| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is proB
Identifier: 86747378
GI number: 86747378
Start: 285115
End: 286245
Strand: Direct
Name: proB
Synonym: RPB_0252
Alternate gene names: 86747378
Gene position: 285115-286245 (Clockwise)
Preceding gene: 86747377
Following gene: 86747379
Centisome position: 5.35
GC content: 70.56
Gene sequence:
>1131_bases ATGGCCCGCCCGAAGCTCCATGATTTCCGCCGCATCGTCGTCAAGGTCGGCTCCTCGCTGCTGATCGATTCCGGCGCCGG CGAGGTCCGGGCGACATGGCTCGCCGCGCTCGCCGCCGACATCGCCGAGCTGCATCGCGACGGCCGCGACGTGATGATCG TCTCCTCCGGCTCGATCGCGCTCGGCCGCAGCCGACTGAAGCTGCCGCGCGGCGCGCTGAAGCTCGAGGAAAGCCAGGCC GCCGCGGCCGTCGGCCAGATCGCGCTGGCGCGGACCTGGTCGGAAGTGCTGGGCCACCATGGGATCGGCGCTGGGCAGAT CCTGGTGACGCTGCAGGACACCGAGGAGCGGCGGCGCTATCTCAACGCCCGCTCGACCATCGCCAAGCTGCTGGAATGGC GCGCGGTACCGGTGATCAACGAGAACGACACCGTCGCCACCAACGAAATCCGCTACGGCGACAACGACCGCCTCGCCGCG CGGGTCGCGACCATGGCGAGTGCGGATCTCCTGATCCTGCTGTCCGACATCGACGGCCTCTACACCGCCCCGCCCGGCAG CAATCCGGATGCGAAGCTGATCCCGGTGGTCGACTCCGTCACCGCCGAAATCGAGGGCATGGCCGGCGCGGCCGGCTCGG AGCTGTCGCGCGGCGGGATGCGCACCAAGATCGAGGCCGCCAAGATCGCGACCTCGGCCGGCACCCACATGCTGATCGCT TCGGGCAAGATCGACCATCCGCTCAAGGCCATTGCCGGCGGCGGCCCCTGCACCTGGTTCCTGACACCCGCGAACCCGGT GACGGCTCGCAAACGCTGGATCGCGGGTTCTCTGGAGCCGAAGGGCACGCTGACGATCGACGCCGGCGCGGTGACGGCGC TGCGCGCCGGCAAGAGCCTGCTGCCGGCCGGCGTGATCCGGGTCGACGGCCAGTTCGCCCGCGGCGACGCGGTGATCGTG CGCGGCCCGGACACCCACGAAATCGGCCGCGGCTTGGTCGCCTACGACGCCGACGACGCCGACAGGATCAAGGGCCGCTC CTCGCCCGACGTGATGAGCATCCTCGGCGTCAGCGGCCGCGCCGAGATGATCCACCGCGACGATCTGGTGGTGGGAACGG CGCCGGGCTAG
Upstream 100 bases:
>100_bases CCGGCGCGCTTGCACCCGCCGGTTCGGTGCGGCAAAACCAACCCGCCCGTCGACGGCGCGCCGCCGATGCGTCCCGTCCT CGTCTCGCCCGATAGTCCCG
Downstream 100 bases:
>100_bases TCTCGGGCCGCGAATTCCGGGCTGCTGTCGGCGAGGCGCCGCCTGCTGTCAACGCGCGAGTATTCGCCCGGTTTCTCCGC AACCAGCTTGGCGATCCGGC
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MARPKLHDFRRIVVKVGSSLLIDSGAGEVRATWLAALAADIAELHRDGRDVMIVSSGSIALGRSRLKLPRGALKLEESQA AAAVGQIALARTWSEVLGHHGIGAGQILVTLQDTEERRRYLNARSTIAKLLEWRAVPVINENDTVATNEIRYGDNDRLAA RVATMASADLLILLSDIDGLYTAPPGSNPDAKLIPVVDSVTAEIEGMAGAAGSELSRGGMRTKIEAAKIATSAGTHMLIA SGKIDHPLKAIAGGGPCTWFLTPANPVTARKRWIAGSLEPKGTLTIDAGAVTALRAGKSLLPAGVIRVDGQFARGDAVIV RGPDTHEIGRGLVAYDADDADRIKGRSSPDVMSILGVSGRAEMIHRDDLVVGTAPG
Sequences:
>Translated_376_residues MARPKLHDFRRIVVKVGSSLLIDSGAGEVRATWLAALAADIAELHRDGRDVMIVSSGSIALGRSRLKLPRGALKLEESQA AAAVGQIALARTWSEVLGHHGIGAGQILVTLQDTEERRRYLNARSTIAKLLEWRAVPVINENDTVATNEIRYGDNDRLAA RVATMASADLLILLSDIDGLYTAPPGSNPDAKLIPVVDSVTAEIEGMAGAAGSELSRGGMRTKIEAAKIATSAGTHMLIA SGKIDHPLKAIAGGGPCTWFLTPANPVTARKRWIAGSLEPKGTLTIDAGAVTALRAGKSLLPAGVIRVDGQFARGDAVIV RGPDTHEIGRGLVAYDADDADRIKGRSSPDVMSILGVSGRAEMIHRDDLVVGTAPG >Mature_375_residues ARPKLHDFRRIVVKVGSSLLIDSGAGEVRATWLAALAADIAELHRDGRDVMIVSSGSIALGRSRLKLPRGALKLEESQAA AAVGQIALARTWSEVLGHHGIGAGQILVTLQDTEERRRYLNARSTIAKLLEWRAVPVINENDTVATNEIRYGDNDRLAAR VATMASADLLILLSDIDGLYTAPPGSNPDAKLIPVVDSVTAEIEGMAGAAGSELSRGGMRTKIEAAKIATSAGTHMLIAS GKIDHPLKAIAGGGPCTWFLTPANPVTARKRWIAGSLEPKGTLTIDAGAVTALRAGKSLLPAGVIRVDGQFARGDAVIVR GPDTHEIGRGLVAYDADDADRIKGRSSPDVMSILGVSGRAEMIHRDDLVVGTAPG
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
Organism=Homo sapiens, GI21361368, Length=323, Percent_Identity=31.8885448916409, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI62912457, Length=321, Percent_Identity=31.7757009345794, Blast_Score=134, Evalue=2e-31, Organism=Escherichia coli, GI1786437, Length=370, Percent_Identity=41.0810810810811, Blast_Score=249, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17569967, Length=276, Percent_Identity=31.8840579710145, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17569969, Length=276, Percent_Identity=31.8840579710145, Blast_Score=128, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6320506, Length=412, Percent_Identity=33.7378640776699, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321822, Length=411, Percent_Identity=32.360097323601, Blast_Score=186, Evalue=5e-48, Organism=Drosophila melanogaster, GI21357643, Length=293, Percent_Identity=31.740614334471, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_RHOP2 (Q2J3J7)
Other databases:
- EMBL: CP000250 - RefSeq: YP_483874.1 - ProteinModelPortal: Q2J3J7 - SMR: Q2J3J7 - STRING: Q2J3J7 - GeneID: 3907880 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_0252 - eggNOG: COG0263 - HOGENOM: HBG507643 - OMA: TFGDNDM - ProtClustDB: PRK05429 - BioCyc: RPAL316058:RPB_0252-MONOMER - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - SMART: SM00359 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA; SSF53633 Aa_kinase; SSF88697 PUA-like
EC number: =2.7.2.11
Molecular weight: Translated: 39476; Mature: 39345
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00902 GLUTAMATE_5_KINASE; PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPKLHDFRRIVVKVGSSLLIDSGAGEVRATWLAALAADIAELHRDGRDVMIVSSGSIA CCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEE LGRSRLKLPRGALKLEESQAAAAVGQIALARTWSEVLGHHGIGAGQILVTLQDTEERRRY ECHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHH LNARSTIAKLLEWRAVPVINENDTVATNEIRYGDNDRLAARVATMASADLLILLSDIDGL HHHHHHHHHHHHHCCCEEECCCCCEEECEEEECCCCHHHHHHHHHCCCCEEEEEECCCCC YTAPPGSNPDAKLIPVVDSVTAEIEGMAGAAGSELSRGGMRTKIEAAKIATSAGTHMLIA EECCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHCCCCCEEEHHHHHECCCCCEEEEE SGKIDHPLKAIAGGGPCTWFLTPANPVTARKRWIAGSLEPKGTLTIDAGAVTALRAGKSL CCCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHEECCCCCCCEEEECCCCHHHHHCCCCC LPAGVIRVDGQFARGDAVIVRGPDTHEIGRGLVAYDADDADRIKGRSSPDVMSILGVSGR CCCCEEEECCEEECCCEEEEECCCCHHHCCCEEEECCCCHHHHCCCCCCCHHHHHCCCCC AEMIHRDDLVVGTAPG HHEEECCCEEEECCCC >Mature Secondary Structure ARPKLHDFRRIVVKVGSSLLIDSGAGEVRATWLAALAADIAELHRDGRDVMIVSSGSIA CCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEE LGRSRLKLPRGALKLEESQAAAAVGQIALARTWSEVLGHHGIGAGQILVTLQDTEERRRY ECHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHH LNARSTIAKLLEWRAVPVINENDTVATNEIRYGDNDRLAARVATMASADLLILLSDIDGL HHHHHHHHHHHHHCCCEEECCCCCEEECEEEECCCCHHHHHHHHHCCCCEEEEEECCCCC YTAPPGSNPDAKLIPVVDSVTAEIEGMAGAAGSELSRGGMRTKIEAAKIATSAGTHMLIA EECCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHCCCCCEEEHHHHHECCCCCEEEEE SGKIDHPLKAIAGGGPCTWFLTPANPVTARKRWIAGSLEPKGTLTIDAGAVTALRAGKSL CCCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHEECCCCCCCEEEECCCCHHHHHCCCCC LPAGVIRVDGQFARGDAVIVRGPDTHEIGRGLVAYDADDADRIKGRSSPDVMSILGVSGR CCCCEEEECCEEECCCEEEEECCCCHHHCCCEEEECCCCHHHHCCCCCCCHHHHHCCCCC AEMIHRDDLVVGTAPG HHEEECCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA