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The map label for this gene is arnT [H]

Identifier: 86750034

GI number: 86750034

Start: 3324846

End: 3326588

Strand: Reverse

Name: arnT [H]

Synonym: RPB_2917

Alternate gene names: 86750034

Gene position: 3326588-3324846 (Counterclockwise)

Preceding gene: 86750035

Following gene: 86750033

Centisome position: 62.39

GC content: 68.39

Gene sequence:

>1743_bases
ATGATCGAGACCTCTGCAACACGCCGCTTTGGCGCCCCCCGCGAGCCGAAATCCGCCATCGACCCCGGCCGCGGGCTGGT
GGCCGTGCTGGATTTCGTGTCCGTCAGCCACTTTCGCGCCGTGATCTTTCTCGCTCTGGTCGGGCTGGTGTTCTTCCTGC
CGGGCTTCTTCAACATCCCGCCGATCGACCGCGACGAGGCCCGCTTCGCGCAGGCCACCAAGCAGATGGTCGAGACCGGC
GATTTCGTCGACATCCGTTTCCAGGACGAGGTCCGCTACAAGAAGCCGGTCGGGATCTACTGGCTGCAGGCCGCGGTGGT
CGAGACCGCGTCGAAACTCGGCCTACCGCGCGCCCAGGTCCGGATCTGGCTGTACCGCGTGCCGTCGATGGCGGGTGCGA
TCGGCGCCGTGCTGATGACCTATTGGGCGGCGCTGGCCTTCATCGGCCGGCGCGGCGCCGTCGTCGCCGGGCTGCTGTTG
TGCAGTTCGATCCTGCTCGGGGTCGAGGCGCGGCTGGCCAAGACCGACGCCTTCCTGCTGTTCACCGTCACCGCCGCATT
GGGCGCGATGGCGCACGTCTATCTCGCCTGGCAGCGCGGCGACGATCGCACCAATTCATGGGCGACGCCGGCGGTGTTCT
GGACCGCGCTCGCCGCGGGCATCCTGCTCAAGGGCCCGCTGATCCTGATGTTCATCGCGCTGACGGTGATCCCGCTGGCG
ATCATGGATCGTTCGGTGGCTTGGCTGTGGCGGCTGAAGCCGCTCGCAGGCATCCCGTGGATGCTGCTGCTGGTGCTGCC
CTGGTTCATCGCGATCTTCCTGCGCGCCGGCGATACGTTCTTCACCGATTCGGTCGGCGGTGACATGCTGAGCAAGATCG
CCAGCCCGAAGGAATCTCACGGCGCGCCGCCGGGCCTGTATTTCCTGCTGTTCTGGGTGACGTTCTGGCCCGGCGCGCCG
CTCGCCGCGATGGCGGCGCCGGCGATCTGGCGGGCCCGGCGCGAGCCCGGCGCGCAATTTCTGCTGGCGTGGCTGATCCC
GTCCTGGGTCGTGTTCGAGATCGTGATCACCAAGCTGCCGCACTACGTGCTGCCGCTGTATCCGGCGATCGCGATCATGA
CCGCGGGCGCGATCGAGCGCAGCGTGCTGTCGCGCTCGTGGCTGACCCGCGGCGCGGCGTGGTGGTTCGGAATCCCTGTG
GTGGTGCTGTCGCTGGCGATCGTCGGTGCGATGGTCCTGACCCGGCAGCCGGCGTTTCTGGCCTGGCCGTTCGTGGCGGC
GTCGCTGATCTTCGGGCTGTTCGCCTGGCGGCTGTTCGACGAGAATCGCGCCGAGGCTTCGCTGCTCAACGCCTCGCTGG
CGTCGCTGTTTCTGATCACCGCGACGCTCGGCGTGGTGGTGCCGACGCTGCGGCCGGTGTTCCCGAGTGTCGAGATCGCG
CAGGCGCTGCGCAAGGTGGTGTGCGTCGGGCCGAAGGTCGCGGCCGTCGGCTATCACGAGCCGAGCCTGGTGTTCATGAC
CGGCACCGACACGCTGCTGACCGACGGCTCCGGCGCCGCCGACTTCCTGCTCGGCGGCAGCTGCCGCTTCGCCCTGGTGG
AAGCCCGCAGCGAGCGCGTCTTCGCGCAGCGGGCCGAGGCGATCGGGCTGCGCTACAACGTGGCGACGCGCATCGACGGC
TACAATTTCTCGCAGGGCAAGCCGGTCTCGATCGCGATCTTCCGCTCCGAAGGCACGCAGTGA

Upstream 100 bases:

>100_bases
GATGGACGCCGTCGGCGCGGCGGCAACAGTCGTGGTGAGAATCCAGTAGCAGCCCGGCCAAGTGGTTGTCCGACTATCGG
TTTCAGCGTATGCGAAACCG

Downstream 100 bases:

>100_bases
GATGAAGCCGGGCGAGGGCGCCGTGACGTCGCGCGGCTATGCGGTGGACTTGATCATGCTGGTCGGGCAGTCGCTGGCGC
GGCTTTTGCGCACGCCGTCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MIETSATRRFGAPREPKSAIDPGRGLVAVLDFVSVSHFRAVIFLALVGLVFFLPGFFNIPPIDRDEARFAQATKQMVETG
DFVDIRFQDEVRYKKPVGIYWLQAAVVETASKLGLPRAQVRIWLYRVPSMAGAIGAVLMTYWAALAFIGRRGAVVAGLLL
CSSILLGVEARLAKTDAFLLFTVTAALGAMAHVYLAWQRGDDRTNSWATPAVFWTALAAGILLKGPLILMFIALTVIPLA
IMDRSVAWLWRLKPLAGIPWMLLLVLPWFIAIFLRAGDTFFTDSVGGDMLSKIASPKESHGAPPGLYFLLFWVTFWPGAP
LAAMAAPAIWRARREPGAQFLLAWLIPSWVVFEIVITKLPHYVLPLYPAIAIMTAGAIERSVLSRSWLTRGAAWWFGIPV
VVLSLAIVGAMVLTRQPAFLAWPFVAASLIFGLFAWRLFDENRAEASLLNASLASLFLITATLGVVVPTLRPVFPSVEIA
QALRKVVCVGPKVAAVGYHEPSLVFMTGTDTLLTDGSGAADFLLGGSCRFALVEARSERVFAQRAEAIGLRYNVATRIDG
YNFSQGKPVSIAIFRSEGTQ

Sequences:

>Translated_580_residues
MIETSATRRFGAPREPKSAIDPGRGLVAVLDFVSVSHFRAVIFLALVGLVFFLPGFFNIPPIDRDEARFAQATKQMVETG
DFVDIRFQDEVRYKKPVGIYWLQAAVVETASKLGLPRAQVRIWLYRVPSMAGAIGAVLMTYWAALAFIGRRGAVVAGLLL
CSSILLGVEARLAKTDAFLLFTVTAALGAMAHVYLAWQRGDDRTNSWATPAVFWTALAAGILLKGPLILMFIALTVIPLA
IMDRSVAWLWRLKPLAGIPWMLLLVLPWFIAIFLRAGDTFFTDSVGGDMLSKIASPKESHGAPPGLYFLLFWVTFWPGAP
LAAMAAPAIWRARREPGAQFLLAWLIPSWVVFEIVITKLPHYVLPLYPAIAIMTAGAIERSVLSRSWLTRGAAWWFGIPV
VVLSLAIVGAMVLTRQPAFLAWPFVAASLIFGLFAWRLFDENRAEASLLNASLASLFLITATLGVVVPTLRPVFPSVEIA
QALRKVVCVGPKVAAVGYHEPSLVFMTGTDTLLTDGSGAADFLLGGSCRFALVEARSERVFAQRAEAIGLRYNVATRIDG
YNFSQGKPVSIAIFRSEGTQ
>Mature_580_residues
MIETSATRRFGAPREPKSAIDPGRGLVAVLDFVSVSHFRAVIFLALVGLVFFLPGFFNIPPIDRDEARFAQATKQMVETG
DFVDIRFQDEVRYKKPVGIYWLQAAVVETASKLGLPRAQVRIWLYRVPSMAGAIGAVLMTYWAALAFIGRRGAVVAGLLL
CSSILLGVEARLAKTDAFLLFTVTAALGAMAHVYLAWQRGDDRTNSWATPAVFWTALAAGILLKGPLILMFIALTVIPLA
IMDRSVAWLWRLKPLAGIPWMLLLVLPWFIAIFLRAGDTFFTDSVGGDMLSKIASPKESHGAPPGLYFLLFWVTFWPGAP
LAAMAAPAIWRARREPGAQFLLAWLIPSWVVFEIVITKLPHYVLPLYPAIAIMTAGAIERSVLSRSWLTRGAAWWFGIPV
VVLSLAIVGAMVLTRQPAFLAWPFVAASLIFGLFAWRLFDENRAEASLLNASLASLFLITATLGVVVPTLRPVFPSVEIA
QALRKVVCVGPKVAAVGYHEPSLVFMTGTDTLLTDGSGAADFLLGGSCRFALVEARSERVFAQRAEAIGLRYNVATRIDG
YNFSQGKPVSIAIFRSEGTQ

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=348, Percent_Identity=24.7126436781609, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 63357; Mature: 63357

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETSATRRFGAPREPKSAIDPGRGLVAVLDFVSVSHFRAVIFLALVGLVFFLPGFFNIP
CCCCCCCHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PIDRDEARFAQATKQMVETGDFVDIRFQDEVRYKKPVGIYWLQAAVVETASKLGLPRAQV
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
RIWLYRVPSMAGAIGAVLMTYWAALAFIGRRGAVVAGLLLCSSILLGVEARLAKTDAFLL
EEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
FTVTAALGAMAHVYLAWQRGDDRTNSWATPAVFWTALAAGILLKGPLILMFIALTVIPLA
HHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMDRSVAWLWRLKPLAGIPWMLLLVLPWFIAIFLRAGDTFFTDSVGGDMLSKIASPKESH
HHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCHHC
GAPPGLYFLLFWVTFWPGAPLAAMAAPAIWRARREPGAQFLLAWLIPSWVVFEIVITKLP
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
HYVLPLYPAIAIMTAGAIERSVLSRSWLTRGAAWWFGIPVVVLSLAIVGAMVLTRQPAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AWPFVAASLIFGLFAWRLFDENRAEASLLNASLASLFLITATLGVVVPTLRPVFPSVEIA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
QALRKVVCVGPKVAAVGYHEPSLVFMTGTDTLLTDGSGAADFLLGGSCRFALVEARSERV
HHHHHHHHCCCCEEEECCCCCCEEEEECCCEEEECCCCCHHHEECCCCCEEEEHHHHHHH
FAQRAEAIGLRYNVATRIDGYNFSQGKPVSIAIFRSEGTQ
HHHHHHHHCEEEEEEEEECCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MIETSATRRFGAPREPKSAIDPGRGLVAVLDFVSVSHFRAVIFLALVGLVFFLPGFFNIP
CCCCCCCHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PIDRDEARFAQATKQMVETGDFVDIRFQDEVRYKKPVGIYWLQAAVVETASKLGLPRAQV
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
RIWLYRVPSMAGAIGAVLMTYWAALAFIGRRGAVVAGLLLCSSILLGVEARLAKTDAFLL
EEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
FTVTAALGAMAHVYLAWQRGDDRTNSWATPAVFWTALAAGILLKGPLILMFIALTVIPLA
HHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMDRSVAWLWRLKPLAGIPWMLLLVLPWFIAIFLRAGDTFFTDSVGGDMLSKIASPKESH
HHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCHHC
GAPPGLYFLLFWVTFWPGAPLAAMAAPAIWRARREPGAQFLLAWLIPSWVVFEIVITKLP
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
HYVLPLYPAIAIMTAGAIERSVLSRSWLTRGAAWWFGIPVVVLSLAIVGAMVLTRQPAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AWPFVAASLIFGLFAWRLFDENRAEASLLNASLASLFLITATLGVVVPTLRPVFPSVEIA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
QALRKVVCVGPKVAAVGYHEPSLVFMTGTDTLLTDGSGAADFLLGGSCRFALVEARSERV
HHHHHHHHCCCCEEEECCCCCCEEEEECCCEEEECCCCCHHHEECCCCCEEEEHHHHHHH
FAQRAEAIGLRYNVATRIDGYNFSQGKPVSIAIFRSEGTQ
HHHHHHHHCEEEEEEEEECCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA