| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747208
Identifier: 86747208
GI number: 86747208
Start: 83751
End: 84722
Strand: Direct
Name: 86747208
Synonym: RPB_0081
Alternate gene names: NA
Gene position: 83751-84722 (Clockwise)
Preceding gene: 86747206
Following gene: 86747210
Centisome position: 1.57
GC content: 69.44
Gene sequence:
>972_bases ATGAGCCGGTTCCGGTTGACCGCAGCAAGCCGGCCGGCCACGGTGCCCCGCCATTCCAGCCCAGATCCGTTCATGCTCAC AGCCGCCTCGCTCTGGATTCCGTTCGCGCTCGTCGCCGCCGTCGGCCAGGTCGCGCGCAATGCGATGCAGCGCTCGCTGA CCGGGCCGCTCGGCACCTGGGGCGCGACCAACATCCGCTTCCTGTTCGGATTTCCGTTCTCGATCCTGTTCCTCGGCGTG GTGATCGCGGCGACCGGCGACGCGCTGCCGTGGCCGGGCCTCGATTTCTGGCCGTGGCTGCTGCTCGGCGCGCTGTCGCA GATCGCCGCCACCGGCCTGATGCTGGCGGCGATGAACGAGCGCTCCTTCGTCGTCACCACCGCCTATCTGAAGACCGAGG CGATCCAGACCGCGATCTTCGGCTTCGTCTTCCTCGGCGATCATCTCACCGTGCTGAAGGTCGGCGCGATCCTGATCGCC ACTTTCGGCGTGGTGATCACCGCGTTGCGGCCCGGCAGCGCGCGCAACCTCGCCAGCCTGCGACCGACGGCGCTCGGGCT CGCCGCTGCCGCCGGCTTCGCGCTGTCGGCGGTCGGCTTTCGCGGCGCCATCATCGTGGTGCCGGGCGTCGGCTTCGTCA CCGCGGCGACGTTCACCCTCGTCTTCGCCCTCGGCGTGCAGACGCTGGTGCTGACGATCTATCTGCTGGCGCGCGCGCCG CAGGTGCTGCGCGATATCCTGCATCTGTGGAAGCCGTCGATGCTTGCGGGCTTCGTCGGCGCCGCGGCCTCGCAGTTCTG GTTCCTCGCCTTCGCGCTCACCGCCGCCGCCAATGTCCGCACGCTGGCCCTGGTCGAAGTGCTGTTCGCGCAGGCCGTCG CCACCTACTCGTTCAAGCAGCCGATGTCGGCGCGCGAACTCGGCGGCATCGCGCTGATCGTGCTCGGGGTCGCGTTGCTG GTCGCGGTGTGA
Upstream 100 bases:
>100_bases GCAAGGCAGCGCAGCATGGCGTCACTCCCGGTCGGGCTCCGACAAGAGTGTAGCGCCAAATCGTCCGGGCGCCAGCGCGG CGCCAGCGCGCAACGCTGGC
Downstream 100 bases:
>100_bases CCCGAGCGCACCGCGCCGGCGAAACTAGACTGATTGAAGCAATGCGGCCTTCTCGCGCGCAGAATCGTCATCCTGAGGTG CGCGCGTAGCGCGCCTCGAA
Product: DMT family permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSRFRLTAASRPATVPRHSSPDPFMLTAASLWIPFALVAAVGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSILFLGV VIAATGDALPWPGLDFWPWLLLGALSQIAATGLMLAAMNERSFVVTTAYLKTEAIQTAIFGFVFLGDHLTVLKVGAILIA TFGVVITALRPGSARNLASLRPTALGLAAAAGFALSAVGFRGAIIVVPGVGFVTAATFTLVFALGVQTLVLTIYLLARAP QVLRDILHLWKPSMLAGFVGAAASQFWFLAFALTAAANVRTLALVEVLFAQAVATYSFKQPMSARELGGIALIVLGVALL VAV
Sequences:
>Translated_323_residues MSRFRLTAASRPATVPRHSSPDPFMLTAASLWIPFALVAAVGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSILFLGV VIAATGDALPWPGLDFWPWLLLGALSQIAATGLMLAAMNERSFVVTTAYLKTEAIQTAIFGFVFLGDHLTVLKVGAILIA TFGVVITALRPGSARNLASLRPTALGLAAAAGFALSAVGFRGAIIVVPGVGFVTAATFTLVFALGVQTLVLTIYLLARAP QVLRDILHLWKPSMLAGFVGAAASQFWFLAFALTAAANVRTLALVEVLFAQAVATYSFKQPMSARELGGIALIVLGVALL VAV >Mature_322_residues SRFRLTAASRPATVPRHSSPDPFMLTAASLWIPFALVAAVGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSILFLGVV IAATGDALPWPGLDFWPWLLLGALSQIAATGLMLAAMNERSFVVTTAYLKTEAIQTAIFGFVFLGDHLTVLKVGAILIAT FGVVITALRPGSARNLASLRPTALGLAAAAGFALSAVGFRGAIIVVPGVGFVTAATFTLVFALGVQTLVLTIYLLARAPQ VLRDILHLWKPSMLAGFVGAAASQFWFLAFALTAAANVRTLALVEVLFAQAVATYSFKQPMSARELGGIALIVLGVALLV AV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33929; Mature: 33798
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFRLTAASRPATVPRHSSPDPFMLTAASLWIPFALVAAVGQVARNAMQRSLTGPLGTW CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GATNIRFLFGFPFSILFLGVVIAATGDALPWPGLDFWPWLLLGALSQIAATGLMLAAMNE CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECC RSFVVTTAYLKTEAIQTAIFGFVFLGDHLTVLKVGAILIATFGVVITALRPGSARNLASL CCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC RPTALGLAAAAGFALSAVGFRGAIIVVPGVGFVTAATFTLVFALGVQTLVLTIYLLARAP CHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH QVLRDILHLWKPSMLAGFVGAAASQFWFLAFALTAAANVRTLALVEVLFAQAVATYSFKQ HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC PMSARELGGIALIVLGVALLVAV CCCHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure SRFRLTAASRPATVPRHSSPDPFMLTAASLWIPFALVAAVGQVARNAMQRSLTGPLGTW CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GATNIRFLFGFPFSILFLGVVIAATGDALPWPGLDFWPWLLLGALSQIAATGLMLAAMNE CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECC RSFVVTTAYLKTEAIQTAIFGFVFLGDHLTVLKVGAILIATFGVVITALRPGSARNLASL CCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC RPTALGLAAAAGFALSAVGFRGAIIVVPGVGFVTAATFTLVFALGVQTLVLTIYLLARAP CHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH QVLRDILHLWKPSMLAGFVGAAASQFWFLAFALTAAANVRTLALVEVLFAQAVATYSFKQ HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC PMSARELGGIALIVLGVALLVAV CCCHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA