Click here to switch to the map view.

The map label for this gene is 86749123

Identifier: 86749123

GI number: 86749123

Start: 2272021

End: 2273340

Strand: Direct

Name: 86749123

Synonym: RPB_2000

Alternate gene names: NA

Gene position: 2272021-2273340 (Clockwise)

Preceding gene: 86749121

Following gene: 86749124

Centisome position: 42.61

GC content: 68.94

Gene sequence:

>1320_bases
TTGCAACGACAATTCGCGCCGCGATTGCGGCAATTGCACTGGTACGAGATCGCGCTGATCGCCGCCGTCGCGCTGGCGCT
CTGCATCTATCTGCCGATCGTGGTGAAGCGCTCGGCGGTGCACGGGTTCGGCGACGTCCAGGTGTTCTTCCGCGCCGGCT
GGGCGGTGTGGACAGGCTATCCCCTGTATGAAGTCGCCGATCATCACGGCTGGACCTATCACTACCCGCCGTTCTTCGCG
TTGCTGATGGGGCCGTTCGCCTATCCGCTCGACGGCTATCCCAAACCGGCCTGGGCGCTGCCGCTGCCGATGTCGGTCGC
GGTGTGGTACGCGCTCAGCGCCGCCGCCGTGCTGATCGCGATCGACTGGTGGGCGAGGGCGCTCGAACGCGGCGCTCCGC
CTCTGCTCCAGGAGGCCGGCTGGAACGGGTGGTGGATGCTGCGGATCGGGCCGCTGGCGACGCTGCTGCCGTTCATCGGC
GACGGTTTCGGCCGCGGGCAGCCGAGCGCGCTGGTGCTGCTGACGATGGTGGCGTTCCTCGTGCTTTACGTGCAGGGCCG
GATCTATGCGGCGGCGTGCGCGCTGGCGATCGGCTTCACCATCAAGCTGTTTCCGATCGCGCTGCTGCTGTTTCCGATAC
TGCGGCGGGACGTGAAAACGGTGCTGGCCACCGCCGGCTTCAGTCTCGTCTTCCTGTTCGTCGTGCCGACGCTGTGCCTC
GGGCCGGCCGAAGTGATCAAACTCTACACCGCGATGTGGACCGAGCATCTCAACGGCATCCTCACCGGCGTGCCGAACGC
CAAGATTGCCGCCGAAATCACCTTCACCTCGTACGACATGCTGAGCATCGCCGCGATGCTGGCGCGGATCGGCGCTGGCG
GCCTGCCCGCGGCCGACACGCTGCCGGGATTCGCCACCGCGGGACAGATGGCCTTCAACGCCGCGTTCGCGGCCGCGCTT
CTGTGGATCGGCCACGGCCGGTTCTGGCGCCTGACCGGGCCGCAACCGCCGCCGTCCGAAGCGCTGCTGATCGGCGGCGC
CATCCTGTGCGCCGCGCTGCCGGTGATGCTGTCGGTGTCGCAGCCGAACTACGTGGCGTTCGTCGCGCCGTTGGTCGCAG
TGGTGCAGGTCGACGCGTGGCGACGCAGCGGCGAGGTCAGGGTGGTGCCGCTGCTGATCGCCTGGGCCGGCGTGATGTGG
CTCGGCATGGTCGCGACCGAAGGCGGGGTCTGGCAGCCGCTGCGCGTGATCGGGCTGGCGACGCCGGCGATCGTGGCGCT
GCTCGGCTGGGGCCTCGTCTGCCTGCGGCGGGCGCGATAG

Upstream 100 bases:

>100_bases
GGGCTCTCTCGTCCCCGACGTACACGGCCAGCAACACACTCGCCATGGTTCCGCCCCGCAGGGGTGCAAATCACGCCCAG
GATTCGACCGGAGCGTCTCG

Downstream 100 bases:

>100_bases
CGGCGGCTTCTCCGAATCAGCCAAATCGGGGAGATTGCGCCCGCGCCGGCCCGCGCGTTTCACGGACCATTCGATCGAGC
AGGGACCCGCGCGGCGGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MQRQFAPRLRQLHWYEIALIAAVALALCIYLPIVVKRSAVHGFGDVQVFFRAGWAVWTGYPLYEVADHHGWTYHYPPFFA
LLMGPFAYPLDGYPKPAWALPLPMSVAVWYALSAAAVLIAIDWWARALERGAPPLLQEAGWNGWWMLRIGPLATLLPFIG
DGFGRGQPSALVLLTMVAFLVLYVQGRIYAAACALAIGFTIKLFPIALLLFPILRRDVKTVLATAGFSLVFLFVVPTLCL
GPAEVIKLYTAMWTEHLNGILTGVPNAKIAAEITFTSYDMLSIAAMLARIGAGGLPAADTLPGFATAGQMAFNAAFAAAL
LWIGHGRFWRLTGPQPPPSEALLIGGAILCAALPVMLSVSQPNYVAFVAPLVAVVQVDAWRRSGEVRVVPLLIAWAGVMW
LGMVATEGGVWQPLRVIGLATPAIVALLGWGLVCLRRAR

Sequences:

>Translated_439_residues
MQRQFAPRLRQLHWYEIALIAAVALALCIYLPIVVKRSAVHGFGDVQVFFRAGWAVWTGYPLYEVADHHGWTYHYPPFFA
LLMGPFAYPLDGYPKPAWALPLPMSVAVWYALSAAAVLIAIDWWARALERGAPPLLQEAGWNGWWMLRIGPLATLLPFIG
DGFGRGQPSALVLLTMVAFLVLYVQGRIYAAACALAIGFTIKLFPIALLLFPILRRDVKTVLATAGFSLVFLFVVPTLCL
GPAEVIKLYTAMWTEHLNGILTGVPNAKIAAEITFTSYDMLSIAAMLARIGAGGLPAADTLPGFATAGQMAFNAAFAAAL
LWIGHGRFWRLTGPQPPPSEALLIGGAILCAALPVMLSVSQPNYVAFVAPLVAVVQVDAWRRSGEVRVVPLLIAWAGVMW
LGMVATEGGVWQPLRVIGLATPAIVALLGWGLVCLRRAR
>Mature_439_residues
MQRQFAPRLRQLHWYEIALIAAVALALCIYLPIVVKRSAVHGFGDVQVFFRAGWAVWTGYPLYEVADHHGWTYHYPPFFA
LLMGPFAYPLDGYPKPAWALPLPMSVAVWYALSAAAVLIAIDWWARALERGAPPLLQEAGWNGWWMLRIGPLATLLPFIG
DGFGRGQPSALVLLTMVAFLVLYVQGRIYAAACALAIGFTIKLFPIALLLFPILRRDVKTVLATAGFSLVFLFVVPTLCL
GPAEVIKLYTAMWTEHLNGILTGVPNAKIAAEITFTSYDMLSIAAMLARIGAGGLPAADTLPGFATAGQMAFNAAFAAAL
LWIGHGRFWRLTGPQPPPSEALLIGGAILCAALPVMLSVSQPNYVAFVAPLVAVVQVDAWRRSGEVRVVPLLIAWAGVMW
LGMVATEGGVWQPLRVIGLATPAIVALLGWGLVCLRRAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47592; Mature: 47592

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRQFAPRLRQLHWYEIALIAAVALALCIYLPIVVKRSAVHGFGDVQVFFRAGWAVWTGY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCC
PLYEVADHHGWTYHYPPFFALLMGPFAYPLDGYPKPAWALPLPMSVAVWYALSAAAVLIA
CHHHHHCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
IDWWARALERGAPPLLQEAGWNGWWMLRIGPLATLLPFIGDGFGRGQPSALVLLTMVAFL
HHHHHHHHHHCCCCHHHHCCCCCEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
VLYVQGRIYAAACALAIGFTIKLFPIALLLFPILRRDVKTVLATAGFSLVFLFVVPTLCL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GPAEVIKLYTAMWTEHLNGILTGVPNAKIAAEITFTSYDMLSIAAMLARIGAGGLPAADT
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCC
LPGFATAGQMAFNAAFAAALLWIGHGRFWRLTGPQPPPSEALLIGGAILCAALPVMLSVS
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHEECC
QPNYVAFVAPLVAVVQVDAWRRSGEVRVVPLLIAWAGVMWLGMVATEGGVWQPLRVIGLA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TPAIVALLGWGLVCLRRAR
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQRQFAPRLRQLHWYEIALIAAVALALCIYLPIVVKRSAVHGFGDVQVFFRAGWAVWTGY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCC
PLYEVADHHGWTYHYPPFFALLMGPFAYPLDGYPKPAWALPLPMSVAVWYALSAAAVLIA
CHHHHHCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
IDWWARALERGAPPLLQEAGWNGWWMLRIGPLATLLPFIGDGFGRGQPSALVLLTMVAFL
HHHHHHHHHHCCCCHHHHCCCCCEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
VLYVQGRIYAAACALAIGFTIKLFPIALLLFPILRRDVKTVLATAGFSLVFLFVVPTLCL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GPAEVIKLYTAMWTEHLNGILTGVPNAKIAAEITFTSYDMLSIAAMLARIGAGGLPAADT
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCC
LPGFATAGQMAFNAAFAAALLWIGHGRFWRLTGPQPPPSEALLIGGAILCAALPVMLSVS
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHEECC
QPNYVAFVAPLVAVVQVDAWRRSGEVRVVPLLIAWAGVMWLGMVATEGGVWQPLRVIGLA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TPAIVALLGWGLVCLRRAR
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA