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The map label for this gene is ybgF [C]

Identifier: 86748939

GI number: 86748939

Start: 2077411

End: 2078376

Strand: Direct

Name: ybgF [C]

Synonym: RPB_1816

Alternate gene names: 86748939

Gene position: 2077411-2078376 (Clockwise)

Preceding gene: 86748938

Following gene: 86748940

Centisome position: 38.96

GC content: 69.46

Gene sequence:

>966_bases
ATGTCACCCATTCATGCCCTTTCTGCGCGCAGCCTCGCGGTGTTCGCGATGCTCGCTTTCGCCGCTCCCGCGCTGGCCCA
GCAATATGGCGGCGAGGTCGATCCCGAAATCCGCATCCAGCAGCTCGAAGAGCGGTTGCGCACGCTGACCGGGCAGAACG
AGGAGCTGCAGTATCGCAACCGCCGGCTGGAAGATCAGGTCCGGCAATTGCAAAGCGGTGCAGGGGTTCAGCCGGCCGCA
CCCGGCAACGCCGCGCCGCCGCCGGCTGCCGCTGCGCAGCAACCTTCTGTCTACGGCCAGCCGCCGCAGGCACCGATCGT
GCAGGATCAGCCGGTGGCGCCGCCGGCGACCGGCCGCCGCCGGGGCGATGCGTTCGATCCGAGCCAGAACCCGAACGCGC
CCGGCGTGCCGCGGGCGCTCGGCGGCGGACAATTGCCGGTCCCGGCCGAGCAAAGCGGGGTGGCGGGCGCGCCGCTCGAC
CTGTCGAACAATTCGGGCGGTCGCTATCCCGACGCCGGCGCGCCGCCGCAACCGGCGCCGAGCGCTGCGGCCGGGGGCGG
GCTGACGACGCTGCCGCCATCGGCCAGCCCGCGCGACGAGTTCGATCTCGGCATCGGCTACATGCAGCGCCGCGACTACG
CGCTCGCCGAGGAGACGATGCGCAACTTCGCCAGCAAATATCCCAACGACGCCCTGACGCCGGACTCGCAATACTGGCTC
GGCGAGAGCTTCTTCCAGCGCCAGATGTATCGCGACGCGGCGGAAGCCTTCCTCGCGGTCACCAGCAAATACGACAAGTC
GGCGAAGGCGCCCGATGCGCTGCTGCGGCTCGGCCAGTCGCTGTCGGCGCTGAAGGAAAAGGAAGCCGCCTGCGCCGCGC
TGGGCGAGATCGGCCGCAAATATCCGAAGGCATCGGCCGGCGTGAAGAAGGCGGTCGACACCGAGCAGAAGAAGCTTAAG
TGCTAG

Upstream 100 bases:

>100_bases
CTGCGACCGTCCGCCGTTCCGCCAGTCACATTTTTGGCGTAGTCCAGCGGTCAATCCGGCGCTACTAATCTGGCGCGCCA
TCCCCAACCGTCGGGCCCCG

Downstream 100 bases:

>100_bases
GCTGACGAGAGCCCCGGCCGCGCCGGGCTCGATTCGAGGCTTGCGCTGCCGATGTCCGGGACTGACGAAGCGCCGATTTC
GGCGCGCGAGGCTTCGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: L-Pal System YbgF; TPR Repeat-Containing Protein; TPR Repeat Protein; L System Periplasmic Component YbgF; Tetratricopeptide TPR2 Protein

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSPIHALSARSLAVFAMLAFAAPALAQQYGGEVDPEIRIQQLEERLRTLTGQNEELQYRNRRLEDQVRQLQSGAGVQPAA
PGNAAPPPAAAAQQPSVYGQPPQAPIVQDQPVAPPATGRRRGDAFDPSQNPNAPGVPRALGGGQLPVPAEQSGVAGAPLD
LSNNSGGRYPDAGAPPQPAPSAAAGGGLTTLPPSASPRDEFDLGIGYMQRRDYALAEETMRNFASKYPNDALTPDSQYWL
GESFFQRQMYRDAAEAFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKASAGVKKAVDTEQKKLK
C

Sequences:

>Translated_321_residues
MSPIHALSARSLAVFAMLAFAAPALAQQYGGEVDPEIRIQQLEERLRTLTGQNEELQYRNRRLEDQVRQLQSGAGVQPAA
PGNAAPPPAAAAQQPSVYGQPPQAPIVQDQPVAPPATGRRRGDAFDPSQNPNAPGVPRALGGGQLPVPAEQSGVAGAPLD
LSNNSGGRYPDAGAPPQPAPSAAAGGGLTTLPPSASPRDEFDLGIGYMQRRDYALAEETMRNFASKYPNDALTPDSQYWL
GESFFQRQMYRDAAEAFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKASAGVKKAVDTEQKKLK
C
>Mature_320_residues
SPIHALSARSLAVFAMLAFAAPALAQQYGGEVDPEIRIQQLEERLRTLTGQNEELQYRNRRLEDQVRQLQSGAGVQPAAP
GNAAPPPAAAAQQPSVYGQPPQAPIVQDQPVAPPATGRRRGDAFDPSQNPNAPGVPRALGGGQLPVPAEQSGVAGAPLDL
SNNSGGRYPDAGAPPQPAPSAAAGGGLTTLPPSASPRDEFDLGIGYMQRRDYALAEETMRNFASKYPNDALTPDSQYWLG
ESFFQRQMYRDAAEAFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPKASAGVKKAVDTEQKKLKC

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33971; Mature: 33840

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIHALSARSLAVFAMLAFAAPALAQQYGGEVDPEIRIQQLEERLRTLTGQNEELQYRN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
RRLEDQVRQLQSGAGVQPAAPGNAAPPPAAAAQQPSVYGQPPQAPIVQDQPVAPPATGRR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGDAFDPSQNPNAPGVPRALGGGQLPVPAEQSGVAGAPLDLSNNSGGRYPDAGAPPQPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAAAGGGLTTLPPSASPRDEFDLGIGYMQRRDYALAEETMRNFASKYPNDALTPDSQYWL
CCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
GESFFQRQMYRDAAEAFLAVTSKYDKSAKAPDALLRLGQSLSALKEKEAACAALGEIGRK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPKASAGVKKAVDTEQKKLKC
CCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPIHALSARSLAVFAMLAFAAPALAQQYGGEVDPEIRIQQLEERLRTLTGQNEELQYRN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH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CCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA