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The map label for this gene is arnC [H]

Identifier: 86750032

GI number: 86750032

Start: 3323145

End: 3323903

Strand: Reverse

Name: arnC [H]

Synonym: RPB_2915

Alternate gene names: 86750032

Gene position: 3323903-3323145 (Counterclockwise)

Preceding gene: 86750033

Following gene: 86750031

Centisome position: 62.34

GC content: 68.38

Gene sequence:

>759_bases
ATGCCTGAATTGATGCCAGACTCCGGTGCGCCGCCTGCGGTGTCCATTGTGGTGCCGGTGCGCAACGAGGCCGACAATGT
CGCCCCGCTGATTGCCGAGATCGCCGCCGCGCTCGACGGGCGCTGGGCCTACGAGATCGTCTATGTCGACGACGGCTCGA
CCGACGCCACGCCGCAACGCCTGATGGCGCTGCGCCGCGAGCGCGCCAATCTGCGCCAGATCCGCCATGCGAAGTCCTGC
GGCCAGTCGGCGGCGGTGCGCACCGGCGTCCGCGCCGCGCGCGGCGGGATCGTGGCGACGCTCGACGGCGACGGCCAGAA
CAATCCGGCGTTCATCCCCGATCTGATCCGGGCGCTGGAACAGGGCGGCGAGCGCTGCGGTCTCGCCGCCGGTCAGCGTG
TCGGCCGCAAGGACACCGGCTTCAAGAAGCTGCAGTCCCGCGTCGCCAACAAGGTGCGCGACGCCATCCTGCGCGACGGA
ACCCGCGATTCCGGTTGCGGCCTGAAGGCGTTTCGCCGCGAGGTGTTCTTGGCGCTGCCGTATTTCGATGGCTTGCATCG
TTTCCTGCCGGCGCTGGTGCGCCGCGAAGGCTACGACATCGTTTATGTCGACGTTGCCGACCGGCCGCGGCTGTCCGGCG
TATCCAACTATGGCTTCTTCGATCGGCTGTGGGTCGGTCTGATGGATCTCGCCGGCGTGTGGTGGCTGATCCGCCGCAAG
AAGGCCGTGCCCGCAGCGGCCGAGGTGAACGAATGCTGA

Upstream 100 bases:

>100_bases
CATAAGCCTTTGCCCCATAAGCCTTGGCCCCGTAAGAAGCGGTCGCGCCGGCGTGCGCCCCGGCCGCAAGTTCCCGACGC
CCCCCGGATTGTCCCGAGCC

Downstream 100 bases:

>100_bases
TTCAATACGGGCAAGCGCTCGGCGACTATCTCTACGACGTGTTCGTCGCCAAGTTCGATTTCTGGCTGGCCTTCGGCCTG
GTCGCGCAATTGCTGTTCAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPELMPDSGAPPAVSIVVPVRNEADNVAPLIAEIAAALDGRWAYEIVYVDDGSTDATPQRLMALRRERANLRQIRHAKSC
GQSAAVRTGVRAARGGIVATLDGDGQNNPAFIPDLIRALEQGGERCGLAAGQRVGRKDTGFKKLQSRVANKVRDAILRDG
TRDSGCGLKAFRREVFLALPYFDGLHRFLPALVRREGYDIVYVDVADRPRLSGVSNYGFFDRLWVGLMDLAGVWWLIRRK
KAVPAAAEVNEC

Sequences:

>Translated_252_residues
MPELMPDSGAPPAVSIVVPVRNEADNVAPLIAEIAAALDGRWAYEIVYVDDGSTDATPQRLMALRRERANLRQIRHAKSC
GQSAAVRTGVRAARGGIVATLDGDGQNNPAFIPDLIRALEQGGERCGLAAGQRVGRKDTGFKKLQSRVANKVRDAILRDG
TRDSGCGLKAFRREVFLALPYFDGLHRFLPALVRREGYDIVYVDVADRPRLSGVSNYGFFDRLWVGLMDLAGVWWLIRRK
KAVPAAAEVNEC
>Mature_251_residues
PELMPDSGAPPAVSIVVPVRNEADNVAPLIAEIAAALDGRWAYEIVYVDDGSTDATPQRLMALRRERANLRQIRHAKSCG
QSAAVRTGVRAARGGIVATLDGDGQNNPAFIPDLIRALEQGGERCGLAAGQRVGRKDTGFKKLQSRVANKVRDAILRDGT
RDSGCGLKAFRREVFLALPYFDGLHRFLPALVRREGYDIVYVDVADRPRLSGVSNYGFFDRLWVGLMDLAGVWWLIRRKK
AVPAAAEVNEC

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=220, Percent_Identity=30.4545454545455, Blast_Score=97, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24585265, Length=228, Percent_Identity=27.6315789473684, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 27598; Mature: 27467

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELMPDSGAPPAVSIVVPVRNEADNVAPLIAEIAAALDGRWAYEIVYVDDGSTDATPQR
CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHH
LMALRRERANLRQIRHAKSCGQSAAVRTGVRAARGGIVATLDGDGQNNPAFIPDLIRALE
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHH
QGGERCGLAAGQRVGRKDTGFKKLQSRVANKVRDAILRDGTRDSGCGLKAFRREVFLALP
HCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
YFDGLHRFLPALVRREGYDIVYVDVADRPRLSGVSNYGFFDRLWVGLMDLAGVWWLIRRK
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KAVPAAAEVNEC
HCCCCCCCCCCC
>Mature Secondary Structure 
PELMPDSGAPPAVSIVVPVRNEADNVAPLIAEIAAALDGRWAYEIVYVDDGSTDATPQR
CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHH
LMALRRERANLRQIRHAKSCGQSAAVRTGVRAARGGIVATLDGDGQNNPAFIPDLIRALE
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHH
QGGERCGLAAGQRVGRKDTGFKKLQSRVANKVRDAILRDGTRDSGCGLKAFRREVFLALP
HCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
YFDGLHRFLPALVRREGYDIVYVDVADRPRLSGVSNYGFFDRLWVGLMDLAGVWWLIRRK
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KAVPAAAEVNEC
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA