| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yczJ [H]
Identifier: 86749791
GI number: 86749791
Start: 3056037
End: 3056339
Strand: Direct
Name: yczJ [H]
Synonym: RPB_2674
Alternate gene names: 86749791
Gene position: 3056037-3056339 (Clockwise)
Preceding gene: 86749790
Following gene: 86749793
Centisome position: 57.32
GC content: 62.38
Gene sequence:
>303_bases ATGATCACCGAAATCGCACAGATCGACATCAAGCCCGGCAGTGAAGCCGACTTCGAAGCCGCCGTCGCCAAGGCCGGCGC CGCGTTCGGCCGCTCCAAGGGCTTTCACGGCTTCGAGCTACATCGCTCGATCGAAAAGCCGCAGCGCTATCGTTTGATGG TGAAGTGGGAGACGCTGGAGAACCACACCGTCGACTTCCGCGGCTCCGAGAATTTCACCGAGTGGCGCGGCCTGGTCAGT GGATTCTTCGCCTCGCCGCCCGAGGTCGAGCACACCGATACGGTCGTCACGATTCCGGGCTAG
Upstream 100 bases:
>100_bases CGATGCGCATCGGCGCCTGACTGAGCGGCACGGTCGGCTTCAATTGCCGTGCGGAGTGCGATAAGACGCTTGCCCCAGCA AACCACACGGGTGCGCGCGC
Downstream 100 bases:
>100_bases CGGCCAGCACCGCCGGCGGTGCGGCGCTGACCATTTCGGGGGTCGGCTCCGCGCGAAGATGGTTGATCACGACTCGTCCG ATCGCCATCAGCGGCAGCGC
Product: antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MITEIAQIDIKPGSEADFEAAVAKAGAAFGRSKGFHGFELHRSIEKPQRYRLMVKWETLENHTVDFRGSENFTEWRGLVS GFFASPPEVEHTDTVVTIPG
Sequences:
>Translated_100_residues MITEIAQIDIKPGSEADFEAAVAKAGAAFGRSKGFHGFELHRSIEKPQRYRLMVKWETLENHTVDFRGSENFTEWRGLVS GFFASPPEVEHTDTVVTIPG >Mature_100_residues MITEIAQIDIKPGSEADFEAAVAKAGAAFGRSKGFHGFELHRSIEKPQRYRLMVKWETLENHTVDFRGSENFTEWRGLVS GFFASPPEVEHTDTVVTIPG
Specific function: Unknown
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007138 - InterPro: IPR011008 [H]
Pfam domain/function: PF03992 ABM [H]
EC number: NA
Molecular weight: Translated: 11180; Mature: 11180
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITEIAQIDIKPGSEADFEAAVAKAGAAFGRSKGFHGFELHRSIEKPQRYRLMVKWETLE CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCC NHTVDFRGSENFTEWRGLVSGFFASPPEVEHTDTVVTIPG CCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECC >Mature Secondary Structure MITEIAQIDIKPGSEADFEAAVAKAGAAFGRSKGFHGFELHRSIEKPQRYRLMVKWETLE CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCC NHTVDFRGSENFTEWRGLVSGFFASPPEVEHTDTVVTIPG CCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]