| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is menB [C]
Identifier: 86748365
GI number: 86748365
Start: 1419324
End: 1420172
Strand: Reverse
Name: menB [C]
Synonym: RPB_1240
Alternate gene names: 86748365
Gene position: 1420172-1419324 (Counterclockwise)
Preceding gene: 86748369
Following gene: 86748364
Centisome position: 26.64
GC content: 65.14
Gene sequence:
>849_bases ATGGGCGGCTTCGAGACCCTCGTGGTCGAACGTCCCGATCCGGCGATCGCGCGGATCGTGATGAACCGGCCGGAAGCGCG CAACGCGCAGAACCTGCAGATGACCTACGACCTCAACGCCGCGTTCGACGACGCGGTGCAGGACGATGCCGTGAAGGTCA TCATTCTCGCCGGCTCCGGCCCGCATTTCTCCGCCGGTCACGACCTGCGCGCCACCACCAAGAACGAAGCCGGCATCGAC TTCCCGCCGGTCGGCCATTGGGGCGGCTTCCGCGAGCCCGGCGCTCACGGACGGATGGCGCGCGAGCAGGAAATTTATCT GCAGATCACGCGGCGCTGGCGCAATCTCGCCAAGCCGACCATCGCCGAAGTGCACGGCAAGTGCATCGCCGGCGGGCTGA TGCTGGCCTGGGCCTGCGACCTGATCGTCGCCGCCGACAATGCCGAGTTCTGCGACCCGGTGGTGACGATGGGCGTCTGC GGCGTCGAGTGGTTCGTGCATCCATGGGAGCTCGGCCCGCGCAAGGCCAAGGAACTGCTGTTCACCGCCGATAGCTGGAG TGCGCAAGACGCGCACCGGCTCGGCATGGTCAATCATGTGGTGGCCGCCGCCGAGCTATCCGCCTTCACCTTGAATCTGG CGCAGCGCATCGCCGCCAAGCCGAGCTTCGCGCTGAAGATGACCAAGGAAGCGGTCAACCGCTCGGTGGACATTCAGGGT CAGCCGGCCGCGATCGATCAGGCGTTCGCGCTGCATCAGCTTTGTCACGCACACAATCTGCAGGAGTTTGGAATGATCGT CGATCCGTCGGGACTGCATCCGTCGGTGCGCAAGCAAGTGAAGGTGTAA
Upstream 100 bases:
>100_bases GCCGCTGCAGATGACGTTTGCGGTCGCCGCAGCGACCTGCCAGACTACGCGCAACCACAACGGCGCGCATAAGCCGAAAC AACAAGAAAAGGGAGGATGC
Downstream 100 bases:
>100_bases GGCGATGGATCTCACGCCCAGTGACGAACAGCGGCTGCTGCGCGAAAGCGCCGACCGCTTCATCAACGAGACCTACACCA GCAAGCTGCGCGAGCAGAAC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MGGFETLVVERPDPAIARIVMNRPEARNAQNLQMTYDLNAAFDDAVQDDAVKVIILAGSGPHFSAGHDLRATTKNEAGID FPPVGHWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPTIAEVHGKCIAGGLMLAWACDLIVAADNAEFCDPVVTMGVC GVEWFVHPWELGPRKAKELLFTADSWSAQDAHRLGMVNHVVAAAELSAFTLNLAQRIAAKPSFALKMTKEAVNRSVDIQG QPAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV
Sequences:
>Translated_282_residues MGGFETLVVERPDPAIARIVMNRPEARNAQNLQMTYDLNAAFDDAVQDDAVKVIILAGSGPHFSAGHDLRATTKNEAGID FPPVGHWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPTIAEVHGKCIAGGLMLAWACDLIVAADNAEFCDPVVTMGVC GVEWFVHPWELGPRKAKELLFTADSWSAQDAHRLGMVNHVVAAAELSAFTLNLAQRIAAKPSFALKMTKEAVNRSVDIQG QPAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV >Mature_281_residues GGFETLVVERPDPAIARIVMNRPEARNAQNLQMTYDLNAAFDDAVQDDAVKVIILAGSGPHFSAGHDLRATTKNEAGIDF PPVGHWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPTIAEVHGKCIAGGLMLAWACDLIVAADNAEFCDPVVTMGVCG VEWFVHPWELGPRKAKELLFTADSWSAQDAHRLGMVNHVVAAAELSAFTLNLAQRIAAKPSFALKMTKEAVNRSVDIQGQ PAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=205, Percent_Identity=33.6585365853659, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI45643119, Length=234, Percent_Identity=29.0598290598291, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI260275230, Length=234, Percent_Identity=29.0598290598291, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI260274832, Length=234, Percent_Identity=29.0598290598291, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI194097323, Length=245, Percent_Identity=28.1632653061224, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1788597, Length=241, Percent_Identity=31.9502074688797, Blast_Score=104, Evalue=8e-24, Organism=Escherichia coli, GI221142681, Length=222, Percent_Identity=35.1351351351351, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1787659, Length=251, Percent_Identity=27.0916334661355, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1787660, Length=230, Percent_Identity=29.5652173913043, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI87082183, Length=220, Percent_Identity=31.8181818181818, Blast_Score=85, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17554946, Length=230, Percent_Identity=27.8260869565217, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17540714, Length=258, Percent_Identity=28.6821705426357, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI25145438, Length=226, Percent_Identity=28.7610619469027, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17535521, Length=218, Percent_Identity=25.6880733944954, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17536985, Length=236, Percent_Identity=26.6949152542373, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17540306, Length=204, Percent_Identity=29.4117647058824, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17549921, Length=237, Percent_Identity=24.4725738396624, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560910, Length=245, Percent_Identity=24.4897959183673, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17534483, Length=228, Percent_Identity=26.7543859649123, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI20129971, Length=229, Percent_Identity=27.9475982532751, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24653477, Length=229, Percent_Identity=27.9475982532751, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI19920382, Length=248, Percent_Identity=29.4354838709677, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI21357171, Length=244, Percent_Identity=28.6885245901639, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24650670, Length=247, Percent_Identity=29.1497975708502, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 30825; Mature: 30693
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGFETLVVERPDPAIARIVMNRPEARNAQNLQMTYDLNAAFDDAVQDDAVKVIILAGSG CCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCEEEEEEECCC PHFSAGHDLRATTKNEAGIDFPPVGHWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPT CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH IAEVHGKCIAGGLMLAWACDLIVAADNAEFCDPVVTMGVCGVEWFVHPWELGPRKAKELL HHHHCCHHHHHHHHHHHHHCEEEECCCCHHHCHHHHHHHHHHHHEECCCCCCHHHHHHEE FTADSWSAQDAHRLGMVNHVVAAAELSAFTLNLAQRIAAKPSFALKMTKEAVNRSVDIQG EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCC QPAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV CCHHHHHHHHHHHHHHHCCHHHCCEEECCCCCCHHHHHHCCC >Mature Secondary Structure GGFETLVVERPDPAIARIVMNRPEARNAQNLQMTYDLNAAFDDAVQDDAVKVIILAGSG CCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCEEEEEEECCC PHFSAGHDLRATTKNEAGIDFPPVGHWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPT CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH IAEVHGKCIAGGLMLAWACDLIVAADNAEFCDPVVTMGVCGVEWFVHPWELGPRKAKELL HHHHCCHHHHHHHHHHHHHCEEEECCCCHHHCHHHHHHHHHHHHEECCCCCCHHHHHHEE FTADSWSAQDAHRLGMVNHVVAAAELSAFTLNLAQRIAAKPSFALKMTKEAVNRSVDIQG EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCC QPAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV CCHHHHHHHHHHHHHHHCCHHHCCEEECCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA