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The map label for this gene is rsmI [H]

Identifier: 86609934

GI number: 86609934

Start: 2594549

End: 2595538

Strand: Direct

Name: rsmI [H]

Synonym: CYB_2500

Alternate gene names: 86609934

Gene position: 2594549-2595538 (Clockwise)

Preceding gene: 86609930

Following gene: 86609935

Centisome position: 85.16

GC content: 62.22

Gene sequence:

>990_bases
ATGGAACACCCCACCGCCAGCCTTTATTTGGTGGCTACCCCCATCGGCAACCGCGAAGACATCACCCTGCGGGCGCTGCG
GGTTTTGCGGGAAGTGGACTGGGTGGCGGCAGAAGATACTCGCCACTCCGGCCAGCTTCTTAAACATTTTCAAATCTCCG
CCCGCCTCATCAGCTATCACGAGCACAACGCTGCCCAGCGGATCCCGCAACTCCTGAAGTATCTGTCGGCGGGCCAGTCG
GTGGCCCTGATCAGCGATGCCGGCACCCCCGCCATTTCCGATCCGGGAGAAGAGCTGGTGCGTGCCTGCATTCAAGCCGG
GATCCCGGTGATCCCTGTGCCGGGGCCGGTAGCTGCTGTTGCCGCCTTGACCGCTTCGGGCCTGCCTACAGGACGATTCG
TGTTCGAGGGATTTTTACCTCTTAAACCCAGCCAACGACAAGCCCGCCTGCGGCAGTTGGCCCAAGAAGAGCGCACCGTC
GTTCTCTATGAAGCCCCCCATCGCCTGCGCCAAACTCTGCAGGATCTGCTGGATCACTGCGGCCCAGAGCGGCAGATCGT
GCTGGCGCGGGAGCTGACCAAGCTGTATGAGTCCTTCTGGCGGGGATCCCTGGCAGCAGCTCTGGAGCACTGCGCTGCTC
AGCCGCCCCGAGGGGAGTTCACCCTCTTGCTTGAGGGATATGTGGGTGCCGTTCCCAGCCCTAACCCTGCCAGAGGCGGG
ACGGAGTCCTTGAATGGGCGGGGAGACAGTGAATCGGAAGCGGAAATTCGTCAAGAAATGGCCCGATTGCTGGCCGAAGG
CCTGTCCCGGTCTGCAGCCAGCCGCCGGTTGGCCCAGCGTCTGCAGGGATCCCCCATCTGGACGCGGCGCCGCCTTTACA
ATCTATCCTTGCAGCTTGAGCCGCTCCCCAGTTCTGGCGGGACGGAGTCCTTTTCTGAGTACGTCAGCGCTCCACATTGT
TTCCAAGACAACAGCGAGACCGAGTCCTGA

Upstream 100 bases:

>100_bases
GGCACCGGCCAAGAGAGGTTAATCTGGGGATCCGAGGCGATCTCTAATTGCTCTAATTGGCTATTGTCTGGTTATCGGCA
GCTCAGCCTTGGAGCTCGGG

Downstream 100 bases:

>100_bases
GGTGTTCGCGTTAGCGGGACGGAGTCCTATGGCACGGATTTTATTGGTGGACGATGAAGTGGAGTTGGCCGATTCTCTGG
CCCAGCAACTGAGGCGAGAG

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MEHPTASLYLVATPIGNREDITLRALRVLREVDWVAAEDTRHSGQLLKHFQISARLISYHEHNAAQRIPQLLKYLSAGQS
VALISDAGTPAISDPGEELVRACIQAGIPVIPVPGPVAAVAALTASGLPTGRFVFEGFLPLKPSQRQARLRQLAQEERTV
VLYEAPHRLRQTLQDLLDHCGPERQIVLARELTKLYESFWRGSLAAALEHCAAQPPRGEFTLLLEGYVGAVPSPNPARGG
TESLNGRGDSESEAEIRQEMARLLAEGLSRSAASRRLAQRLQGSPIWTRRRLYNLSLQLEPLPSSGGTESFSEYVSAPHC
FQDNSETES

Sequences:

>Translated_329_residues
MEHPTASLYLVATPIGNREDITLRALRVLREVDWVAAEDTRHSGQLLKHFQISARLISYHEHNAAQRIPQLLKYLSAGQS
VALISDAGTPAISDPGEELVRACIQAGIPVIPVPGPVAAVAALTASGLPTGRFVFEGFLPLKPSQRQARLRQLAQEERTV
VLYEAPHRLRQTLQDLLDHCGPERQIVLARELTKLYESFWRGSLAAALEHCAAQPPRGEFTLLLEGYVGAVPSPNPARGG
TESLNGRGDSESEAEIRQEMARLLAEGLSRSAASRRLAQRLQGSPIWTRRRLYNLSLQLEPLPSSGGTESFSEYVSAPHC
FQDNSETES
>Mature_329_residues
MEHPTASLYLVATPIGNREDITLRALRVLREVDWVAAEDTRHSGQLLKHFQISARLISYHEHNAAQRIPQLLKYLSAGQS
VALISDAGTPAISDPGEELVRACIQAGIPVIPVPGPVAAVAALTASGLPTGRFVFEGFLPLKPSQRQARLRQLAQEERTV
VLYEAPHRLRQTLQDLLDHCGPERQIVLARELTKLYESFWRGSLAAALEHCAAQPPRGEFTLLLEGYVGAVPSPNPARGG
TESLNGRGDSESEAEIRQEMARLLAEGLSRSAASRRLAQRLQGSPIWTRRRLYNLSLQLEPLPSSGGTESFSEYVSAPHC
FQDNSETES

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=228, Percent_Identity=49.5614035087719, Blast_Score=224, Evalue=5e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 36090; Mature: 36090

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHPTASLYLVATPIGNREDITLRALRVLREVDWVAAEDTRHSGQLLKHFQISARLISYH
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EHNAAQRIPQLLKYLSAGQSVALISDAGTPAISDPGEELVRACIQAGIPVIPVPGPVAAV
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHH
AALTASGLPTGRFVFEGFLPLKPSQRQARLRQLAQEERTVVLYEAPHRLRQTLQDLLDHC
HHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC
GPERQIVLARELTKLYESFWRGSLAAALEHCAAQPPRGEFTLLLEGYVGAVPSPNPARGG
CCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC
TESLNGRGDSESEAEIRQEMARLLAEGLSRSAASRRLAQRLQGSPIWTRRRLYNLSLQLE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEEE
PLPSSGGTESFSEYVSAPHCFQDNSETES
ECCCCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEHPTASLYLVATPIGNREDITLRALRVLREVDWVAAEDTRHSGQLLKHFQISARLISYH
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EHNAAQRIPQLLKYLSAGQSVALISDAGTPAISDPGEELVRACIQAGIPVIPVPGPVAAV
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHH
AALTASGLPTGRFVFEGFLPLKPSQRQARLRQLAQEERTVVLYEAPHRLRQTLQDLLDHC
HHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHC
GPERQIVLARELTKLYESFWRGSLAAALEHCAAQPPRGEFTLLLEGYVGAVPSPNPARGG
CCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC
TESLNGRGDSESEAEIRQEMARLLAEGLSRSAASRRLAQRLQGSPIWTRRRLYNLSLQLE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEEE
PLPSSGGTESFSEYVSAPHCFQDNSETES
ECCCCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]