| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cysW [H]
Identifier: 86748521
GI number: 86748521
Start: 1587138
End: 1588004
Strand: Reverse
Name: cysW [H]
Synonym: RPB_1396
Alternate gene names: 86748521
Gene position: 1588004-1587138 (Counterclockwise)
Preceding gene: 86748522
Following gene: 86748520
Centisome position: 29.78
GC content: 66.67
Gene sequence:
>867_bases ATGGCGAAGCCGCAGCCCCCGATCAAGAGAGACTGGATGGTAACGCCGGTCGGCGCCGGGCCGGTCGCACGCTTCGTCGT GCTGAGCGTGGTCGCCGTGGTGACGCTGTTCATTCTGGTGGCGCCGCTGGCGGTGATCCTGAGTTCGGCCTTCGCGCAGG GCGTCGGCGTGTTCCTGCGCAATCTCGGCGATCCCGGCACGCTGCACGCGATGTGGCTGACCACGATCACCGCGCTGATC GCGGTACCGGTGAACATCCTGTTCGGGCTCGCTGCGGCCTGGACCGTGACCAAGTTCGAATTCCCCGGCCGCACACTGCT GATCGCGCTGATCGAGCTGCCCTATTCGATCTCGCCGATCGTCGCCGGCGTCGCCTATCTGTTCGTCTACGGCTCGCAGG GGCTGTTCGGGCCGCTGCTGGAACAGCTCGACATCAAGGTGATGTTCGCGCTGCCGGGCATCGTGCTCGCCAGCATGTTC GTCACCGCGCCCTATGTCGCCCGCGAGTTGATCCCGCTGATGCAGGTGCAGGGCACCGACGAGGAAGAGGCAGCGGTGAC GCTCGGCGCCGGCGGCTTCGCCACCTTCCTGCGCGTCACGCTGCCGAATATCCGCTGGGCGGTGCTGTACGGCGCGATCC TATGCAACGCCCGGGTGCTGGGCGAATTCGGCGCGGTGTCGGTGGTGTCCGGCAACGTCCGCGGCCAGACCACGACGCTG CCGCTGCAGATCGAACTGCTGTACCAGGACTATAATGTCGCAGGCGCGTTCGCCGCCGCGACCACATTGACGGCGGTGGC GGTGGTCACCATCCTGCTGAAAATGCTGCTGGAGCGGCTGGCCGGCGACGAGCATCCTTCGGCTTAG
Upstream 100 bases:
>100_bases CGATCGCGGTGGTGATGCTGGTGATGGCGTTCGCGATGCTGCTCGTGACCAATGCGGTGCAGGCCTGGCAATTGCGCTAT CTCGGACGGGGTGACAGGTG
Downstream 100 bases:
>100_bases GTCGCGGCTGGCGCGAGGGGCCTTCCAATGCGCTCCGCTTTGGCGCTAAAAGAGGCACCCCCGAGGCCGCCATCCGCGGT CGTCGGCTCATTTTGACCCC
Product: sulfate ABC transporter, permease protein CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MAKPQPPIKRDWMVTPVGAGPVARFVVLSVVAVVTLFILVAPLAVILSSAFAQGVGVFLRNLGDPGTLHAMWLTTITALI AVPVNILFGLAAAWTVTKFEFPGRTLLIALIELPYSISPIVAGVAYLFVYGSQGLFGPLLEQLDIKVMFALPGIVLASMF VTAPYVARELIPLMQVQGTDEEEAAVTLGAGGFATFLRVTLPNIRWAVLYGAILCNARVLGEFGAVSVVSGNVRGQTTTL PLQIELLYQDYNVAGAFAAATTLTAVAVVTILLKMLLERLAGDEHPSA
Sequences:
>Translated_288_residues MAKPQPPIKRDWMVTPVGAGPVARFVVLSVVAVVTLFILVAPLAVILSSAFAQGVGVFLRNLGDPGTLHAMWLTTITALI AVPVNILFGLAAAWTVTKFEFPGRTLLIALIELPYSISPIVAGVAYLFVYGSQGLFGPLLEQLDIKVMFALPGIVLASMF VTAPYVARELIPLMQVQGTDEEEAAVTLGAGGFATFLRVTLPNIRWAVLYGAILCNARVLGEFGAVSVVSGNVRGQTTTL PLQIELLYQDYNVAGAFAAATTLTAVAVVTILLKMLLERLAGDEHPSA >Mature_287_residues AKPQPPIKRDWMVTPVGAGPVARFVVLSVVAVVTLFILVAPLAVILSSAFAQGVGVFLRNLGDPGTLHAMWLTTITALIA VPVNILFGLAAAWTVTKFEFPGRTLLIALIELPYSISPIVAGVAYLFVYGSQGLFGPLLEQLDIKVMFALPGIVLASMFV TAPYVARELIPLMQVQGTDEEEAAVTLGAGGFATFLRVTLPNIRWAVLYGAILCNARVLGEFGAVSVVSGNVRGQTTTLP LQIELLYQDYNVAGAFAAATTLTAVAVVTILLKMLLERLAGDEHPSA
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=270, Percent_Identity=52.5925925925926, Blast_Score=296, Evalue=1e-81, Organism=Escherichia coli, GI1788764, Length=200, Percent_Identity=37, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1786980, Length=225, Percent_Identity=31.1111111111111, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30505; Mature: 30373
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPQPPIKRDWMVTPVGAGPVARFVVLSVVAVVTLFILVAPLAVILSSAFAQGVGVFLR CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLGDPGTLHAMWLTTITALIAVPVNILFGLAAAWTVTKFEFPGRTLLIALIELPYSISPI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCHHHH VAGVAYLFVYGSQGLFGPLLEQLDIKVMFALPGIVLASMFVTAPYVARELIPLMQVQGTD HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EEEAAVTLGAGGFATFLRVTLPNIRWAVLYGAILCNARVLGEFGAVSVVSGNVRGQTTTL CCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEE PLQIELLYQDYNVAGAFAAATTLTAVAVVTILLKMLLERLAGDEHPSA EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AKPQPPIKRDWMVTPVGAGPVARFVVLSVVAVVTLFILVAPLAVILSSAFAQGVGVFLR CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLGDPGTLHAMWLTTITALIAVPVNILFGLAAAWTVTKFEFPGRTLLIALIELPYSISPI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCHHHH VAGVAYLFVYGSQGLFGPLLEQLDIKVMFALPGIVLASMFVTAPYVARELIPLMQVQGTD HHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EEEAAVTLGAGGFATFLRVTLPNIRWAVLYGAILCNARVLGEFGAVSVVSGNVRGQTTTL CCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEE PLQIELLYQDYNVAGAFAAATTLTAVAVVTILLKMLLERLAGDEHPSA EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]