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The map label for this gene is omp16 [H]

Identifier: 86748938

GI number: 86748938

Start: 2076745

End: 2077242

Strand: Direct

Name: omp16 [H]

Synonym: RPB_1815

Alternate gene names: 86748938

Gene position: 2076745-2077242 (Clockwise)

Preceding gene: 86748937

Following gene: 86748939

Centisome position: 38.95

GC content: 65.86

Gene sequence:

>498_bases
ATGACACATCAGAAGCGAATCCTCCAGGGATTGAAGCTGGCCGCGGTGCTCGCGGTGGCCCTGTCGATGGGGGCTTGCGC
CAATAACAAGACGGGTCTCGGTGCCGACGGCGCGATGGCCAGCGCGGCGAGCCCGGGAAGCCAGCAGGATTTCGTGGTCA
ATGTCGGCGATCGCGTGTTCTTCGAAAGCGATCAGACCGATCTGTCGCCGCAGGCGATCGCGACGCTCGACAAGCAGGCC
CAGTGGCTGCAGAGCTACAACCGGTACTCGTTCACGATCGAGGGCCATGCCGACGAGCGCGGCACCCGCGAGTACAACAT
CGCGCTGGGCGCGCGTCGTGCGCAGTCGGTCCGCAACTATCTCGCCTCGCGCGGGATCGACCCGTCGCGGATGCGGACGA
TTTCCTACGGCAAGGAACGTCCGGTCGCGGTCTGCAACGACATCTCGTGCTGGTCGCAGAACCGCCGCGCGGTGACGGTC
CTCAACGCCGGCGCCTGA

Upstream 100 bases:

>100_bases
GGAGCCGGCAAGGTCTCGTCAAGGTTGACGGAACGTTCGCTTAACCATCGCCCTGTAGACCGGATGACAGTCCGAATATC
GCGAGCGTGGAGGCTCCGGA

Downstream 100 bases:

>100_bases
GCGCGACCGCGTTCGAACAGATGCAACGGCGCCTTCGGGCGCCGTTTTTGCTTGTGATTGCGAGATGCCTGCGACCGTCC
GCCGTTCCGCCAGTCACATT

Product: OmpA/MotB

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTHQKRILQGLKLAAVLAVALSMGACANNKTGLGADGAMASAASPGSQQDFVVNVGDRVFFESDQTDLSPQAIATLDKQA
QWLQSYNRYSFTIEGHADERGTREYNIALGARRAQSVRNYLASRGIDPSRMRTISYGKERPVAVCNDISCWSQNRRAVTV
LNAGA

Sequences:

>Translated_165_residues
MTHQKRILQGLKLAAVLAVALSMGACANNKTGLGADGAMASAASPGSQQDFVVNVGDRVFFESDQTDLSPQAIATLDKQA
QWLQSYNRYSFTIEGHADERGTREYNIALGARRAQSVRNYLASRGIDPSRMRTISYGKERPVAVCNDISCWSQNRRAVTV
LNAGA
>Mature_164_residues
THQKRILQGLKLAAVLAVALSMGACANNKTGLGADGAMASAASPGSQQDFVVNVGDRVFFESDQTDLSPQAIATLDKQAQ
WLQSYNRYSFTIEGHADERGTREYNIALGARRAQSVRNYLASRGIDPSRMRTISYGKERPVAVCNDISCWSQNRRAVTVL
NAGA

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=172, Percent_Identity=37.2093023255814, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI48994946, Length=116, Percent_Identity=31.0344827586207, Blast_Score=66, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17882; Mature: 17751

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHQKRILQGLKLAAVLAVALSMGACANNKTGLGADGAMASAASPGSQQDFVVNVGDRVF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEE
FESDQTDLSPQAIATLDKQAQWLQSYNRYSFTIEGHADERGTREYNIALGARRAQSVRNY
EECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECHHHHHHHHHH
LASRGIDPSRMRTISYGKERPVAVCNDISCWSQNRRAVTVLNAGA
HHHCCCCHHHHEEECCCCCCCEEEECCCHHCCCCCCEEEEEECCC
>Mature Secondary Structure 
THQKRILQGLKLAAVLAVALSMGACANNKTGLGADGAMASAASPGSQQDFVVNVGDRVF
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEE
FESDQTDLSPQAIATLDKQAQWLQSYNRYSFTIEGHADERGTREYNIALGARRAQSVRNY
EECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECHHHHHHHHHH
LASRGIDPSRMRTISYGKERPVAVCNDISCWSQNRRAVTVLNAGA
HHHCCCCHHHHEEECCCCCCCEEEECCCHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]