]
EC number: =1.13.11.37 [H]
Molecular weight: Translated: 33492; Mature: 33361
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRT CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GQKCTPSRQEFILLSDVLGVSMLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAE CCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCCCCCCCHHHC GVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQKQSYAEEGPSLRARFVTDGD CCCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCC GRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDK CCEEEEEECCCCCCCCCCCCHHHHEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC YLESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAA EECCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC E C >Mature Secondary Structure PQFDETELTEAVVASFDDTPDPRLKHLMRELVRSLHDYVRRTGLTFEEWQKTIDFLTRT CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GQKCTPSRQEFILLSDVLGVSMLVDAVNHRERGGATETTVLGPFYVGEHKPMPHGADIAE CCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCCCCCCCHHHC GVEGERMYVQSRVTDLSGNPLAGVPVDVWHADDDGFYDSQKQSYAEEGPSLRARFVTDGD CCCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCC GRIAFRTILPCSYPIPIDGPVGELILASQRHPMRPAHVHFLVDAPGYEPLITHVFIEGDK CCEEEEEECCCCCCCCCCCCHHHHEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCC YLESDAVFGVKDDLISTIELRDDAVMPDGRAASGPWHLMTYEFRLKPGRGAAPKPMMAAA EECCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141483 [H]