| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is mprA [H]
Identifier: 86609935
GI number: 86609935
Start: 2595567
End: 2596268
Strand: Direct
Name: mprA [H]
Synonym: CYB_2501
Alternate gene names: 86609935
Gene position: 2595567-2596268 (Clockwise)
Preceding gene: 86609934
Following gene: 86609937
Centisome position: 85.19
GC content: 62.39
Gene sequence:
>702_bases ATGGCACGGATTTTATTGGTGGACGATGAAGTGGAGTTGGCCGATTCTCTGGCCCAGCAACTGAGGCGAGAGGGCTACAC GGTGGACGTGGCCTACACGGGGGGGCGAGCCTGGGAACTGCTGCAAAAGACGGGATCCCTGCCCTACAATCTGCTGGTCT TGGATTGGATGTTGCCGGAGCTCTCCGGGCTTTCCCTCTGTCAGCGGGTACGGCAGGTGGATTGCACCACCCCTATCCTG TTTCTGACGGCCAAAGATACCCTAGACGACCGGGTGGAAGGGCTGGATGCCGGGGCAGATGATTACTTGGTGAAGCCGTT CGAGCTGCGGGAACTGCTGGCGCGGGTGCGGGCCCTCTTGCGGCGAACCACAGGTACTGGAGAAGGGATCCCTCGCCTAC AGATAGGGGATTTGGAGCTGGATCGGGAGAACCAGGTGGCCTACCGGCAGGGGCGGATGATCCACCTCTCCCAAAAAGAG TTTCGCCTGCTGGAGTACTTCATGACCCACCCCGGCCAGTTGCTCACCCACGACCAGATCTACGAGCAGGTGTGGGCCGG AGAGGATCCCCCCAGCAGCAACGTCTTGGCAGCCCAGGTGCGCCTGCTGCGGCGCCGCCTCAGGTTGCCCGGGGCAGCAG AATTGATCCACGCCGTCTACGGCAAGGGCTATCGCTTCGGGCCTGTCGCCGGGGATCCCTAG
Upstream 100 bases:
>100_bases GGGACGGAGTCCTTTTCTGAGTACGTCAGCGCTCCACATTGTTTCCAAGACAACAGCGAGACCGAGTCCTGAGGTGTTCG CGTTAGCGGGACGGAGTCCT
Downstream 100 bases:
>100_bases CAGCCGTCCCACCTGTAGATAAAACCAAGGCTCCCCCGAAAAGAAGGAGCCCTGCCGGGTCTGGGGAGCGCTTTCAGTCA GCAATGCCACCAGGGCGTTC
Product: DNA-binding response regulator
Products: NA
Alternate protein names: Mycobacterial persistence regulator A [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MARILLVDDEVELADSLAQQLRREGYTVDVAYTGGRAWELLQKTGSLPYNLLVLDWMLPELSGLSLCQRVRQVDCTTPIL FLTAKDTLDDRVEGLDAGADDYLVKPFELRELLARVRALLRRTTGTGEGIPRLQIGDLELDRENQVAYRQGRMIHLSQKE FRLLEYFMTHPGQLLTHDQIYEQVWAGEDPPSSNVLAAQVRLLRRRLRLPGAAELIHAVYGKGYRFGPVAGDP
Sequences:
>Translated_233_residues MARILLVDDEVELADSLAQQLRREGYTVDVAYTGGRAWELLQKTGSLPYNLLVLDWMLPELSGLSLCQRVRQVDCTTPIL FLTAKDTLDDRVEGLDAGADDYLVKPFELRELLARVRALLRRTTGTGEGIPRLQIGDLELDRENQVAYRQGRMIHLSQKE FRLLEYFMTHPGQLLTHDQIYEQVWAGEDPPSSNVLAAQVRLLRRRLRLPGAAELIHAVYGKGYRFGPVAGDP >Mature_232_residues ARILLVDDEVELADSLAQQLRREGYTVDVAYTGGRAWELLQKTGSLPYNLLVLDWMLPELSGLSLCQRVRQVDCTTPILF LTAKDTLDDRVEGLDAGADDYLVKPFELRELLARVRALLRRTTGTGEGIPRLQIGDLELDRENQVAYRQGRMIHLSQKEF RLLEYFMTHPGQLLTHDQIYEQVWAGEDPPSSNVLAAQVRLLRRRLRLPGAAELIHAVYGKGYRFGPVAGDP
Specific function: Member of the two-component regulatory system mprB/mprA which contributes to maintaining a balance among several systems involved in stress resistance and is required for establishment and maintenance of persistent infection in the host. Functions as a tr
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=39.9103139013453, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=37.3333333333333, Blast_Score=137, Evalue=6e-34, Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=39.1891891891892, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=35.6828193832599, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=34.051724137931, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=32.3144104803493, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=34.9344978165939, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1790860, Length=205, Percent_Identity=34.1463414634146, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=31.6964285714286, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=34.3612334801762, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI2367329, Length=213, Percent_Identity=36.150234741784, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=30.3030303030303, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=32.8947368421053, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI145693140, Length=242, Percent_Identity=27.6859504132231, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1790437, Length=128, Percent_Identity=29.6875, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788550, Length=112, Percent_Identity=31.25, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26371; Mature: 26239
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARILLVDDEVELADSLAQQLRREGYTVDVAYTGGRAWELLQKTGSLPYNLLVLDWMLPE CEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHC LSGLSLCQRVRQVDCTTPILFLTAKDTLDDRVEGLDAGADDYLVKPFELRELLARVRALL CCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHH RRTTGTGEGIPRLQIGDLELDRENQVAYRQGRMIHLSQKEFRLLEYFMTHPGQLLTHDQI HHCCCCCCCCCCEEECCEEECCCCCHHHHCCCEEEECHHHHHHHHHHHHCCCCCCHHHHH YEQVWAGEDPPSSNVLAAQVRLLRRRLRLPGAAELIHAVYGKGYRFGPVAGDP HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCC >Mature Secondary Structure ARILLVDDEVELADSLAQQLRREGYTVDVAYTGGRAWELLQKTGSLPYNLLVLDWMLPE EEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHC LSGLSLCQRVRQVDCTTPILFLTAKDTLDDRVEGLDAGADDYLVKPFELRELLARVRALL CCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHH RRTTGTGEGIPRLQIGDLELDRENQVAYRQGRMIHLSQKEFRLLEYFMTHPGQLLTHDQI HHCCCCCCCCCCEEECCEEECCCCCHHHHCCCEEEECHHHHHHHHHHHHCCCCCCHHHHH YEQVWAGEDPPSSNVLAAQVRLLRRRLRLPGAAELIHAVYGKGYRFGPVAGDP HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA