| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is braG [H]
Identifier: 86749171
GI number: 86749171
Start: 2328025
End: 2328765
Strand: Direct
Name: braG [H]
Synonym: RPB_2049
Alternate gene names: 86749171
Gene position: 2328025-2328765 (Clockwise)
Preceding gene: 86749170
Following gene: 86749172
Centisome position: 43.66
GC content: 67.07
Gene sequence:
>741_bases ATGAGTATGCCCGAGACGGCCACGGCGCGCCCCGCGGTGCTCGACGTCAAGGGACTATCCGCCGGCTGGGGACCGATGCG GGTGATCCACGACCTCGATCTCACCGTCTTCGCCGGCGAGCGGATCGGTCTGGTCGGCCTCAACGGCCACGGCAAGTCGA CGTTGTTTCAGGCGATCGCCGGGCTCACCGGCTGGCAGCGCGGATCGATCAAGCTCAACGGCTATGAGGTCGGCCGCACC CGCAGCCAGGGGCCGGGCCGCTACACGCATCTAATTGTGCGGAGAGGTCTGGCGCTGATCCCGCAGGGCGATGAGATCTT TCACGGCCTGACGGTCGAGGAGCATCTCGACAGCGGCGCCTTCACCAAGAGCGCCTGGGCCGAGCGCGGCATCCGCAAGA AGCGAATTCTGCAGATCTTCCCGCCGCTGGAGAAGCTGATGAAGATTCCGGTGGGCCGCCTGTCGGGCGGCGAGCGACGG ATGGTGTCGATCGGCCGCGGCCTGATGTCCGACGCCGAACTGTTCCTGGTCGACGAGCCGTCGCTCGGGCTGGCGCCGAA GATCGGCCGCTCGGTGGTCGATGCCTTGATGGCGGTCGAGCTCGGCGGCTCGGCGATGGTGATCGCCGAACAGAACGTCG CGCTGCTCGAAGGCAGCGTCGATCGCATCATCGGAATGCACGCCGGCAAGCTGAAGGGCGAGGCCTCGGCCTCCAAGTCC ATGTCGACGGAGCGCAGCTGA
Upstream 100 bases:
>100_bases CCGGCGAGACGATCGCCGAAGGATCGCTTGCGGAGATCCTGCTCAACCCGCGCGTCAAGGCTGCGTATTTCGAGACCGAT GCCGGCGGGGGGCTGCATTG
Downstream 100 bases:
>100_bases TGAATTGGGGTTTCATCGTCACCAACGCGATCACGCTGGCCTGCATCTACGGGACGCTGGCGATCGGGATTTCGGTCACC TGGTCGAGCCTCGGCCTGGT
Product: ABC transporter related
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSMPETATARPAVLDVKGLSAGWGPMRVIHDLDLTVFAGERIGLVGLNGHGKSTLFQAIAGLTGWQRGSIKLNGYEVGRT RSQGPGRYTHLIVRRGLALIPQGDEIFHGLTVEEHLDSGAFTKSAWAERGIRKKRILQIFPPLEKLMKIPVGRLSGGERR MVSIGRGLMSDAELFLVDEPSLGLAPKIGRSVVDALMAVELGGSAMVIAEQNVALLEGSVDRIIGMHAGKLKGEASASKS MSTERS
Sequences:
>Translated_246_residues MSMPETATARPAVLDVKGLSAGWGPMRVIHDLDLTVFAGERIGLVGLNGHGKSTLFQAIAGLTGWQRGSIKLNGYEVGRT RSQGPGRYTHLIVRRGLALIPQGDEIFHGLTVEEHLDSGAFTKSAWAERGIRKKRILQIFPPLEKLMKIPVGRLSGGERR MVSIGRGLMSDAELFLVDEPSLGLAPKIGRSVVDALMAVELGGSAMVIAEQNVALLEGSVDRIIGMHAGKLKGEASASKS MSTERS >Mature_245_residues SMPETATARPAVLDVKGLSAGWGPMRVIHDLDLTVFAGERIGLVGLNGHGKSTLFQAIAGLTGWQRGSIKLNGYEVGRTR SQGPGRYTHLIVRRGLALIPQGDEIFHGLTVEEHLDSGAFTKSAWAERGIRKKRILQIFPPLEKLMKIPVGRLSGGERRM VSIGRGLMSDAELFLVDEPSLGLAPKIGRSVVDALMAVELGGSAMVIAEQNVALLEGSVDRIIGMHAGKLKGEASASKSM STERS
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0410
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI150417984, Length=213, Percent_Identity=28.6384976525822, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI47078218, Length=212, Percent_Identity=27.8301886792453, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI116734710, Length=210, Percent_Identity=30, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI45446740, Length=210, Percent_Identity=27.6190476190476, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI31657092, Length=212, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI27881501, Length=220, Percent_Identity=26.8181818181818, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI30795238, Length=220, Percent_Identity=26.8181818181818, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI27436953, Length=210, Percent_Identity=27.6190476190476, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI89111135, Length=228, Percent_Identity=25.4385964912281, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI153792144, Length=228, Percent_Identity=24.5614035087719, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI105990541, Length=200, Percent_Identity=25.5, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI27262624, Length=161, Percent_Identity=26.7080745341615, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI27262626, Length=161, Percent_Identity=26.7080745341615, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI21536376, Length=200, Percent_Identity=26.5, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI87082268, Length=203, Percent_Identity=34.4827586206897, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1789672, Length=241, Percent_Identity=25.7261410788382, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789593, Length=238, Percent_Identity=29.8319327731092, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787029, Length=221, Percent_Identity=26.2443438914027, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082267, Length=180, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790467, Length=224, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788225, Length=235, Percent_Identity=25.9574468085106, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787089, Length=239, Percent_Identity=25.1046025104602, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1790190, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790544, Length=246, Percent_Identity=28.8617886178862, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994943, Length=234, Percent_Identity=25.6410256410256, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787792, Length=229, Percent_Identity=27.0742358078603, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786872, Length=225, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790525, Length=220, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI87081791, Length=232, Percent_Identity=29.3103448275862, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1788897, Length=235, Percent_Identity=26.3829787234043, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787370, Length=230, Percent_Identity=27.8260869565217, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1787105, Length=216, Percent_Identity=25, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1789991, Length=244, Percent_Identity=24.1803278688525, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI87081782, Length=241, Percent_Identity=30.2904564315353, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786563, Length=170, Percent_Identity=31.7647058823529, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788761, Length=229, Percent_Identity=24.0174672489083, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI87081834, Length=211, Percent_Identity=27.4881516587678, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1786253, Length=228, Percent_Identity=27.6315789473684, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71983523, Length=232, Percent_Identity=30.6034482758621, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71983516, Length=232, Percent_Identity=30.6034482758621, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71983510, Length=232, Percent_Identity=30.6034482758621, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17565586, Length=165, Percent_Identity=31.5151515151515, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71988343, Length=177, Percent_Identity=28.8135593220339, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115533608, Length=226, Percent_Identity=26.5486725663717, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24666092, Length=226, Percent_Identity=26.5486725663717, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24648314, Length=218, Percent_Identity=27.5229357798165, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24650853, Length=222, Percent_Identity=29.2792792792793, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24650855, Length=222, Percent_Identity=29.2792792792793, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI281362751, Length=226, Percent_Identity=28.3185840707965, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24643674, Length=232, Percent_Identity=26.7241379310345, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221512771, Length=237, Percent_Identity=25.7383966244726, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582014, Length=224, Percent_Identity=28.125, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24582012, Length=224, Percent_Identity=28.125, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI85725262, Length=247, Percent_Identity=29.1497975708502, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26316; Mature: 26185
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPETATARPAVLDVKGLSAGWGPMRVIHDLDLTVFAGERIGLVGLNGHGKSTLFQAIA CCCCCCCCCCCEEEEECCCCCCCCHHEEEEECCEEEEECCEEEEEEECCCCHHHHHHHHH GLTGWQRGSIKLNGYEVGRTRSQGPGRYTHLIVRRGLALIPQGDEIFHGLTVEEHLDSGA HCCCCCCCCEEECCEEECCCCCCCCCHHHHHHHHCCEEECCCCCHHHCCCCHHHHCCCCC FTKSAWAERGIRKKRILQIFPPLEKLMKIPVGRLSGGERRMVSIGRGLMSDAELFLVDEP CHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECC SLGLAPKIGRSVVDALMAVELGGSAMVIAEQNVALLEGSVDRIIGMHAGKLKGEASASKS CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHHCCCCCCCCCCHHHHC MSTERS CCCCCC >Mature Secondary Structure SMPETATARPAVLDVKGLSAGWGPMRVIHDLDLTVFAGERIGLVGLNGHGKSTLFQAIA CCCCCCCCCCEEEEECCCCCCCCHHEEEEECCEEEEECCEEEEEEECCCCHHHHHHHHH GLTGWQRGSIKLNGYEVGRTRSQGPGRYTHLIVRRGLALIPQGDEIFHGLTVEEHLDSGA HCCCCCCCCEEECCEEECCCCCCCCCHHHHHHHHCCEEECCCCCHHHCCCCHHHHCCCCC FTKSAWAERGIRKKRILQIFPPLEKLMKIPVGRLSGGERRMVSIGRGLMSDAELFLVDEP CHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECC SLGLAPKIGRSVVDALMAVELGGSAMVIAEQNVALLEGSVDRIIGMHAGKLKGEASASKS CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHHCCCCCCCCCCHHHHC MSTERS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]