| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750033
Identifier: 86750033
GI number: 86750033
Start: 3323999
End: 3324823
Strand: Reverse
Name: 86750033
Synonym: RPB_2916
Alternate gene names: NA
Gene position: 3324823-3323999 (Counterclockwise)
Preceding gene: 86750034
Following gene: 86750032
Centisome position: 62.36
GC content: 69.09
Gene sequence:
>825_bases GTGACGTCGCGCGGCTATGCGGTGGACTTGATCATGCTGGTCGGGCAGTCGCTGGCGCGGCTTTTGCGCACGCCGTCGCA TTCGCGCCGGTCCATCGCCGCACGGCGCGGGGCGCGGCACATGCTGCTGGTGTCGGCGGTTCTGGCTGCGGTGATCGTGA TCCTGATGGTCGCGGTCGATGCGTTCGAGATCGGGCTGATGCCGCCGCGTGGCACGCCCAGTCTGTGGCCGCTCAAGATC GTCAACGATTTCGGCAAGTCCACCTACGTGCTGTGGGCTCTGCTGGCGCTGATGGTCGCCGTGGCGGTGCTGCTGCCGCG GCTCGCCGGGGCGTCGCGCGCGGTGATGATCGGGATCGGCACCCGCGTGCAATACGTGTTCCTCGCCGTGCTGGTGCCTG TGCTCGCCGGCGAGGTGCTGAAGGGCGCGATCGGGCGTGGCCGACCATTCGTCGGGGGCGCGGCCAATCCGTTCAATTTC TCGGCTTTCTCGTGGAGCGAGGCCTATGCCAGCCTGCCGTCGGGCCACGCCATCACCGCCTTCGCGCTGGCCGCCGCGGT GTCGGCGCTGTTCCCGCGGTTGCGGCTGTTGATGTTTCTGTATGCGATCACGATCGGCGTCTGCCGGCTGGTGCTGCTGG CGCATCACCCGAGCGACGTCGTTGCCGGCGCCCTGCTGGGGATCATCGGCGCGCTCGCCGTGCGCTATTGGTTCGCCGCG CGTCGGCTGGCGTTCACGATCCGCCCGGACGGCACCATCGAACCGCTGCCCGGGCCGTCCTGGGAGCGCGTCAAAAGGGT TGCCCGGGACGCCTTTGCCCCATAA
Upstream 100 bases:
>100_bases ACGCGCATCGACGGCTACAATTTCTCGCAGGGCAAGCCGGTCTCGATCGCGATCTTCCGCTCCGAAGGCACGCAGTGAGA TGAAGCCGGGCGAGGGCGCC
Downstream 100 bases:
>100_bases GCCTTTGCCCCATAAGCCTTGGCCCCGTAAGAAGCGGTCGCGCCGGCGTGCGCCCCGGCCGCAAGTTCCCGACGCCCCCC GGATTGTCCCGAGCCATGCC
Product: phosphoesterase, PA-phosphatase related
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase-Like Protein; PA-Phosphatase Related Phosphoesterase; Phosphoesterase
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTSRGYAVDLIMLVGQSLARLLRTPSHSRRSIAARRGARHMLLVSAVLAAVIVILMVAVDAFEIGLMPPRGTPSLWPLKI VNDFGKSTYVLWALLALMVAVAVLLPRLAGASRAVMIGIGTRVQYVFLAVLVPVLAGEVLKGAIGRGRPFVGGAANPFNF SAFSWSEAYASLPSGHAITAFALAAAVSALFPRLRLLMFLYAITIGVCRLVLLAHHPSDVVAGALLGIIGALAVRYWFAA RRLAFTIRPDGTIEPLPGPSWERVKRVARDAFAP
Sequences:
>Translated_274_residues MTSRGYAVDLIMLVGQSLARLLRTPSHSRRSIAARRGARHMLLVSAVLAAVIVILMVAVDAFEIGLMPPRGTPSLWPLKI VNDFGKSTYVLWALLALMVAVAVLLPRLAGASRAVMIGIGTRVQYVFLAVLVPVLAGEVLKGAIGRGRPFVGGAANPFNF SAFSWSEAYASLPSGHAITAFALAAAVSALFPRLRLLMFLYAITIGVCRLVLLAHHPSDVVAGALLGIIGALAVRYWFAA RRLAFTIRPDGTIEPLPGPSWERVKRVARDAFAP >Mature_273_residues TSRGYAVDLIMLVGQSLARLLRTPSHSRRSIAARRGARHMLLVSAVLAAVIVILMVAVDAFEIGLMPPRGTPSLWPLKIV NDFGKSTYVLWALLALMVAVAVLLPRLAGASRAVMIGIGTRVQYVFLAVLVPVLAGEVLKGAIGRGRPFVGGAANPFNFS AFSWSEAYASLPSGHAITAFALAAAVSALFPRLRLLMFLYAITIGVCRLVLLAHHPSDVVAGALLGIIGALAVRYWFAAR RLAFTIRPDGTIEPLPGPSWERVKRVARDAFAP
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29285; Mature: 29154
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRGYAVDLIMLVGQSLARLLRTPSHSRRSIAARRGARHMLLVSAVLAAVIVILMVAVD CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AFEIGLMPPRGTPSLWPLKIVNDFGKSTYVLWALLALMVAVAVLLPRLAGASRAVMIGIG HHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC TRVQYVFLAVLVPVLAGEVLKGAIGRGRPFVGGAANPFNFSAFSWSEAYASLPSGHAITA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHH FALAAAVSALFPRLRLLMFLYAITIGVCRLVLLAHHPSDVVAGALLGIIGALAVRYWFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RRLAFTIRPDGTIEPLPGPSWERVKRVARDAFAP HHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure TSRGYAVDLIMLVGQSLARLLRTPSHSRRSIAARRGARHMLLVSAVLAAVIVILMVAVD CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AFEIGLMPPRGTPSLWPLKIVNDFGKSTYVLWALLALMVAVAVLLPRLAGASRAVMIGIG HHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC TRVQYVFLAVLVPVLAGEVLKGAIGRGRPFVGGAANPFNFSAFSWSEAYASLPSGHAITA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHH FALAAAVSALFPRLRLLMFLYAITIGVCRLVLLAHHPSDVVAGALLGIIGALAVRYWFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RRLAFTIRPDGTIEPLPGPSWERVKRVARDAFAP HHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA