Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is yitW [H]

Identifier: 86750106

GI number: 86750106

Start: 3403107

End: 3403475

Strand: Reverse

Name: yitW [H]

Synonym: RPB_2989

Alternate gene names: 86750106

Gene position: 3403475-3403107 (Counterclockwise)

Preceding gene: 86750107

Following gene: 86750105

Centisome position: 63.84

GC content: 65.58

Gene sequence:

>369_bases
ATGACCGATACGATCGAAGCCAAGGCCAATATGCAGACCGTCTCGGCGCTGCCGCCCGAGGAGACCGAGCGGCTCGGCAC
CGAGATCGTCGCGGCGCTGAAGACGGTGTTCGACCCGGAAATTCCGGCCGACATTTACGAACTCGGCCTGATCTACAAGG
TCGAGATCAAGGACGACCGCACCGTCGACGTCGACATGACGCTGACGACGCCGAACTGCCCAGCGGCGGCGGAACTGCCG
ACCATGGTCGAGAACGCGGTCGCCACCGTGCCCGGCGTCGGCGTGGTCAACGTCGCCATCGTCTGGGAGCCGCCGTGGAC
GCCGGAGCGGATGAGCGACGAGGCGCGGCTCGTGCTGAATATGTGGTGA

Upstream 100 bases:

>100_bases
AGGTCACGGCGACGTGCCGGGCGTCGTTCGGCATGTATAATACCCGTGAGGAAGTCGACCAACTCGCTAATGCGCTGATC
AAGGCGCGGGACCTGTTCGC

Downstream 100 bases:

>100_bases
GGTGACGTGCGAGGCCTCGCCGTCATTGCGAGGAGCGCAGCGACGAAGCAATCCATGCCCCGTGCACTGAACTGGATTGC
TTCGCTTCGCTCGCAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MTDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDRTVDVDMTLTTPNCPAAAELP
TMVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLNMW

Sequences:

>Translated_122_residues
MTDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDRTVDVDMTLTTPNCPAAAELP
TMVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLNMW
>Mature_121_residues
TDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDRTVDVDMTLTTPNCPAAAELPT
MVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLNMW

Specific function: Unknown

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MIP18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 13382; Mature: 13251

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDR
CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEEECCCC
TVDVDMTLTTPNCPAAAELPTMVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLN
EEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHCCCCEEEEEE
MW
EC
>Mature Secondary Structure 
TDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADIYELGLIYKVEIKDDR
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEEECCCC
TVDVDMTLTTPNCPAAAELPTMVENAVATVPGVGVVNVAIVWEPPWTPERMSDEARLVLN
EEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHCCCCEEEEEE
MW
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]