Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is yxiO [H]

Identifier: 86747210

GI number: 86747210

Start: 86769

End: 88157

Strand: Direct

Name: yxiO [H]

Synonym: RPB_0083

Alternate gene names: 86747210

Gene position: 86769-88157 (Clockwise)

Preceding gene: 86747208

Following gene: 86747214

Centisome position: 1.63

GC content: 68.32

Gene sequence:

>1389_bases
ATGACGTCATCGACCGCGGCGGACCACTCGCGAGAGAGTGTGCCGAGAACCTATCCGTCGCGCGCCGCGGTCGGCGGCTG
GATCCTGTTCGACTGGGCGGCGCAGCCCTATTTCACGCTGATCACCACCTTCATCTTTGCGCCCTATTTCGCCACTTACG
TCGCGCCCGATCCCGCCACCGGGCAATCGCTGTGGGGCTTCGCGACGGCGGCGAGCGGGCTGTTGATTGCTTTGGCCTCG
CCGATCCTCGGCGCGGTCGCCGATGCGAGCGGCCGGCGCAAGCCGTGGATCGCGGTGTTCGGCGCGATGCTGGTGATCGG
CTCGTCACTGATGTGGTTCGGCCGGCCGGGCGATGCCGGCGTGATCCTGCCGCTGCTGATCGCCTACGCGATCGCGACCA
TCGGGGTCGAATTCGCCACCGTGTTCAACAACGCGATGATGCCGAACCTGGTGCCGCCGGAGAAAATCGGCCGGCTGTCC
GGCACCGGCTGGGCCACCGGCTATGTCGGCGGCATTCTCTCGCTGATTCTCGTGCTCGGCTTCCTCGCCGCCAACCCGCA
GACCGGCAAGACGCTGATCGGCGTCACGCCGCTGTTCGGGCTCGACGCGGCGAGCCACGAGGGCGACCGCATCACCGGCC
CGCTCACCGGGCTGTGGTTTATGGTGTTCGTGCTGCCGATGTTTCTGCTGACGCCGGATTTTCCGGCCAAGCTGTCGGTG
AAGGCGGCGGTCGGCGAGGGCCTGCGCGAATTGCGCGAGACGCTGCGCGACCTGCCGCAGCGGCGCTCGCTCGCCTCCTT
CCTGCTCGCCAACATGATCTACACCGACGGGCTCGTCTCGCTGTTCGCCTTCGGCGGCATCTACGCCACCGGCACGTTCG
GCTGGGGCACCATCCAGATCGGCAGCTTCGGCGTGATTCTGGCGATCGCCGCGACCTTCGGGGCGTTCATCGGCGGCCGG
CTTGACGACGCGCTCGGATCGAAGCGCGTGATCGCCGGATCGATCGTGCTGCTGCTGATCGCGATCAGCGGCATCCTGCT
GATCGATCCGTCGCATATCCTGTTCGTCGAGGTGACGCCGCCGCAGCCGGGCGGCGCTCTGTTCGCCGCCCCCGCCGAGC
GCGCTTATCTGCTGCTCGGCTGCCTGATCGGCATCGCCGGCGGGCCGCTGCAGGCGGCGTCGCGGACGCTGCTGATCCGC
ATCGCCCCGCGCGACCGCATCGCGCAATATTTCGGCCTGTTCGCGCTGACCGGCAAGGTCACGTCGTTCGTCGGCCCGCT
GCTGATCGCCACCGTCACCGCCATCACCGCGAGCCAGAAGGCCGGCATGGCGGTGCTGGTGCTGTTCTTCGTCGGCGGCC
TGGCGCTGCTGACGCGGGTGCGGAATTAG

Upstream 100 bases:

>100_bases
GGTTTCCGACGGTGCAAGTGTTGTGCTGTCCTGCATGCCGGAATCCTATAGTGGTTTCGGCGCGGCGCGCCAAACGCCGG
TCGGGAACGAGGAACACAAG

Downstream 100 bases:

>100_bases
TTAGAGGCGAAGCATCCCACCAGATAACGACGTCATCGCCCGGCTCGACCGGGCGACCCAGTACGCCGCAGCTTTGCAGA
AGGACTGCGGCGCCCTGGAA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MTSSTAADHSRESVPRTYPSRAAVGGWILFDWAAQPYFTLITTFIFAPYFATYVAPDPATGQSLWGFATAASGLLIALAS
PILGAVADASGRRKPWIAVFGAMLVIGSSLMWFGRPGDAGVILPLLIAYAIATIGVEFATVFNNAMMPNLVPPEKIGRLS
GTGWATGYVGGILSLILVLGFLAANPQTGKTLIGVTPLFGLDAASHEGDRITGPLTGLWFMVFVLPMFLLTPDFPAKLSV
KAAVGEGLRELRETLRDLPQRRSLASFLLANMIYTDGLVSLFAFGGIYATGTFGWGTIQIGSFGVILAIAATFGAFIGGR
LDDALGSKRVIAGSIVLLLIAISGILLIDPSHILFVEVTPPQPGGALFAAPAERAYLLLGCLIGIAGGPLQAASRTLLIR
IAPRDRIAQYFGLFALTGKVTSFVGPLLIATVTAITASQKAGMAVLVLFFVGGLALLTRVRN

