| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is thiL [H]
Identifier: 86749757
GI number: 86749757
Start: 3019636
End: 3020607
Strand: Direct
Name: thiL [H]
Synonym: RPB_2640
Alternate gene names: 86749757
Gene position: 3019636-3020607 (Clockwise)
Preceding gene: 86749756
Following gene: 86749758
Centisome position: 56.64
GC content: 69.55
Gene sequence:
>972_bases ATGCCCTCCGGTGAAGACGATCTGATTGCCCGCTACTTCAAGCCGCTTGCGACCGATCCGGGCGCGCTGGGGCTGGTCGA CGACGCGGCGGTGCTGGCGGCGTCGCGCGACGATCTGGTGCTGACCACCGACGCCATCGTCGAGGGCGTGCATTACCTGC CCGGCGATCCGCCCCGGGCCATCGCCCGCAAGGCGCTGCGGGTGAACCTGTCCGACCTCGCCGCCAAGGGGGCGACGCCC GCGGGGTTCCTGCTGACGCTGGCGCTGCGCAGCGCCGACGAGCGCTTCCTGGCGCCGTTCGCACAGGCGCTCGGCGAGGA TGCCGCCCTTTTCGATTGTCCGCTGCTCGGCGGCGATACGGTGTCCACCCCGGGGCCGATGATGATTTCGATCACCGCCA TCGGCCGGGTGCCGCCGGGTCGCATGGTGCGGCGCAACACGCTTTGTGCCGGGGACCGGATCCTCGTCACCGGCACGATC GGCGACTCGGCACTCGGCCTCGACCTGCTGCAGGGCGCGAATGCCGACATCTCCGACGAGCATCGCGCCTTTCTGATCGA CCGCTATCGCGTGCCGCAGCCGCGTTTGGCCTTGGCGCAAGCCATACGTGACCATGCCGGCGCGGCGATGGACGTGTCCG ACGGGCTGGCAGGCGATCTCGCCAAGATGTGCGCCGCCTCCGGCGTCACCGCGATCCTCGACGCTGCGGCCGTCCCGCTC TCCGCTGCGGCGCAGGCGATGATCTCGGGCGAGCCGGCGAAGCTGGCCCGCGTGCTCGGGGGCGGTGACGACTATGAGCT GCTTTGCGGCGTTGCAGCACAGCAGCTCGACCCGTTTCTTGCTGCAGCGCAGCGAATAGGGGTTTCGGTCAGCGTCATCG GCTCCGCCGAAGCCGGAACCGGAGCGCCGCGATGGCGCGACGCCGAGCATCGTGACATCGCGCTGTCAGGGCTGTCATAC AGTCATTTCTAG
Upstream 100 bases:
>100_bases CGTCGCCCCTCACCCCAACCCTCTCCCCGCAAGAGCGGGGCGAGGGAGCGCGCCGTGCCGCGAGGCGACCATCGCGGCAC AACGTCGAGGTTATTAGTGC
Downstream 100 bases:
>100_bases CGATTAGTCGCAGGTATTCCGGCGCAAGGGATGCGTCTGGAATTCGCCCAAGGCCGCGGGAAAAGCCGCGCTTAGTCCCT TCGCAGCGATTGCGGAGCAC
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MPSGEDDLIARYFKPLATDPGALGLVDDAAVLAASRDDLVLTTDAIVEGVHYLPGDPPRAIARKALRVNLSDLAAKGATP AGFLLTLALRSADERFLAPFAQALGEDAALFDCPLLGGDTVSTPGPMMISITAIGRVPPGRMVRRNTLCAGDRILVTGTI GDSALGLDLLQGANADISDEHRAFLIDRYRVPQPRLALAQAIRDHAGAAMDVSDGLAGDLAKMCAASGVTAILDAAAVPL SAAAQAMISGEPAKLARVLGGGDDYELLCGVAAQQLDPFLAAAQRIGVSVSVIGSAEAGTGAPRWRDAEHRDIALSGLSY SHF
Sequences:
>Translated_323_residues MPSGEDDLIARYFKPLATDPGALGLVDDAAVLAASRDDLVLTTDAIVEGVHYLPGDPPRAIARKALRVNLSDLAAKGATP AGFLLTLALRSADERFLAPFAQALGEDAALFDCPLLGGDTVSTPGPMMISITAIGRVPPGRMVRRNTLCAGDRILVTGTI GDSALGLDLLQGANADISDEHRAFLIDRYRVPQPRLALAQAIRDHAGAAMDVSDGLAGDLAKMCAASGVTAILDAAAVPL SAAAQAMISGEPAKLARVLGGGDDYELLCGVAAQQLDPFLAAAQRIGVSVSVIGSAEAGTGAPRWRDAEHRDIALSGLSY SHF >Mature_322_residues PSGEDDLIARYFKPLATDPGALGLVDDAAVLAASRDDLVLTTDAIVEGVHYLPGDPPRAIARKALRVNLSDLAAKGATPA GFLLTLALRSADERFLAPFAQALGEDAALFDCPLLGGDTVSTPGPMMISITAIGRVPPGRMVRRNTLCAGDRILVTGTIG DSALGLDLLQGANADISDEHRAFLIDRYRVPQPRLALAQAIRDHAGAAMDVSDGLAGDLAKMCAASGVTAILDAAAVPLS AAAQAMISGEPAKLARVLGGGDDYELLCGVAAQQLDPFLAAAQRIGVSVSVIGSAEAGTGAPRWRDAEHRDIALSGLSYS HF
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=328, Percent_Identity=40.2439024390244, Blast_Score=174, Evalue=8e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 33282; Mature: 33151
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGEDDLIARYFKPLATDPGALGLVDDAAVLAASRDDLVLTTDAIVEGVHYLPGDPPRA CCCCHHHHHHHHHHHHCCCCCCEEECCCHHHEEECCCCEEEEHHHHHCCHHCCCCCCHHH IARKALRVNLSDLAAKGATPAGFLLTLALRSADERFLAPFAQALGEDAALFDCPLLGGDT HHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCC VSTPGPMMISITAIGRVPPGRMVRRNTLCAGDRILVTGTIGDSALGLDLLQGANADISDE CCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCC HRAFLIDRYRVPQPRLALAQAIRDHAGAAMDVSDGLAGDLAKMCAASGVTAILDAAAVPL CCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCH SAAAQAMISGEPAKLARVLGGGDDYELLCGVAAQQLDPFLAAAQRIGVSVSVIGSAEAGT HHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC GAPRWRDAEHRDIALSGLSYSHF CCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure PSGEDDLIARYFKPLATDPGALGLVDDAAVLAASRDDLVLTTDAIVEGVHYLPGDPPRA CCCHHHHHHHHHHHHCCCCCCEEECCCHHHEEECCCCEEEEHHHHHCCHHCCCCCCHHH IARKALRVNLSDLAAKGATPAGFLLTLALRSADERFLAPFAQALGEDAALFDCPLLGGDT HHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCC VSTPGPMMISITAIGRVPPGRMVRRNTLCAGDRILVTGTIGDSALGLDLLQGANADISDE CCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCC HRAFLIDRYRVPQPRLALAQAIRDHAGAAMDVSDGLAGDLAKMCAASGVTAILDAAAVPL CCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCH SAAAQAMISGEPAKLARVLGGGDDYELLCGVAAQQLDPFLAAAQRIGVSVSVIGSAEAGT HHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC GAPRWRDAEHRDIALSGLSYSHF CCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]