| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is iorA [H]
Identifier: 86749400
GI number: 86749400
Start: 2628922
End: 2629386
Strand: Direct
Name: iorA [H]
Synonym: RPB_2280
Alternate gene names: 86749400
Gene position: 2628922-2629386 (Clockwise)
Preceding gene: 86749399
Following gene: 86749401
Centisome position: 49.31
GC content: 66.02
Gene sequence:
>465_bases ATGGCCGCGTACGCACTCAAGATCAACGGACGCACTCACACCGTCGATGTCGATCCCGACACCCCGCTGCTGTGGGCAAT CCGCGACGGCGCCGGACTGATGGGAACTAAGTACGGCTGCGGCGTCGCGCAATGCGGCGCCTGCACGGTTTTCGTCGACG GCAATACGGTGCGCTCGTGTTCGCTGCCGGTGTCGGCGGTGGGAACCAGCGAAGTCACGACGATCGAAGGCCTTCGCGGC AGGGAAGGCGCTGCGGTGCAGCAGGCCTGGGTGGCGCTGGACGTGCCGCAATGCGGCTATTGCCAGTCCGGCCAGGTGAT GAGCGCGACCTCCTTGCTGTCGAAAAATCCGAAGCCGACCGATCGGGACATCGATCTGGCGATGACCGGCAACATCTGCC GCTGCGCCACCTACGTGCGGATCCGCGCCGCGATCCACCAGGCCGCCAAGTCGCTGGAGGGCTGA
Upstream 100 bases:
>100_bases GTGTAAACACATACGTTGGATTGCCCGGACGCAAAATCTTGTGATTGTCGTTGCGAGCTATTCTTATGTATGATCTCCGT CATATCAAACGGGGGTCGAC
Downstream 100 bases:
>100_bases GCATGACCATTCATGACACGAAGCTGTCGCGCCGTTCGCTGCTGAAGGCCGGCGCCGGCCTCGTCATCGGCGCCTATGTC GTTCGCGGCGGCAAGGCGTT
Product: (2Fe-2S)-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MAAYALKINGRTHTVDVDPDTPLLWAIRDGAGLMGTKYGCGVAQCGACTVFVDGNTVRSCSLPVSAVGTSEVTTIEGLRG REGAAVQQAWVALDVPQCGYCQSGQVMSATSLLSKNPKPTDRDIDLAMTGNICRCATYVRIRAAIHQAAKSLEG
Sequences:
>Translated_154_residues MAAYALKINGRTHTVDVDPDTPLLWAIRDGAGLMGTKYGCGVAQCGACTVFVDGNTVRSCSLPVSAVGTSEVTTIEGLRG REGAAVQQAWVALDVPQCGYCQSGQVMSATSLLSKNPKPTDRDIDLAMTGNICRCATYVRIRAAIHQAAKSLEG >Mature_153_residues AAYALKINGRTHTVDVDPDTPLLWAIRDGAGLMGTKYGCGVAQCGACTVFVDGNTVRSCSLPVSAVGTSEVTTIEGLRGR EGAAVQQAWVALDVPQCGYCQSGQVMSATSLLSKNPKPTDRDIDLAMTGNICRCATYVRIRAAIHQAAKSLEG
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=144, Percent_Identity=36.8055555555556, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1786480, Length=165, Percent_Identity=40.6060606060606, Blast_Score=110, Evalue=4e-26, Organism=Escherichia coli, GI1789232, Length=137, Percent_Identity=39.4160583941606, Blast_Score=91, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17540638, Length=159, Percent_Identity=37.7358490566038, Blast_Score=100, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17539860, Length=153, Percent_Identity=33.9869281045752, Blast_Score=90, Evalue=4e-19, Organism=Caenorhabditis elegans, GI32566215, Length=153, Percent_Identity=33.9869281045752, Blast_Score=90, Evalue=4e-19, Organism=Drosophila melanogaster, GI17737937, Length=144, Percent_Identity=37.5, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI24647193, Length=160, Percent_Identity=35.625, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24647201, Length=152, Percent_Identity=33.5526315789474, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI24647199, Length=154, Percent_Identity=34.4155844155844, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 16136; Mature: 16004
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYALKINGRTHTVDVDPDTPLLWAIRDGAGLMGTKYGCGVAQCGACTVFVDGNTVRSC CCEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEC SLPVSAVGTSEVTTIEGLRGREGAAVQQAWVALDVPQCGYCQSGQVMSATSLLSKNPKPT CCCEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHCCCCCC DRDIDLAMTGNICRCATYVRIRAAIHQAAKSLEG CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAYALKINGRTHTVDVDPDTPLLWAIRDGAGLMGTKYGCGVAQCGACTVFVDGNTVRSC CEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEC SLPVSAVGTSEVTTIEGLRGREGAAVQQAWVALDVPQCGYCQSGQVMSATSLLSKNPKPT CCCEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHCCCCCC DRDIDLAMTGNICRCATYVRIRAAIHQAAKSLEG CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]