Sequences:

>Translated_462_residues
MTSSTAADHSRESVPRTYPSRAAVGGWILFDWAAQPYFTLITTFIFAPYFATYVAPDPATGQSLWGFATAASGLLIALAS
PILGAVADASGRRKPWIAVFGAMLVIGSSLMWFGRPGDAGVILPLLIAYAIATIGVEFATVFNNAMMPNLVPPEKIGRLS
GTGWATGYVGGILSLILVLGFLAANPQTGKTLIGVTPLFGLDAASHEGDRITGPLTGLWFMVFVLPMFLLTPDFPAKLSV
KAAVGEGLRELRETLRDLPQRRSLASFLLANMIYTDGLVSLFAFGGIYATGTFGWGTIQIGSFGVILAIAATFGAFIGGR
LDDALGSKRVIAGSIVLLLIAISGILLIDPSHILFVEVTPPQPGGALFAAPAERAYLLLGCLIGIAGGPLQAASRTLLIR
IAPRDRIAQYFGLFALTGKVTSFVGPLLIATVTAITASQKAGMAVLVLFFVGGLALLTRVRN
>Mature_461_residues
TSSTAADHSRESVPRTYPSRAAVGGWILFDWAAQPYFTLITTFIFAPYFATYVAPDPATGQSLWGFATAASGLLIALASP
ILGAVADASGRRKPWIAVFGAMLVIGSSLMWFGRPGDAGVILPLLIAYAIATIGVEFATVFNNAMMPNLVPPEKIGRLSG
TGWATGYVGGILSLILVLGFLAANPQTGKTLIGVTPLFGLDAASHEGDRITGPLTGLWFMVFVLPMFLLTPDFPAKLSVK
AAVGEGLRELRETLRDLPQRRSLASFLLANMIYTDGLVSLFAFGGIYATGTFGWGTIQIGSFGVILAIAATFGAFIGGRL
DDALGSKRVIAGSIVLLLIAISGILLIDPSHILFVEVTPPQPGGALFAAPAERAYLLLGCLIGIAGGPLQAASRTLLIRI
APRDRIAQYFGLFALTGKVTSFVGPLLIATVTAITASQKAGMAVLVLFFVGGLALLTRVRN

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48421; Mature: 48289

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSTAADHSRESVPRTYPSRAAVGGWILFDWAAQPYFTLITTFIFAPYFATYVAPDPAT
CCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GQSLWGFATAASGLLIALASPILGAVADASGRRKPWIAVFGAMLVIGSSLMWFGRPGDAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCC
VILPLLIAYAIATIGVEFATVFNNAMMPNLVPPEKIGRLSGTGWATGYVGGILSLILVLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH
FLAANPQTGKTLIGVTPLFGLDAASHEGDRITGPLTGLWFMVFVLPMFLLTPDFPAKLSV
HHHCCCCCCCEEEEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEH
KAAVGEGLRELRETLRDLPQRRSLASFLLANMIYTDGLVSLFAFGGIYATGTFGWGTIQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEE
GSFGVILAIAATFGAFIGGRLDDALGSKRVIAGSIVLLLIAISGILLIDPSHILFVEVTP
CCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEEEECC
PQPGGALFAAPAERAYLLLGCLIGIAGGPLQAASRTLLIRIAPRDRIAQYFGLFALTGKV
CCCCCCEEECCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH
TSFVGPLLIATVTAITASQKAGMAVLVLFFVGGLALLTRVRN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSSTAADHSRESVPRTYPSRAAVGGWILFDWAAQPYFTLITTFIFAPYFATYVAPDPAT
CCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GQSLWGFATAASGLLIALASPILGAVADASGRRKPWIAVFGAMLVIGSSLMWFGRPGDAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCC
VILPLLIAYAIATIGVEFATVFNNAMMPNLVPPEKIGRLSGTGWATGYVGGILSLILVLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH
FLAANPQTGKTLIGVTPLFGLDAASHEGDRITGPLTGLWFMVFVLPMFLLTPDFPAKLSV
HHHCCCCCCCEEEEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEH
KAAVGEGLRELRETLRDLPQRRSLASFLLANMIYTDGLVSLFAFGGIYATGTFGWGTIQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEE
GSFGVILAIAATFGAFIGGRLDDALGSKRVIAGSIVLLLIAISGILLIDPSHILFVEVTP
CCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEEEECC
PQPGGALFAAPAERAYLLLGCLIGIAGGPLQAASRTLLIRIAPRDRIAQYFGLFALTGKV
CCCCCCEEECCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH
TSFVGPLLIATVTAITASQKAGMAVLVLFFVGGLALLTRVRN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]