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The map label for this gene is 86749339

Identifier: 86749339

GI number: 86749339

Start: 2531968

End: 2533695

Strand: Direct

Name: 86749339

Synonym: RPB_2219

Alternate gene names: NA

Gene position: 2531968-2533695 (Clockwise)

Preceding gene: 86749338

Following gene: 86749340

Centisome position: 47.49

GC content: 63.89

Gene sequence:

>1728_bases
GTGCGATTCGAAATTAGCTATCAGCGTCGCGGCTCCACGGCCGCGCGCGCGGCGGTGTTTTGCCTGAAATCGGCGACGGT
CGGACTGGCCGCAGTCGGCCTGGTGAGGCCGGCTGACGCCCGCGAGGTTGCCGTCTCGGCCGCAGCGCAGCCGGCCGCGG
CGCAGCCGTCCAATCCGGCCGCTCAACCGCAGCCGGCGCAACGCTTCGACATCGATGATTTCGCAATCCAGGGCGCCGAC
AAGTTGCCGCAGATCGAGATCGAAGAGGCGGTCTATCCGTTTCTCGGACCGAACAAGACGGCGGATGACGTCGAGAAGGC
GCGGGCCGCGCTGGAGAAGGCGTATCACGACAAGGGATTTCAGACCGTCAGTGTGGCGGTGCCTCCACAGAATGTCGGGC
GCAAGGTGGTGGTCCTGAAGGTCACCGAGATGAAGGTCGGCCGGCTGCGGGTGAAGAATTCGCGTTATTTCGACGTCGAC
AGGATCAAGCAGACGGCGCCGTCGCTGAAGGAGGGCACGGTTCCTAACTTCAAGGACGTCACCAAGGACATCGTCGCGCT
CAACCAGTGGCCCGACCGCCGGGTCACACCCGCGCTGCGAGCCGGCGTCGCACCGGGCACGGTCGACGTCGACCTCAACG
TCGAAGACAAGGCGCCGATCCACGCTTCCGTCGAAGTGAACAATCGCCAGTCGCCGAGCACCACGGCGACGCGTCTGAAC
GCCACGGTCCACTACGACAATCTCTGGCAGCTCGGGCATTCGGCGAGCTTCACCTATCAGGTCGCGCCGGAGCGGCGGCA
GGATGCCGAGGTGTTCTCCGGCTCGTACCTCGCGCGGCTGCCCAATCTCGATTGGATCAACCTGCTGATCTACGGCGTGT
CGTCGAGTAGCAGCGTCGCCAGCGTCGGCGGTACCAACATCGTCGGTCCCGGCCAGATCATCGGCACGCGTGCGATAATG
ACGTTGCCGGGGCGCGACGGCTTCTTTCACACGCTGTCGGCGGGCCTCGACTACAAGCATTTCGACCAGACGGTGGCGCT
CGGCGCAGACGCCTTCTCGTCGCCGGTCACCTACTATCCGGCAGTCGCCAGCTACGGCGCGACCTTCCAGGGCGAAAACT
ACACAACGCAGTTCAACGCCTCGGTCACCTACAATCTGCGAACCCTGTCGAGCAGCGCCGCCGATTTCGACGCCAAGAGA
TATTTCGCATCGCCGAGCTTCACCCATTTCAACGCGGATGTGTCGCATACCCAGGAATTGCCTGAGGGATTGCAGCTCTG
GGGCAAGGTCGCGTCGCAGGTCGCGGACGGACCGTTGGTGTCGAGCGAGCAGATCAGCGTGGGCGGCATGGACACCGTGC
GCGGCTATCTCGAATCCGAAACGCTCGGCGACGACGGCGTCGTCGGCAATTTCGAACTCCGTAGTCCGGACATCGGTGCC
TGGCTGCAGAAGGAGATGAAGGACGAGACCGGGCAGGGAACACCCCGCTTCACCACGTTCAACGAGTGGCGGGTCTTCGG
CTTCGCGGACGCGGGCCACGCCAACGTTCAGCGGCCGTTGCCCAACCAGATCTCGTCGTTCGACCTGTGGAGCTACGGCG
TCGGCTCCCGGTTCAAAGTGTTCAGCACGATTAACGGGGTCGTCGTGCTGTCGGTGCCGATGAAGGACCAAGCCTACACC
CGCGCGGGTGATCCGCGCTTCAATTTCCGTGTTTGGGGCGAATTCTGA

Upstream 100 bases:

>100_bases
ATTCAGTGTCCGGCCGAGCCAGTCGTCTTCTGAATCGAGATACCGTGAACGCGGCCGCCCGCCGTGTCGTCATGTGCGTG
TCCGGGAGACGAGCGAACCC

Downstream 100 bases:

>100_bases
TGACAATCGAGAAAGACGACGTGCGCGGCGCCGGACGGAGGTGGTCGCGAGGCACCAAGGCTTTGACCAAAGTCGGCTTG
CTTGCTGCGCTCGCCGGCAT

Product: hemolysin activation/secretion protein

Products: NA

Alternate protein names: Polypeptide-Transport-Associated Domain-Containing Protein; Surface Antigen D; Surface Antigen; Polypeptide-Transport-Associated Domain Protein ShlB-Type; Outer Membrane Protein; Exported Surface Antigen Protein; Hemolysin Activator HlyB Domain-Containing Protein; Signal Peptide; POTRA Domain ShlB-Type Family; Hemolysin Activation/Secretion Signal Peptide Protein; TpsB Protein; OMP85 Family Outer Membrane Protein; HlyB Family Hemolysin Activator Protein

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MRFEISYQRRGSTAARAAVFCLKSATVGLAAVGLVRPADAREVAVSAAAQPAAAQPSNPAAQPQPAQRFDIDDFAIQGAD
KLPQIEIEEAVYPFLGPNKTADDVEKARAALEKAYHDKGFQTVSVAVPPQNVGRKVVVLKVTEMKVGRLRVKNSRYFDVD
RIKQTAPSLKEGTVPNFKDVTKDIVALNQWPDRRVTPALRAGVAPGTVDVDLNVEDKAPIHASVEVNNRQSPSTTATRLN
ATVHYDNLWQLGHSASFTYQVAPERRQDAEVFSGSYLARLPNLDWINLLIYGVSSSSSVASVGGTNIVGPGQIIGTRAIM
TLPGRDGFFHTLSAGLDYKHFDQTVALGADAFSSPVTYYPAVASYGATFQGENYTTQFNASVTYNLRTLSSSAADFDAKR
YFASPSFTHFNADVSHTQELPEGLQLWGKVASQVADGPLVSSEQISVGGMDTVRGYLESETLGDDGVVGNFELRSPDIGA
WLQKEMKDETGQGTPRFTTFNEWRVFGFADAGHANVQRPLPNQISSFDLWSYGVGSRFKVFSTINGVVVLSVPMKDQAYT
RAGDPRFNFRVWGEF

Sequences:

>Translated_575_residues
MRFEISYQRRGSTAARAAVFCLKSATVGLAAVGLVRPADAREVAVSAAAQPAAAQPSNPAAQPQPAQRFDIDDFAIQGAD
KLPQIEIEEAVYPFLGPNKTADDVEKARAALEKAYHDKGFQTVSVAVPPQNVGRKVVVLKVTEMKVGRLRVKNSRYFDVD
RIKQTAPSLKEGTVPNFKDVTKDIVALNQWPDRRVTPALRAGVAPGTVDVDLNVEDKAPIHASVEVNNRQSPSTTATRLN
ATVHYDNLWQLGHSASFTYQVAPERRQDAEVFSGSYLARLPNLDWINLLIYGVSSSSSVASVGGTNIVGPGQIIGTRAIM
TLPGRDGFFHTLSAGLDYKHFDQTVALGADAFSSPVTYYPAVASYGATFQGENYTTQFNASVTYNLRTLSSSAADFDAKR
YFASPSFTHFNADVSHTQELPEGLQLWGKVASQVADGPLVSSEQISVGGMDTVRGYLESETLGDDGVVGNFELRSPDIGA
WLQKEMKDETGQGTPRFTTFNEWRVFGFADAGHANVQRPLPNQISSFDLWSYGVGSRFKVFSTINGVVVLSVPMKDQAYT
RAGDPRFNFRVWGEF
>Mature_575_residues
MRFEISYQRRGSTAARAAVFCLKSATVGLAAVGLVRPADAREVAVSAAAQPAAAQPSNPAAQPQPAQRFDIDDFAIQGAD
KLPQIEIEEAVYPFLGPNKTADDVEKARAALEKAYHDKGFQTVSVAVPPQNVGRKVVVLKVTEMKVGRLRVKNSRYFDVD
RIKQTAPSLKEGTVPNFKDVTKDIVALNQWPDRRVTPALRAGVAPGTVDVDLNVEDKAPIHASVEVNNRQSPSTTATRLN
ATVHYDNLWQLGHSASFTYQVAPERRQDAEVFSGSYLARLPNLDWINLLIYGVSSSSSVASVGGTNIVGPGQIIGTRAIM
TLPGRDGFFHTLSAGLDYKHFDQTVALGADAFSSPVTYYPAVASYGATFQGENYTTQFNASVTYNLRTLSSSAADFDAKR
YFASPSFTHFNADVSHTQELPEGLQLWGKVASQVADGPLVSSEQISVGGMDTVRGYLESETLGDDGVVGNFELRSPDIGA
WLQKEMKDETGQGTPRFTTFNEWRVFGFADAGHANVQRPLPNQISSFDLWSYGVGSRFKVFSTINGVVVLSVPMKDQAYT
RAGDPRFNFRVWGEF

Specific function: Unknown

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62569; Mature: 62569

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFEISYQRRGSTAARAAVFCLKSATVGLAAVGLVRPADAREVAVSAAAQPAAAQPSNPA
CEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCCCCCCC
AQPQPAQRFDIDDFAIQGADKLPQIEIEEAVYPFLGPNKTADDVEKARAALEKAYHDKGF
CCCCCCCCCCCHHHEECCCCCCCCEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
QTVSVAVPPQNVGRKVVVLKVTEMKVGRLRVKNSRYFDVDRIKQTAPSLKEGTVPNFKDV
EEEEEEECCHHCCCEEEEEEEECEEECEEEECCCCEECHHHHHHHCCCCCCCCCCCHHHH
TKDIVALNQWPDRRVTPALRAGVAPGTVDVDLNVEDKAPIHASVEVNNRQSPSTTATRLN
HHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEE
ATVHYDNLWQLGHSASFTYQVAPERRQDAEVFSGSYLARLPNLDWINLLIYGVSSSSSVA
EEEEECHHHHCCCCCCEEEEECCCCCCCHHHHCCCHHHHCCCCCEEEEEEEECCCCCCEE
SVGGTNIVGPGQIIGTRAIMTLPGRDGFFHTLSAGLDYKHFDQTVALGADAFSSPVTYYP
ECCCCCCCCCCCEEECEEEEEECCCCCCHHHHHCCCCHHHHCHHHEECCHHHCCCCEECC
AVASYGATFQGENYTTQFNASVTYNLRTLSSSAADFDAKRYFASPSFTHFNADVSHTQEL
HHHHCCCEECCCCEEEEEECEEEEEEEECCCCCCCCCHHHHCCCCCCEEECCCHHHHHHH
PEGLQLWGKVASQVADGPLVSSEQISVGGMDTVRGYLESETLGDDGVVGNFELRSPDIGA
HHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
WLQKEMKDETGQGTPRFTTFNEWRVFGFADAGHANVQRPLPNQISSFDLWSYGVGSRFKV
HHHHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCEEE
FSTINGVVVLSVPMKDQAYTRAGDPRFNFRVWGEF
EEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MRFEISYQRRGSTAARAAVFCLKSATVGLAAVGLVRPADAREVAVSAAAQPAAAQPSNPA
CEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCCCCCCC
AQPQPAQRFDIDDFAIQGADKLPQIEIEEAVYPFLGPNKTADDVEKARAALEKAYHDKGF
CCCCCCCCCCCHHHEECCCCCCCCEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
QTVSVAVPPQNVGRKVVVLKVTEMKVGRLRVKNSRYFDVDRIKQTAPSLKEGTVPNFKDV
EEEEEEECCHHCCCEEEEEEEECEEECEEEECCCCEECHHHHHHHCCCCCCCCCCCHHHH
TKDIVALNQWPDRRVTPALRAGVAPGTVDVDLNVEDKAPIHASVEVNNRQSPSTTATRLN
HHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEE
ATVHYDNLWQLGHSASFTYQVAPERRQDAEVFSGSYLARLPNLDWINLLIYGVSSSSSVA
EEEEECHHHHCCCCCCEEEEECCCCCCCHHHHCCCHHHHCCCCCEEEEEEEECCCCCCEE
SVGGTNIVGPGQIIGTRAIMTLPGRDGFFHTLSAGLDYKHFDQTVALGADAFSSPVTYYP
ECCCCCCCCCCCEEECEEEEEECCCCCCHHHHHCCCCHHHHCHHHEECCHHHCCCCEECC
AVASYGATFQGENYTTQFNASVTYNLRTLSSSAADFDAKRYFASPSFTHFNADVSHTQEL
HHHHCCCEECCCCEEEEEECEEEEEEEECCCCCCCCCHHHHCCCCCCEEECCCHHHHHHH
PEGLQLWGKVASQVADGPLVSSEQISVGGMDTVRGYLESETLGDDGVVGNFELRSPDIGA
HHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
WLQKEMKDETGQGTPRFTTFNEWRVFGFADAGHANVQRPLPNQISSFDLWSYGVGSRFKV
HHHHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCEEE
FSTINGVVVLSVPMKDQAYTRAGDPRFNFRVWGEF
EEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA