Click here to switch to the map view.

The map label for this gene is 86747463

Identifier: 86747463

GI number: 86747463

Start: 382463

End: 383266

Strand: Reverse

Name: 86747463

Synonym: RPB_0337

Alternate gene names: NA

Gene position: 383266-382463 (Counterclockwise)

Preceding gene: 86747466

Following gene: 86747462

Centisome position: 7.19

GC content: 73.26

Gene sequence:

>804_bases
ATGGGTTCGAATCCGGCCTTCCGGGCCGCGCCGCCGCAGAGCCGGATCCACCCGGCGCTGCGCAGCTTCGCCGACGAATG
CCGCGAAACCGTGATGCGCATCCTGGCCTATGTGGGCGCGCTGGCGCTGATCGGGCTGATCATTTTCACCGCCGCCAATC
CGCTGACCGACGCCGCGATCACCGCCGCCACCACGCCCGGCGACCGGCCGGGCTGGAGCATGGCGACGCACTCGCATCCC
GCTTTCGCCGTCAGCCAGATCGACCTGCCCGGCGCCGTCGCGAGCACCGAAATCCTCCGGCATCCGGATGGCGGCCGCAA
GGATGTCCTGCGCTGGGCCGCCCCCGGGCAGGCGCCGGCCGTCGAGATCGAACTGTACCGCCTCGGCGACGAGGCGCACG
GCGTGCCGGACGCAGCGGCCGACCTCGCCGCCCGAATCGGTGCGGAGCGCGCCGAGAGCGCGCAGCCGGCCGGCCTGATC
GACAGCAAGTTCGGGCCGGTGACGCTGTTCGATCTCGCCGGGCCATCGACCCGCTGCCTCGGCTTCTTCAGGAGGATCGA
CGACGCGGCGCTGCGCATCTCCGGCTGGACCTGCCAGGGCGACAGCCTGCCGCAGCGGCGCGCCGCGGCCGCCTGCATGC
TGGACCGGCTGGTGCTGCTGACCGCCGGCGGCGATGCGGCTTTGGCCGACACCTTCGCCCACGCCGAACTGCGACGGCAG
GGCTGCACGCCGGCGCCTGGGCAGGCGGCCCGTGCCGACTGGGTGTTCGGCGCGCAGAATCCGCGTCTCCGCGGCGCATT
CTGA

Upstream 100 bases:

>100_bases
CGCTTCTATGCGAGAAACGCGGCCGACACAACTTGATACCTGCCCGCGCTTTTCCCTGCATTCTCAATCCTTCCGCGAGT
ATCGCCCGGAGTCTTTGCCG

Downstream 100 bases:

>100_bases
CAGCGAATCGCACGCGTCGTTTAACCGTTGGATTCCATGCAACATTCCGGCAAGCCCGGAATTGCATATTTGCGCTCGGT
GTGGCCGGATTGACCTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MGSNPAFRAAPPQSRIHPALRSFADECRETVMRILAYVGALALIGLIIFTAANPLTDAAITAATTPGDRPGWSMATHSHP
AFAVSQIDLPGAVASTEILRHPDGGRKDVLRWAAPGQAPAVEIELYRLGDEAHGVPDAAADLAARIGAERAESAQPAGLI
DSKFGPVTLFDLAGPSTRCLGFFRRIDDAALRISGWTCQGDSLPQRRAAAACMLDRLVLLTAGGDAALADTFAHAELRRQ
GCTPAPGQAARADWVFGAQNPRLRGAF

Sequences:

>Translated_267_residues
MGSNPAFRAAPPQSRIHPALRSFADECRETVMRILAYVGALALIGLIIFTAANPLTDAAITAATTPGDRPGWSMATHSHP
AFAVSQIDLPGAVASTEILRHPDGGRKDVLRWAAPGQAPAVEIELYRLGDEAHGVPDAAADLAARIGAERAESAQPAGLI
DSKFGPVTLFDLAGPSTRCLGFFRRIDDAALRISGWTCQGDSLPQRRAAAACMLDRLVLLTAGGDAALADTFAHAELRRQ
GCTPAPGQAARADWVFGAQNPRLRGAF
>Mature_266_residues
GSNPAFRAAPPQSRIHPALRSFADECRETVMRILAYVGALALIGLIIFTAANPLTDAAITAATTPGDRPGWSMATHSHPA
FAVSQIDLPGAVASTEILRHPDGGRKDVLRWAAPGQAPAVEIELYRLGDEAHGVPDAAADLAARIGAERAESAQPAGLID
SKFGPVTLFDLAGPSTRCLGFFRRIDDAALRISGWTCQGDSLPQRRAAAACMLDRLVLLTAGGDAALADTFAHAELRRQG
CTPAPGQAARADWVFGAQNPRLRGAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28065; Mature: 27934

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNPAFRAAPPQSRIHPALRSFADECRETVMRILAYVGALALIGLIIFTAANPLTDAAI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHE
TAATTPGDRPGWSMATHSHPAFAVSQIDLPGAVASTEILRHPDGGRKDVLRWAAPGQAPA
EEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCE
VEIELYRLGDEAHGVPDAAADLAARIGAERAESAQPAGLIDSKFGPVTLFDLAGPSTRCL
EEEEEEEECCHHCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHH
GFFRRIDDAALRISGWTCQGDSLPQRRAAAACMLDRLVLLTAGGDAALADTFAHAELRRQ
HHHHHHHHHHEEEECEEECCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHC
GCTPAPGQAARADWVFGAQNPRLRGAF
CCCCCCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
GSNPAFRAAPPQSRIHPALRSFADECRETVMRILAYVGALALIGLIIFTAANPLTDAAI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHE
TAATTPGDRPGWSMATHSHPAFAVSQIDLPGAVASTEILRHPDGGRKDVLRWAAPGQAPA
EEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCE
VEIELYRLGDEAHGVPDAAADLAARIGAERAESAQPAGLIDSKFGPVTLFDLAGPSTRCL
EEEEEEEECCHHCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHH
GFFRRIDDAALRISGWTCQGDSLPQRRAAAACMLDRLVLLTAGGDAALADTFAHAELRRQ
HHHHHHHHHHEEEECEEECCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHC
GCTPAPGQAARADWVFGAQNPRLRGAF
CCCCCCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA