| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747462
Identifier: 86747462
GI number: 86747462
Start: 381907
End: 382299
Strand: Reverse
Name: 86747462
Synonym: RPB_0336
Alternate gene names: NA
Gene position: 382299-381907 (Counterclockwise)
Preceding gene: 86747463
Following gene: 86747460
Centisome position: 7.17
GC content: 67.94
Gene sequence:
>393_bases ATGACCCTGAAATTCCCAGCCGCCCAAACCTGCGCGAAGACGTTTGCGGTGCTGCTCGCGACGGTGGCCGTGGTGGCAAT CGGCGTCGAATCGGCGGATGCGCAGCAGACCAGCAAGAAGCGCGTCTATCGCAGCAGCGACCAGATCCGCTACGGCGACC GCGGCCCGAACTCGTCGTACCAAGCCGGCCCGCGCACCCGCGTCTACGTCACCAAGCGCTCCTGGCTCGACGCCGGCACC GAAGTGCTGCCGGGCGATCGCAAATTCTCCGATTACGCCTTCCCGCCGGGCTATTCCTTCGCCCGCGAAAACGGCCAGCG CCCGCTCGACCGCCAGCCGCTCAACCCGGCCTCCGACCTCGGCGGCTACCCGGAGCGCTTCCCGCTGTACTGA
Upstream 100 bases:
>100_bases GCATATTTGCGCTCGGTGTGGCCGGATTGACCTTGTGGCGCGGCCATGCTGGCGGCTAGAAAGAGGCGTAATTTGCAATG CGCCTGCCGATGAGGACCCG
Downstream 100 bases:
>100_bases GCGGCGCGGGTTCTCATCGGATGCGAAAATGCCCGGCTCAGCCGGGCATTTTTTGTTTCAGGACGTCGTTTCTCTGAAGA ATCGTCATCCAGAGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTLKFPAAQTCAKTFAVLLATVAVVAIGVESADAQQTSKKRVYRSSDQIRYGDRGPNSSYQAGPRTRVYVTKRSWLDAGT EVLPGDRKFSDYAFPPGYSFARENGQRPLDRQPLNPASDLGGYPERFPLY
Sequences:
>Translated_130_residues MTLKFPAAQTCAKTFAVLLATVAVVAIGVESADAQQTSKKRVYRSSDQIRYGDRGPNSSYQAGPRTRVYVTKRSWLDAGT EVLPGDRKFSDYAFPPGYSFARENGQRPLDRQPLNPASDLGGYPERFPLY >Mature_129_residues TLKFPAAQTCAKTFAVLLATVAVVAIGVESADAQQTSKKRVYRSSDQIRYGDRGPNSSYQAGPRTRVYVTKRSWLDAGTE VLPGDRKFSDYAFPPGYSFARENGQRPLDRQPLNPASDLGGYPERFPLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14397; Mature: 14266
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKFPAAQTCAKTFAVLLATVAVVAIGVESADAQQTSKKRVYRSSDQIRYGDRGPNSSY CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCC QAGPRTRVYVTKRSWLDAGTEVLPGDRKFSDYAFPPGYSFARENGQRPLDRQPLNPASDL CCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHC GGYPERFPLY CCCCCCCCCC >Mature Secondary Structure TLKFPAAQTCAKTFAVLLATVAVVAIGVESADAQQTSKKRVYRSSDQIRYGDRGPNSSY CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCC QAGPRTRVYVTKRSWLDAGTEVLPGDRKFSDYAFPPGYSFARENGQRPLDRQPLNPASDL CCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHC GGYPERFPLY CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA