| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is eutB [H]
Identifier: 86748840
GI number: 86748840
Start: 1956442
End: 1957824
Strand: Direct
Name: eutB [H]
Synonym: RPB_1717
Alternate gene names: 86748840
Gene position: 1956442-1957824 (Clockwise)
Preceding gene: 86748839
Following gene: 86748841
Centisome position: 36.69
GC content: 66.31
Gene sequence:
>1383_bases ATGCTCTATCGTCACGCTATCGGTAACGTCGCTTACGTCTTCGACAATCTGCGCGACCTGCTCGCCAGAGCCACGCCCCC TCGATCCGGTGACCGGCTCGCCGGCGTCGCCGCCGACAGTGCCGAGCAGATGGTCGCGGCGCGGATGGCGCTCGCCGAGG TGCCGCTGCGGCAATTTCTCAATGAGACCGTCATCCCCTATGAAGACGACGAGGTCACAAGGCTGATCGTCGACAGCCAC GACGCGCAAAGCTTTGCTCCGATTGCCGCGCTCACCGTCGGAGGTTTCCGCGACTGGCTGCTGTCGGATGCGGCGACGCC CGCGACGCTCGCCGCGATCGCGCGCGGCGTCACTCCCGAAATGGCCGCCGCGGTCAGCAAGCTGATGCGCAACCAGGATC TGATCCTGGTCGCCAAGAAGTGCAGCGTCGTCACCCGTTTCCGCAACACGATCGGCCTGCCGGGCCGGATGAGCGTGCGG TTGCAGCCCAATCACCCGTTCGACGATGTTCGCGGCATCACCGCCTCGACGCTGGACGGCCTGCTGCTCGGCGCCGGCGA TGCCTGTATCGGCATCAACCCGGCGAGCGACGATCCGGCGGTGCTTGGGCAATTGGTGCGGCTGCTCGACGACGTCATCA CGCGGCTGGCGATCCCCACCCAGAGTTGCGTGCTGACCCACGTCACCACCTCGCTGCGATTGATGGAGGAGGGAGTGCCC GTCGATCTGGTGTTCCAGTCGATTGCCGGCACCGAAGCCGCCAACCGCAGCTTCGGCATCGACCTGTCGATCCTGAAGGA GGCGCACGACGCCGGGCTCTCGTTGAAGCGGGGCACCGTCGGCGAAAATGTGATGTATTTCGAGACCGGGCAGGGCTCCG CGCTGTCGGCCGACGCCCATCACGGCGTCGATCAGCAGACCTGCGAGGCGCGAGCCTATGCGGTGGCGCGGGCCTATGCG CCGCTGCTGGTCAACAGCGTCGTCGGATTCATCGGCCCCGAATATCTCTACGACGGCAAGGAGATCATCCGCGCCGGGCT GGAGGACCATTTTTGCGGCAAGCTGCTAGGCCTGCCGCTCGGCGTCGACATCTGCTATACCAACCACGCCGAAGCCGACC AGGACGACATGGACACGCTGCTGACGCTGCTGGCCACCGCCGGCGTCAGCTTCATCATGGGCGTGCCCGGCGCCGACGAC GTCATGCTGAACTACCAGTCGACCTCGTTTCACGACGCGCTCTACGTCCGCGAACTTCTCGGTCTGAAGCGAGCCCCGGA GTTCGACGACTGGCTCGTTCGCACCGGGCTCTCCCAGGCCGACCTCCGTCTGACGGCCGCCGATGGGCGGCTGCCGGACT TCGCCGCCCGGCTGATCGCCTGA
Upstream 100 bases:
>100_bases AAAAATTTCTCGCAACCGTCCGGGTCGCTTAGCGTCCTGGTCGATGCTAGCTTGCATCTCGTGGGTGCCCGCAAATCCTG CGGGCCTCGACGGGAATGCC
Downstream 100 bases:
>100_bases GCCGCCGCTCGCATGCCCAGATCACCACCGAAGAATTCGGTGGCCGGGCGGATTTTGCCGTGATTAGATCGCCTTGACGC CTCGCAAACGGGATTGCTCG
Product: ethanolamine ammonia lyase large subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MLYRHAIGNVAYVFDNLRDLLARATPPRSGDRLAGVAADSAEQMVAARMALAEVPLRQFLNETVIPYEDDEVTRLIVDSH DAQSFAPIAALTVGGFRDWLLSDAATPATLAAIARGVTPEMAAAVSKLMRNQDLILVAKKCSVVTRFRNTIGLPGRMSVR LQPNHPFDDVRGITASTLDGLLLGAGDACIGINPASDDPAVLGQLVRLLDDVITRLAIPTQSCVLTHVTTSLRLMEEGVP VDLVFQSIAGTEAANRSFGIDLSILKEAHDAGLSLKRGTVGENVMYFETGQGSALSADAHHGVDQQTCEARAYAVARAYA PLLVNSVVGFIGPEYLYDGKEIIRAGLEDHFCGKLLGLPLGVDICYTNHAEADQDDMDTLLTLLATAGVSFIMGVPGADD VMLNYQSTSFHDALYVRELLGLKRAPEFDDWLVRTGLSQADLRLTAADGRLPDFAARLIA
Sequences:
>Translated_460_residues MLYRHAIGNVAYVFDNLRDLLARATPPRSGDRLAGVAADSAEQMVAARMALAEVPLRQFLNETVIPYEDDEVTRLIVDSH DAQSFAPIAALTVGGFRDWLLSDAATPATLAAIARGVTPEMAAAVSKLMRNQDLILVAKKCSVVTRFRNTIGLPGRMSVR LQPNHPFDDVRGITASTLDGLLLGAGDACIGINPASDDPAVLGQLVRLLDDVITRLAIPTQSCVLTHVTTSLRLMEEGVP VDLVFQSIAGTEAANRSFGIDLSILKEAHDAGLSLKRGTVGENVMYFETGQGSALSADAHHGVDQQTCEARAYAVARAYA PLLVNSVVGFIGPEYLYDGKEIIRAGLEDHFCGKLLGLPLGVDICYTNHAEADQDDMDTLLTLLATAGVSFIMGVPGADD VMLNYQSTSFHDALYVRELLGLKRAPEFDDWLVRTGLSQADLRLTAADGRLPDFAARLIA >Mature_460_residues MLYRHAIGNVAYVFDNLRDLLARATPPRSGDRLAGVAADSAEQMVAARMALAEVPLRQFLNETVIPYEDDEVTRLIVDSH DAQSFAPIAALTVGGFRDWLLSDAATPATLAAIARGVTPEMAAAVSKLMRNQDLILVAKKCSVVTRFRNTIGLPGRMSVR LQPNHPFDDVRGITASTLDGLLLGAGDACIGINPASDDPAVLGQLVRLLDDVITRLAIPTQSCVLTHVTTSLRLMEEGVP VDLVFQSIAGTEAANRSFGIDLSILKEAHDAGLSLKRGTVGENVMYFETGQGSALSADAHHGVDQQTCEARAYAVARAYA PLLVNSVVGFIGPEYLYDGKEIIRAGLEDHFCGKLLGLPLGVDICYTNHAEADQDDMDTLLTLLATAGVSFIMGVPGADD VMLNYQSTSFHDALYVRELLGLKRAPEFDDWLVRTGLSQADLRLTAADGRLPDFAARLIA
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=443, Percent_Identity=49.8871331828442, Blast_Score=434, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 49357; Mature: 49357
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRHAIGNVAYVFDNLRDLLARATPPRSGDRLAGVAADSAEQMVAARMALAEVPLRQFL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH NETVIPYEDDEVTRLIVDSHDAQSFAPIAALTVGGFRDWLLSDAATPATLAAIARGVTPE CCCCCCCCCCCCEEEEEECCCCCHHCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCHH MAAAVSKLMRNQDLILVAKKCSVVTRFRNTIGLPGRMSVRLQPNHPFDDVRGITASTLDG HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCHHHHHCC LLLGAGDACIGINPASDDPAVLGQLVRLLDDVITRLAIPTQSCVLTHVTTSLRLMEEGVP CEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC VDLVFQSIAGTEAANRSFGIDLSILKEAHDAGLSLKRGTVGENVMYFETGQGSALSADAH HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCEECCHHH HGVDQQTCEARAYAVARAYAPLLVNSVVGFIGPEYLYDGKEIIRAGLEDHFCGKLLGLPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCCC GVDICYTNHAEADQDDMDTLLTLLATAGVSFIMGVPGADDVMLNYQSTSFHDALYVRELL CEEEEECCCCCCCHHHHHHHHHHHHHHCHHHEECCCCCCCEEEEECCCCHHHHHHHHHHH GLKRAPEFDDWLVRTGLSQADLRLTAADGRLPDFAARLIA CCCCCCCHHHHHHHCCCCHHCEEEEECCCCCHHHHHHHCC >Mature Secondary Structure MLYRHAIGNVAYVFDNLRDLLARATPPRSGDRLAGVAADSAEQMVAARMALAEVPLRQFL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH NETVIPYEDDEVTRLIVDSHDAQSFAPIAALTVGGFRDWLLSDAATPATLAAIARGVTPE CCCCCCCCCCCCEEEEEECCCCCHHCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCHH MAAAVSKLMRNQDLILVAKKCSVVTRFRNTIGLPGRMSVRLQPNHPFDDVRGITASTLDG HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHCCCHHHHHCC LLLGAGDACIGINPASDDPAVLGQLVRLLDDVITRLAIPTQSCVLTHVTTSLRLMEEGVP CEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC VDLVFQSIAGTEAANRSFGIDLSILKEAHDAGLSLKRGTVGENVMYFETGQGSALSADAH HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCEECCHHH HGVDQQTCEARAYAVARAYAPLLVNSVVGFIGPEYLYDGKEIIRAGLEDHFCGKLLGLPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCCC GVDICYTNHAEADQDDMDTLLTLLATAGVSFIMGVPGADDVMLNYQSTSFHDALYVRELL CEEEEECCCCCCCHHHHHHHHHHHHHHCHHHEECCCCCCCEEEEECCCCHHHHHHHHHHH GLKRAPEFDDWLVRTGLSQADLRLTAADGRLPDFAARLIA CCCCCCCHHHHHHHCCCCHHCEEEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]